| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692069
Identifier: 213692069
GI number: 213692069
Start: 1371670
End: 1372128
Strand: Reverse
Name: 213692069
Synonym: Blon_1187
Alternate gene names: NA
Gene position: 1372128-1371670 (Counterclockwise)
Preceding gene: 213692070
Following gene: 213692066
Centisome position: 48.44
GC content: 65.36
Gene sequence:
>459_bases ATGGTCATGGACAGGAACAACAGGAGCCACAGGCCGAAGGGAACGCCCGACGGCGGCCGGTACGAGCCGAAGAACGCCGC CGGCGTATCGGGGGATGTGGCCGCGCCCCGGAACACGCCGGACCCGCATGATCTGGCCGCGATCTTCGACCGGCCGGACC TGGCCCGCCAAATCGACTTCACGCTCGCGGACGGCAGCCATGTCAACGGGTACGCGATGGACTGCGAACGCCTCCCCCGC GAGCATGTGCCCGCCGGGTGGCATGTGTACGCGATCATGGAAAGCGAATCCGACGACGACGATCTGGACATCATGACCAT CAGGGAGAACACGTGGGTGAATCATCGCATGGATTTCGCCACCGACCGGGACCTGACCGGCGTCATCGACGATCCCTCGT TGGAGAACGTGGCGGACTGGGGGTTCACCGACCGGACGCTTGCCGACGATCTCGCCTGA
Upstream 100 bases:
>100_bases GTGCTGCGCGACCGGTATCCGGACGATTCCGACATGCATGCCATACTGGCCGGCAATCCGGTCCTGAGCGGCCTGCGCTG AAAAGGAAAGGAAAACCATC
Downstream 100 bases:
>100_bases TATGGAAACCGCGACGGCCCCGCATTCCGGAAGGGAGGCGGGGCCGTCGCGCATGCATTGCGGCCGTGAAGACGCGCCCC GGACTATCCGACCCCATCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MVMDRNNRSHRPKGTPDGGRYEPKNAAGVSGDVAAPRNTPDPHDLAAIFDRPDLARQIDFTLADGSHVNGYAMDCERLPR EHVPAGWHVYAIMESESDDDDLDIMTIRENTWVNHRMDFATDRDLTGVIDDPSLENVADWGFTDRTLADDLA
Sequences:
>Translated_152_residues MVMDRNNRSHRPKGTPDGGRYEPKNAAGVSGDVAAPRNTPDPHDLAAIFDRPDLARQIDFTLADGSHVNGYAMDCERLPR EHVPAGWHVYAIMESESDDDDLDIMTIRENTWVNHRMDFATDRDLTGVIDDPSLENVADWGFTDRTLADDLA >Mature_152_residues MVMDRNNRSHRPKGTPDGGRYEPKNAAGVSGDVAAPRNTPDPHDLAAIFDRPDLARQIDFTLADGSHVNGYAMDCERLPR EHVPAGWHVYAIMESESDDDDLDIMTIRENTWVNHRMDFATDRDLTGVIDDPSLENVADWGFTDRTLADDLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16992; Mature: 16992
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVMDRNNRSHRPKGTPDGGRYEPKNAAGVSGDVAAPRNTPDPHDLAAIFDRPDLARQIDF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHEEEE TLADGSHVNGYAMDCERLPREHVPAGWHVYAIMESESDDDDLDIMTIRENTWVNHRMDFA EECCCCCCCCEEECHHHCCHHHCCCCEEEEEEEECCCCCCCEEEEEEECCCCCCCEECCC TDRDLTGVIDDPSLENVADWGFTDRTLADDLA CCCCCEECCCCCCCCCHHHCCCCCCCHHHHCC >Mature Secondary Structure MVMDRNNRSHRPKGTPDGGRYEPKNAAGVSGDVAAPRNTPDPHDLAAIFDRPDLARQIDF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHEEEE TLADGSHVNGYAMDCERLPREHVPAGWHVYAIMESESDDDDLDIMTIRENTWVNHRMDFA EECCCCCCCCEEECHHHCCHHHCCCCEEEEEEEECCCCCCCEEEEEEECCCCCCCEECCC TDRDLTGVIDDPSLENVADWGFTDRTLADDLA CCCCCEECCCCCCCCCHHHCCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA