| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692025
Identifier: 213692025
GI number: 213692025
Start: 1324340
End: 1324735
Strand: Direct
Name: 213692025
Synonym: Blon_1143
Alternate gene names: NA
Gene position: 1324340-1324735 (Clockwise)
Preceding gene: 213691980
Following gene: 213692026
Centisome position: 46.75
GC content: 55.81
Gene sequence:
>396_bases ATGGCAACAAAGATTGAATGGAACAGTTTCGACTATGCGGCAAGAGACGTGCTGGACGAGCTGCTGGACAAGCTAGGGGT CTCCTACCGCGAAATGGAAAACATGACGCAAGGTGAGGTGACCTACAGCCGTATCAGGGATATAAAGATGGGCAACAAGG CCCCTGTGCGCTTGTCTGAATTTCTTATAATCTGCGATGTTTGTGGCGCAGACCCCGTGCAGACCGTCCGGGGCATCATC GCGGAGGCGAAGCGTATCGAAGAAGAGCAAGAGCGCGAGCGTCGCGTGGAGGAGACGAAACGTATCCTCAAGGACGACCC GATGGCGTTGGCCGCCGATATCGATGGGGAGAAGAGCAAGTACGTCGAATACGGCGACGGGGATGACCCGGCATGA
Upstream 100 bases:
>100_bases GCACCTGCCAACAAATAAAGTCAAACGCTTCGGCGTGTTGTCATGTGACAACAGTTCTTGTGCGGCGTTTCTAGCTGCTG TCAGGTGATAACATTTGCAC
Downstream 100 bases:
>100_bases GACACCTACCGTTGAACATGCACGATTCCTACGGCGGCATGCGCATGGCCATCTACGCTGCCGGACTCGACGTAGAGGTG CGCAGCTCTCCCAGCCTACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 131; Mature: 130
Protein sequence:
>131_residues MATKIEWNSFDYAARDVLDELLDKLGVSYREMENMTQGEVTYSRIRDIKMGNKAPVRLSEFLIICDVCGADPVQTVRGII AEAKRIEEEQERERRVEETKRILKDDPMALAADIDGEKSKYVEYGDGDDPA
Sequences:
>Translated_131_residues MATKIEWNSFDYAARDVLDELLDKLGVSYREMENMTQGEVTYSRIRDIKMGNKAPVRLSEFLIICDVCGADPVQTVRGII AEAKRIEEEQERERRVEETKRILKDDPMALAADIDGEKSKYVEYGDGDDPA >Mature_130_residues ATKIEWNSFDYAARDVLDELLDKLGVSYREMENMTQGEVTYSRIRDIKMGNKAPVRLSEFLIICDVCGADPVQTVRGIIA EAKRIEEEQERERRVEETKRILKDDPMALAADIDGEKSKYVEYGDGDDPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14949; Mature: 14818
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATKIEWNSFDYAARDVLDELLDKLGVSYREMENMTQGEVTYSRIRDIKMGNKAPVRLSE CCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHH FLIICDVCGADPVQTVRGIIAEAKRIEEEQERERRVEETKRILKDDPMALAADIDGEKSK HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCC YVEYGDGDDPA EEECCCCCCCC >Mature Secondary Structure ATKIEWNSFDYAARDVLDELLDKLGVSYREMENMTQGEVTYSRIRDIKMGNKAPVRLSE CCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHH FLIICDVCGADPVQTVRGIIAEAKRIEEEQERERRVEETKRILKDDPMALAADIDGEKSK HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCC YVEYGDGDDPA EEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA