BacMap

Definition	Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession	NC_011593
Length	2,832,748

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The map label for this gene is dnaJ [H]

Identifier: 213691980

GI number: 213691980

Start: 1287274

End: 1288419

Strand: Direct

Name: dnaJ [H]

Synonym: Blon_1098

Alternate gene names: 213691980

Gene position: 1287274-1288419 (Clockwise)

Preceding gene: 213691979

Following gene: 213692025

Centisome position: 45.44

GC content: 63.35

Gene sequence:

>1146_bases
GTGGCAGATTATTACGAGACGCTGGGTGTGGAACGCGGCGCCAGTGACGACGAGATCAAGAAGGCATACCGCAAGCTCAG
CCGTAAGTACCACCCCGACATCGCGGGCCCTGAATTCGAGGACAAGTTCAAGGAAGTGAACAACGCCTACGATGTGCTGT
CCAATCCGGACAAGCGCCGCATGTATGATTCGGGCGTCGACCCGAACGATCCGAACGCCGGTGCCGGCGGCTTCTCCGGG
GCGGGCTTCGGCGATATGAGCGACGTGTTCTCCACGTTCTTCGGTTCCGCGTTCGGTGGTGGCTCACAGGGCCCGGTGCC
GCGTACCCAGCCCGGCCGCGACGCCCTGGCCTCCGCGTCCATCGACCTGAAGACCGCCGTGTTCGGCGGCACCGCGCATG
TCAAGATCAATACGTTCTCCCTGTGTCAGGAGTGCGGTGGCTCCGGTGCCCAGGGCGGCGCGCAGCCGGTCACCTGCCCC
GACTGCCACGGCCAGGGATTCATGCAGAAGGTCGTGCGCACCATGCTCGGCCAGATGATGACCTCCGCCCCCTGCGAACG
TTGCGAGGGCCACGGTACCATCATCCAGAACCCGTGCCCCAGCTGCATGGGCCACGGCCGTGTGCGCACCACACGTACCG
TGGGCGTCACCGTGCCCGCCGGCATCAACGACAACGCGCGTCTACGCTTGGCCAATCAGGGCGAAGTGGGTGAGGGCGGC
GGCGCTGCCGGCGACCTGTACATCGACATTCGCATCAAAGCGGATAAGCAGTTCACTCGCGATGGCGACGACCTGCACTG
CTGGATTCAGGTGCCGATGAGCTGGGCCGTGCTCGGCCACGATCTGTCCATTAACACGTTTGACGGTGAGAAGACCGTGT
CCATCCCGGCCGGCTGTCAGCCTGAGGATACGGTGACGCTGAAGGGACTGGGCGTCACGAACATCCGCAACAAGGACGAG
CGTGGCAACCTCATCGCCCACGTCAATGTGCTGATTCCCACCAAGCTCAACGAAACCGAGCGCGGCCTCATCGAACAGTT
CGCCGCCTCGCACGATTCAGGCGCCACGCACGTCTCCCAGGCATCCCGTCCACAGGCTGGCCAAAAGAAAGGCTTCTTCA
GCAAGTTAAAAGACGCACTGAGCTGA

Upstream 100 bases:

>100_bases
AGATATTTGACCGCCTTCCTCTCCGAAGGCCGGACCCAAGACTGACCGCCGTCTGTGGCACAATGACCCGCAGACCAAAC
GAACACAAAGGATCAATCAA

Downstream 100 bases:

>100_bases
GAACGGGTTGGAAAATGGCCGCTTTGCCTTGCGGAAGTAGGGCTGAGCGGCTTTTTTCGTTTTAACCAGTTTTAACGGTT
TTTAACCTGTTTTTACGGAA

Product: chaperone DnaJ domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 380

Protein sequence:

>381_residues
MADYYETLGVERGASDDEIKKAYRKLSRKYHPDIAGPEFEDKFKEVNNAYDVLSNPDKRRMYDSGVDPNDPNAGAGGFSG
AGFGDMSDVFSTFFGSAFGGGSQGPVPRTQPGRDALASASIDLKTAVFGGTAHVKINTFSLCQECGGSGAQGGAQPVTCP
DCHGQGFMQKVVRTMLGQMMTSAPCERCEGHGTIIQNPCPSCMGHGRVRTTRTVGVTVPAGINDNARLRLANQGEVGEGG
GAAGDLYIDIRIKADKQFTRDGDDLHCWIQVPMSWAVLGHDLSINTFDGEKTVSIPAGCQPEDTVTLKGLGVTNIRNKDE
RGNLIAHVNVLIPTKLNETERGLIEQFAASHDSGATHVSQASRPQAGQKKGFFSKLKDALS

Sequences:

>Translated_381_residues
MADYYETLGVERGASDDEIKKAYRKLSRKYHPDIAGPEFEDKFKEVNNAYDVLSNPDKRRMYDSGVDPNDPNAGAGGFSG
AGFGDMSDVFSTFFGSAFGGGSQGPVPRTQPGRDALASASIDLKTAVFGGTAHVKINTFSLCQECGGSGAQGGAQPVTCP
DCHGQGFMQKVVRTMLGQMMTSAPCERCEGHGTIIQNPCPSCMGHGRVRTTRTVGVTVPAGINDNARLRLANQGEVGEGG
GAAGDLYIDIRIKADKQFTRDGDDLHCWIQVPMSWAVLGHDLSINTFDGEKTVSIPAGCQPEDTVTLKGLGVTNIRNKDE
RGNLIAHVNVLIPTKLNETERGLIEQFAASHDSGATHVSQASRPQAGQKKGFFSKLKDALS
>Mature_380_residues
ADYYETLGVERGASDDEIKKAYRKLSRKYHPDIAGPEFEDKFKEVNNAYDVLSNPDKRRMYDSGVDPNDPNAGAGGFSGA
GFGDMSDVFSTFFGSAFGGGSQGPVPRTQPGRDALASASIDLKTAVFGGTAHVKINTFSLCQECGGSGAQGGAQPVTCPD
CHGQGFMQKVVRTMLGQMMTSAPCERCEGHGTIIQNPCPSCMGHGRVRTTRTVGVTVPAGINDNARLRLANQGEVGEGGG
AAGDLYIDIRIKADKQFTRDGDDLHCWIQVPMSWAVLGHDLSINTFDGEKTVSIPAGCQPEDTVTLKGLGVTNIRNKDER
GNLIAHVNVLIPTKLNETERGLIEQFAASHDSGATHVSQASRPQAGQKKGFFSKLKDALS

Specific function: Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion. Unfolded proteins bind initially to dnaJ; upon

COG id: COG0484

COG function: function code O; DnaJ-class molecular chaperone with C-terminal Zn finger domain

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 J domain [H]

Homologues:

Organism=Homo sapiens, GI205360838, Length=405, Percent_Identity=29.8765432098765, Blast_Score=167, Evalue=1e-41,
Organism=Homo sapiens, GI205360840, Length=354, Percent_Identity=30.5084745762712, Blast_Score=163, Evalue=2e-40,
Organism=Homo sapiens, GI4504511, Length=359, Percent_Identity=32.3119777158774, Blast_Score=146, Evalue=3e-35,
Organism=Homo sapiens, GI194328760, Length=341, Percent_Identity=32.5513196480938, Blast_Score=142, Evalue=7e-34,
Organism=Homo sapiens, GI5031741, Length=357, Percent_Identity=31.0924369747899, Blast_Score=141, Evalue=8e-34,
Organism=Homo sapiens, GI194328758, Length=341, Percent_Identity=32.5513196480938, Blast_Score=141, Evalue=8e-34,
Organism=Homo sapiens, GI7706495, Length=359, Percent_Identity=28.133704735376, Blast_Score=102, Evalue=5e-22,
Organism=Homo sapiens, GI194328762, Length=303, Percent_Identity=29.042904290429, Blast_Score=101, Evalue=1e-21,
Organism=Homo sapiens, GI5453690, Length=360, Percent_Identity=26.3888888888889, Blast_Score=99, Evalue=8e-21,
Organism=Homo sapiens, GI6631085, Length=367, Percent_Identity=24.7956403269755, Blast_Score=96, Evalue=7e-20,
Organism=Homo sapiens, GI194306642, Length=103, Percent_Identity=47.5728155339806, Blast_Score=86, Evalue=6e-17,
Organism=Homo sapiens, GI194306640, Length=103, Percent_Identity=47.5728155339806, Blast_Score=86, Evalue=6e-17,
Organism=Homo sapiens, GI72534740, Length=107, Percent_Identity=45.7943925233645, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI22749377, Length=107, Percent_Identity=44.8598130841121, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI201862587, Length=100, Percent_Identity=46, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI201862518, Length=100, Percent_Identity=46, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI56549115, Length=100, Percent_Identity=46, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI27151736, Length=110, Percent_Identity=46.3636363636364, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI88501736, Length=110, Percent_Identity=46.3636363636364, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI23503241, Length=105, Percent_Identity=45.7142857142857, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI4885495, Length=66, Percent_Identity=57.5757575757576, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI17388799, Length=66, Percent_Identity=57.5757575757576, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI68077168, Length=103, Percent_Identity=40.7766990291262, Blast_Score=72, Evalue=6e-13,
Organism=Homo sapiens, GI68077166, Length=103, Percent_Identity=40.7766990291262, Blast_Score=72, Evalue=8e-13,
Organism=Homo sapiens, GI47777312, Length=110, Percent_Identity=45.4545454545455, Blast_Score=72, Evalue=9e-13,
Organism=Homo sapiens, GI21553335, Length=66, Percent_Identity=56.0606060606061, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI45504382, Length=61, Percent_Identity=52.4590163934426, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI29126218, Length=100, Percent_Identity=39, Blast_Score=69, Evalue=8e-12,
Organism=Homo sapiens, GI9558755, Length=62, Percent_Identity=48.3870967741936, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI56687498, Length=62, Percent_Identity=53.2258064516129, Blast_Score=66, Evalue=4e-11,
Organism=Escherichia coli, GI1786197, Length=350, Percent_Identity=38.8571428571429, Blast_Score=247, Evalue=1e-66,
Organism=Escherichia coli, GI1787235, Length=358, Percent_Identity=28.7709497206704, Blast_Score=120, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI17553098, Length=367, Percent_Identity=30.2452316076294, Blast_Score=163, Evalue=1e-40,
Organism=Caenorhabditis elegans, GI17553096, Length=367, Percent_Identity=30.2452316076294, Blast_Score=163, Evalue=2e-40,
Organism=Caenorhabditis elegans, GI17507263, Length=341, Percent_Identity=30.2052785923754, Blast_Score=135, Evalue=4e-32,
Organism=Caenorhabditis elegans, GI17563890, Length=361, Percent_Identity=29.9168975069252, Blast_Score=122, Evalue=3e-28,
Organism=Caenorhabditis elegans, GI17534355, Length=361, Percent_Identity=29.0858725761773, Blast_Score=108, Evalue=5e-24,
Organism=Caenorhabditis elegans, GI212645553, Length=346, Percent_Identity=26.0115606936416, Blast_Score=78, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI17554644, Length=121, Percent_Identity=44.6280991735537, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17568643, Length=63, Percent_Identity=57.1428571428571, Blast_Score=75, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI17538236, Length=113, Percent_Identity=38.0530973451327, Blast_Score=72, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI17551190, Length=80, Percent_Identity=48.75, Blast_Score=71, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI17510335, Length=80, Percent_Identity=46.25, Blast_Score=67, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6324265, Length=353, Percent_Identity=33.9943342776204, Blast_Score=137, Evalue=2e-33,
Organism=Saccharomyces cerevisiae, GI6323870, Length=273, Percent_Identity=34.7985347985348, Blast_Score=128, Evalue=1e-30,
Organism=Saccharomyces cerevisiae, GI6321094, Length=395, Percent_Identity=28.8607594936709, Blast_Score=111, Evalue=1e-25,
Organism=Saccharomyces cerevisiae, GI6323119, Length=400, Percent_Identity=29, Blast_Score=107, Evalue=4e-24,
Organism=Saccharomyces cerevisiae, GI6323813, Length=117, Percent_Identity=47.008547008547, Blast_Score=83, Evalue=9e-17,
Organism=Saccharomyces cerevisiae, GI6324321, Length=143, Percent_Identity=29.3706293706294, Blast_Score=66, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6324103, Length=64, Percent_Identity=53.125, Blast_Score=63, Evalue=9e-11,
Organism=Drosophila melanogaster, GI45549272, Length=389, Percent_Identity=28.5347043701799, Blast_Score=145, Evalue=5e-35,
Organism=Drosophila melanogaster, GI45552813, Length=389, Percent_Identity=28.5347043701799, Blast_Score=145, Evalue=5e-35,
Organism=Drosophila melanogaster, GI45552811, Length=389, Percent_Identity=28.5347043701799, Blast_Score=145, Evalue=5e-35,
Organism=Drosophila melanogaster, GI24646562, Length=343, Percent_Identity=31.1953352769679, Blast_Score=128, Evalue=7e-30,
Organism=Drosophila melanogaster, GI24646560, Length=343, Percent_Identity=31.1953352769679, Blast_Score=128, Evalue=7e-30,
Organism=Drosophila melanogaster, GI24646558, Length=343, Percent_Identity=31.1953352769679, Blast_Score=128, Evalue=7e-30,
Organism=Drosophila melanogaster, GI24646556, Length=343, Percent_Identity=31.1953352769679, Blast_Score=128, Evalue=7e-30,
Organism=Drosophila melanogaster, GI21357547, Length=343, Percent_Identity=31.1953352769679, Blast_Score=128, Evalue=7e-30,
Organism=Drosophila melanogaster, GI20129487, Length=338, Percent_Identity=28.4023668639053, Blast_Score=112, Evalue=4e-25,
Organism=Drosophila melanogaster, GI24584014, Length=338, Percent_Identity=28.4023668639053, Blast_Score=112, Evalue=4e-25,
Organism=Drosophila melanogaster, GI85726398, Length=364, Percent_Identity=26.0989010989011, Blast_Score=99, Evalue=4e-21,
Organism=Drosophila melanogaster, GI19920464, Length=347, Percent_Identity=27.6657060518732, Blast_Score=95, Evalue=8e-20,
Organism=Drosophila melanogaster, GI18858081, Length=353, Percent_Identity=26.9121813031161, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24658562, Length=104, Percent_Identity=46.1538461538462, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24658555, Length=104, Percent_Identity=46.1538461538462, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI21355911, Length=83, Percent_Identity=49.3975903614458, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI17648033, Length=106, Percent_Identity=45.2830188679245, Blast_Score=72, Evalue=5e-13,
Organism=Drosophila melanogaster, GI24584630, Length=106, Percent_Identity=45.2830188679245, Blast_Score=72, Evalue=5e-13,
Organism=Drosophila melanogaster, GI24654066, Length=66, Percent_Identity=50, Blast_Score=72, Evalue=7e-13,
Organism=Drosophila melanogaster, GI24654070, Length=66, Percent_Identity=50, Blast_Score=72, Evalue=7e-13,
Organism=Drosophila melanogaster, GI24654068, Length=66, Percent_Identity=50, Blast_Score=72, Evalue=7e-13,
Organism=Drosophila melanogaster, GI24654072, Length=66, Percent_Identity=50, Blast_Score=72, Evalue=7e-13,
Organism=Drosophila melanogaster, GI161077138, Length=68, Percent_Identity=51.4705882352941, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24668492, Length=62, Percent_Identity=46.7741935483871, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI17737735, Length=62, Percent_Identity=51.6129032258064, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI28574723, Length=62, Percent_Identity=51.6129032258064, Blast_Score=65, Evalue=7e-11,
Organism=Drosophila melanogaster, GI24668523, Length=62, Percent_Identity=51.6129032258064, Blast_Score=65, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012724
- InterPro:   IPR002939
- InterPro:   IPR001623
- InterPro:   IPR018253
- InterPro:   IPR008971
- InterPro:   IPR015609
- InterPro:   IPR003095
- InterPro:   IPR001305 [H]

Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C; PF00684 DnaJ_CXXCXGXG [H]

EC number: NA

Molecular weight: Translated: 40590; Mature: 40459

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: PS00636 DNAJ_1 ; PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADYYETLGVERGASDDEIKKAYRKLSRKYHPDIAGPEFEDKFKEVNNAYDVLSNPDKRR
CCCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHH
MYDSGVDPNDPNAGAGGFSGAGFGDMSDVFSTFFGSAFGGGSQGPVPRTQPGRDALASAS
HHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCC
IDLKTAVFGGTAHVKINTFSLCQECGGSGAQGGAQPVTCPDCHGQGFMQKVVRTMLGQMM
CEEEEEEECCEEEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
TSAPCERCEGHGTIIQNPCPSCMGHGRVRTTRTVGVTVPAGINDNARLRLANQGEVGEGG
HHCCHHHHCCCCCEECCCCCHHHCCCCEEEEEEEEEEECCCCCCCCEEEECCCCCCCCCC
GAAGDLYIDIRIKADKQFTRDGDDLHCWIQVPMSWAVLGHDLSINTFDGEKTVSIPAGCQ
CCCCEEEEEEEEECCCCCCCCCCCEEEEEECCCEEEEEECCEEEEECCCCEEEECCCCCC
PEDTVTLKGLGVTNIRNKDERGNLIAHVNVLIPTKLNETERGLIEQFAASHDSGATHVSQ
CCCCEEEECCCCCCCCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCHHHH
ASRPQAGQKKGFFSKLKDALS
CCCCCCCCHHHHHHHHHHHHC
>Mature Secondary Structure 
ADYYETLGVERGASDDEIKKAYRKLSRKYHPDIAGPEFEDKFKEVNNAYDVLSNPDKRR
CCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHH
MYDSGVDPNDPNAGAGGFSGAGFGDMSDVFSTFFGSAFGGGSQGPVPRTQPGRDALASAS
HHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCC
IDLKTAVFGGTAHVKINTFSLCQECGGSGAQGGAQPVTCPDCHGQGFMQKVVRTMLGQMM
CEEEEEEECCEEEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
TSAPCERCEGHGTIIQNPCPSCMGHGRVRTTRTVGVTVPAGINDNARLRLANQGEVGEGG
HHCCHHHHCCCCCEECCCCCHHHCCCCEEEEEEEEEEECCCCCCCCEEEECCCCCCCCCC
GAAGDLYIDIRIKADKQFTRDGDDLHCWIQVPMSWAVLGHDLSINTFDGEKTVSIPAGCQ
CCCCEEEEEEEEECCCCCCCCCCCEEEEEECCCEEEEEECCEEEEECCCCEEEECCCCCC
PEDTVTLKGLGVTNIRNKDERGNLIAHVNVLIPTKLNETERGLIEQFAASHDSGATHVSQ
CCCCEEEECCCCCCCCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCHHHH
ASRPQAGQKKGFFSKLKDALS
CCCCCCCCHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12381787 [H]