| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692014
Identifier: 213692014
GI number: 213692014
Start: 1319770
End: 1320168
Strand: Reverse
Name: 213692014
Synonym: Blon_1132
Alternate gene names: NA
Gene position: 1320168-1319770 (Counterclockwise)
Preceding gene: 213692015
Following gene: 213692013
Centisome position: 46.6
GC content: 60.9
Gene sequence:
>399_bases ATGAGCGCGGAACTGTCCAGCCTGGGCATCGCCCAGATCGTGGAAAGCGTTATCGCCGACTACGACCTGCGTGACGAGGA CGGCAACGAGCTGACCGACGACCTGTACGTCATCCGTTCCGAGCAGCTCGACGAGCTGGGCCTCACCGTCGCCAGACGCA TCCACAAGGCCATACGCGAACTGGAGACGCAAGGCAAGACCGGCTTCCCCGTGCATTCGATGGCCTTCGGCAGCATGCCG GCAGCCATCGCGAAGGACGGCGACCGCACCTACACGCTGCGCTTCGACAATTCGGACGAGGCGGTGGCTATTACACGGCT CAGCCGGACCGCACTCACGGACATCAAGGAACAGATCAACGAGTTTTTGAAGGAGGTGAAGAACCGTGAGCATGAATGA
Upstream 100 bases:
>100_bases ACCAGTTGCGGCCGCGGCCGCTCAGCCAGTTGGAGAAGCTGCTGTCGGCGGACGCGGTGGCCGATTACGCGATGAGCGGC AAGCCTATGGTGGTGGTCTC
Downstream 100 bases:
>100_bases GGCGGTATTGGCCGTCGCGCAAGCCCAACAGCAGGGTGACGCGATACCCGTCGACGTGCCGCCCATGACGCAGTCGGCGC CCGATATGGGCAAGCCGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 132; Mature: 131
Protein sequence:
>132_residues MSAELSSLGIAQIVESVIADYDLRDEDGNELTDDLYVIRSEQLDELGLTVARRIHKAIRELETQGKTGFPVHSMAFGSMP AAIAKDGDRTYTLRFDNSDEAVAITRLSRTALTDIKEQINEFLKEVKNREHE
Sequences:
>Translated_132_residues MSAELSSLGIAQIVESVIADYDLRDEDGNELTDDLYVIRSEQLDELGLTVARRIHKAIRELETQGKTGFPVHSMAFGSMP AAIAKDGDRTYTLRFDNSDEAVAITRLSRTALTDIKEQINEFLKEVKNREHE >Mature_131_residues SAELSSLGIAQIVESVIADYDLRDEDGNELTDDLYVIRSEQLDELGLTVARRIHKAIRELETQGKTGFPVHSMAFGSMPA AIAKDGDRTYTLRFDNSDEAVAITRLSRTALTDIKEQINEFLKEVKNREHE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14827; Mature: 14696
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAELSSLGIAQIVESVIADYDLRDEDGNELTDDLYVIRSEQLDELGLTVARRIHKAIRE CCCCHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LETQGKTGFPVHSMAFGSMPAAIAKDGDRTYTLRFDNSDEAVAITRLSRTALTDIKEQIN HHHCCCCCCCHHHHHHCCCCHHHHCCCCCEEEEEECCCCCEEHHHHHHHHHHHHHHHHHH EFLKEVKNREHE HHHHHHHCCCCC >Mature Secondary Structure SAELSSLGIAQIVESVIADYDLRDEDGNELTDDLYVIRSEQLDELGLTVARRIHKAIRE CCCHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LETQGKTGFPVHSMAFGSMPAAIAKDGDRTYTLRFDNSDEAVAITRLSRTALTDIKEQIN HHHCCCCCCCHHHHHHCCCCHHHHCCCCCEEEEEECCCCCEEHHHHHHHHHHHHHHHHHH EFLKEVKNREHE HHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA