| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692013
Identifier: 213692013
GI number: 213692013
Start: 1318773
End: 1319705
Strand: Reverse
Name: 213692013
Synonym: Blon_1131
Alternate gene names: NA
Gene position: 1319705-1318773 (Counterclockwise)
Preceding gene: 213692014
Following gene: 213692012
Centisome position: 46.59
GC content: 63.24
Gene sequence:
>933_bases ATGACGCAGTCGGCGCCCGATATGGGCAAGCCGCCGGCAACGCCGAAAACCAAGACGGACACGATGGAGGAACCACGATT GTGGCCGGAGATCCGCCAGCTCATCGAAGCGGATATCCAGAACGCTCCGCGTGAGCTGCAGCGTGAGATAGGCCCGTCCG AACTGGGCACGGACTGCGTGCACTGTCTCGCGGCGAAACTGGCGGGTTGGCCGGAGCGTCGTTCGCCGGGTTGGCTGCCG TTCATCGGCACGTGCGTGCACGCGCACTTCGAGCAGATGTTCCGCGAGCTGAACAGGGAGCCTGCGCACCAGTTCCTCTA CACGAGTGAGGACAGCGTGACCGGACTCGGGGAGCGCTGGCGCAGCGAATATCGCGTCACCGTAGGCCGATTGCAGGGCC TGCACGGCGGCTACGACGTCACCGGTTCGATCGACCTCTGGGATCGCAAGACCCATAGCACCATCGACTGGAAGATCGTC GGCAACACCACGGTCACGAAGGTCAAGGCGCACGGCCCCAGCCAGCAGTATCGTGTGCAGGCCTCGCTCTACGGCATGGG ACTGCAGAACGAGGGCGAACTGGTGGAGCGTAATTGCATCTATTTCCTGCCCCGCAACAAGACCAGTCTGGGTGATGCGT TGCCCTGGGAGACGAGGTTCGGCCCGGAGCCCGGCAAATGGGCGTTGGCCCGAGCCCAACTGCTCGTCAACCTCATGGAC ATCATCGAACAGGCGGACGGCGTGGGCGTGCGCGACAGCTGGATAAAGCAACTGCCCGCGGCGGGCCCCGACAAGTGCTT CTCATGCAAGGGGCGCGTGTGGCCGGATATGAGCGCGCTTCCCGAGTTCGACGAGAAGCCGTGGCCGGACGTGCCCGACA AATGGCTCCAACTCATCCCCCTAATCGAATCCGAATACCAGTTCACCGAATAA
Upstream 100 bases:
>100_bases TTTTTGAAGGAGGTGAAGAACCGTGAGCATGAATGAGGCGGTATTGGCCGTCGCGCAAGCCCAACAGCAGGGTGACGCGA TACCCGTCGACGTGCCGCCC
Downstream 100 bases:
>100_bases CGAAAGGAAACACAATGTTCGGTCAACAACCACAGCAACAGTACGGCTATCCCCAGCAGGGATATCCGCAACAGCAGGCT TACAGCCAGCAGCAGTATGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 310; Mature: 309
Protein sequence:
>310_residues MTQSAPDMGKPPATPKTKTDTMEEPRLWPEIRQLIEADIQNAPRELQREIGPSELGTDCVHCLAAKLAGWPERRSPGWLP FIGTCVHAHFEQMFRELNREPAHQFLYTSEDSVTGLGERWRSEYRVTVGRLQGLHGGYDVTGSIDLWDRKTHSTIDWKIV GNTTVTKVKAHGPSQQYRVQASLYGMGLQNEGELVERNCIYFLPRNKTSLGDALPWETRFGPEPGKWALARAQLLVNLMD IIEQADGVGVRDSWIKQLPAAGPDKCFSCKGRVWPDMSALPEFDEKPWPDVPDKWLQLIPLIESEYQFTE
Sequences:
>Translated_310_residues MTQSAPDMGKPPATPKTKTDTMEEPRLWPEIRQLIEADIQNAPRELQREIGPSELGTDCVHCLAAKLAGWPERRSPGWLP FIGTCVHAHFEQMFRELNREPAHQFLYTSEDSVTGLGERWRSEYRVTVGRLQGLHGGYDVTGSIDLWDRKTHSTIDWKIV GNTTVTKVKAHGPSQQYRVQASLYGMGLQNEGELVERNCIYFLPRNKTSLGDALPWETRFGPEPGKWALARAQLLVNLMD IIEQADGVGVRDSWIKQLPAAGPDKCFSCKGRVWPDMSALPEFDEKPWPDVPDKWLQLIPLIESEYQFTE >Mature_309_residues TQSAPDMGKPPATPKTKTDTMEEPRLWPEIRQLIEADIQNAPRELQREIGPSELGTDCVHCLAAKLAGWPERRSPGWLPF IGTCVHAHFEQMFRELNREPAHQFLYTSEDSVTGLGERWRSEYRVTVGRLQGLHGGYDVTGSIDLWDRKTHSTIDWKIVG NTTVTKVKAHGPSQQYRVQASLYGMGLQNEGELVERNCIYFLPRNKTSLGDALPWETRFGPEPGKWALARAQLLVNLMDI IEQADGVGVRDSWIKQLPAAGPDKCFSCKGRVWPDMSALPEFDEKPWPDVPDKWLQLIPLIESEYQFTE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35182; Mature: 35051
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQSAPDMGKPPATPKTKTDTMEEPRLWPEIRQLIEADIQNAPRELQREIGPSELGTDCV CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHCCHHHCCHHHH HCLAAKLAGWPERRSPGWLPFIGTCVHAHFEQMFRELNREPAHQFLYTSEDSVTGLGERW HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHEECCCCCHHHHHHHH RSEYRVTVGRLQGLHGGYDVTGSIDLWDRKTHSTIDWKIVGNTTVTKVKAHGPSQQYRVQ HHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCEEEEEEECCCEEEEEECCCCCHHEEEE ASLYGMGLQNEGELVERNCIYFLPRNKTSLGDALPWETRFGPEPGKWALARAQLLVNLMD EHHEECCCCCCCCEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH IIEQADGVGVRDSWIKQLPAAGPDKCFSCKGRVWPDMSALPEFDEKPWPDVPDKWLQLIP HHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHHHHHH LIESEYQFTE HHHCCCCCCC >Mature Secondary Structure TQSAPDMGKPPATPKTKTDTMEEPRLWPEIRQLIEADIQNAPRELQREIGPSELGTDCV CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHCCHHHCCHHHH HCLAAKLAGWPERRSPGWLPFIGTCVHAHFEQMFRELNREPAHQFLYTSEDSVTGLGERW HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHEECCCCCHHHHHHHH RSEYRVTVGRLQGLHGGYDVTGSIDLWDRKTHSTIDWKIVGNTTVTKVKAHGPSQQYRVQ HHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCEEEEEEECCCEEEEEECCCCCHHEEEE ASLYGMGLQNEGELVERNCIYFLPRNKTSLGDALPWETRFGPEPGKWALARAQLLVNLMD EHHEECCCCCCCCEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH IIEQADGVGVRDSWIKQLPAAGPDKCFSCKGRVWPDMSALPEFDEKPWPDVPDKWLQLIP HHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHHHHHH LIESEYQFTE HHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA