| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
Click here to switch to the map view.
The map label for this gene is 213692012
Identifier: 213692012
GI number: 213692012
Start: 1317829
End: 1318653
Strand: Reverse
Name: 213692012
Synonym: Blon_1130
Alternate gene names: NA
Gene position: 1318653-1317829 (Counterclockwise)
Preceding gene: 213692013
Following gene: 213692011
Centisome position: 46.55
GC content: 64.48
Gene sequence:
>825_bases ATGGCTCCGAAGATGAGCGCGGAGCAGATGCTCAACCAGATCGACTCGCAGTCCGGCAAGTCCGCGTTCACGAAGGACAG CATGCCGGGCACGAGGGTGACCGGCATCATCGAGAACGTGACCGCGAACCAGGTGCGTGACTTCCAGACCAAGCAGCCGG CGTTCTGGAACGACGGCTCGCCTCGCCTGCAGGTATTGGTCACCATCGACACCGGCATCATCGACCCGAACGTGGAGGAT GATGACGGACGCCGCACCGTCTATATCAAGGGGTGGGGCGTGCAGCGCCGCGCATGGCTGCAGGCATTGCACAACGCCGG TTTGAAGAAGGCCGGTGAGGTCAAACCGGGCGACCGGTTCACGGCCACGTTCACCGGCTACGGGCCGAAGGGCAATCTGC CACAGCCGCCGAAACTGTTCGAATACGTGATCGAACACCAGTCGCCGGCCGATCTCGCCATGGGCCAGCCCCAGCAGCCC GCACAGCAGCCCTTCCAGCAGCAGCCCCAGCAAAGTTACCCGCAGCAGCAGTACGCCGCACAGCAGGCGGCACAGGCCCC GAATCAGGGGTATCAGCCGGCCCCAACCGACCCGTGGAACCCGCCCGCACAGCAGGGCCAGCAGCAATCTGTTCAGCCTG TGCAGCTCGGCCAGCAGCAGGTGGATCCGATGAAGGTCAACCAGTTGAAGGCGTTGGGCAAGCCGCCGCAGGAGATCGCC GCCTTGTTGGGCGTGCCGGTCGAAGCGGTGACGGCCGTCACCGACCAGGCGCAACCCCAATACCACGGGGGTTCCGAACA GATGCCGGAAACAGGTGAGTTCTAG
Upstream 100 bases:
>100_bases CGGTCAACAACCACAGCAACAGTACGGCTATCCCCAGCAGGGATATCCGCAACAGCAGGCTTACAGCCAGCAGCAGTATG GCGGCTATCAGCCGGCTCCG
Downstream 100 bases:
>100_bases TGGACGAGCTGCTGAAACACCTGCAGAACCAGTGGATCGAACTGGTGAAGGACATGGATTCCCTTGCCTCCGATCAGGTC GGTTTCCGTGACGTCGACTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MAPKMSAEQMLNQIDSQSGKSAFTKDSMPGTRVTGIIENVTANQVRDFQTKQPAFWNDGSPRLQVLVTIDTGIIDPNVED DDGRRTVYIKGWGVQRRAWLQALHNAGLKKAGEVKPGDRFTATFTGYGPKGNLPQPPKLFEYVIEHQSPADLAMGQPQQP AQQPFQQQPQQSYPQQQYAAQQAAQAPNQGYQPAPTDPWNPPAQQGQQQSVQPVQLGQQQVDPMKVNQLKALGKPPQEIA ALLGVPVEAVTAVTDQAQPQYHGGSEQMPETGEF
Sequences:
>Translated_274_residues MAPKMSAEQMLNQIDSQSGKSAFTKDSMPGTRVTGIIENVTANQVRDFQTKQPAFWNDGSPRLQVLVTIDTGIIDPNVED DDGRRTVYIKGWGVQRRAWLQALHNAGLKKAGEVKPGDRFTATFTGYGPKGNLPQPPKLFEYVIEHQSPADLAMGQPQQP AQQPFQQQPQQSYPQQQYAAQQAAQAPNQGYQPAPTDPWNPPAQQGQQQSVQPVQLGQQQVDPMKVNQLKALGKPPQEIA ALLGVPVEAVTAVTDQAQPQYHGGSEQMPETGEF >Mature_273_residues APKMSAEQMLNQIDSQSGKSAFTKDSMPGTRVTGIIENVTANQVRDFQTKQPAFWNDGSPRLQVLVTIDTGIIDPNVEDD DGRRTVYIKGWGVQRRAWLQALHNAGLKKAGEVKPGDRFTATFTGYGPKGNLPQPPKLFEYVIEHQSPADLAMGQPQQPA QQPFQQQPQQSYPQQQYAAQQAAQAPNQGYQPAPTDPWNPPAQQGQQQSVQPVQLGQQQVDPMKVNQLKALGKPPQEIAA LLGVPVEAVTAVTDQAQPQYHGGSEQMPETGEF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30018; Mature: 29887
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPKMSAEQMLNQIDSQSGKSAFTKDSMPGTRVTGIIENVTANQVRDFQTKQPAFWNDGS CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC PRLQVLVTIDTGIIDPNVEDDDGRRTVYIKGWGVQRRAWLQALHNAGLKKAGEVKPGDRF CEEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCE TATFTGYGPKGNLPQPPKLFEYVIEHQSPADLAMGQPQQPAQQPFQQQPQQSYPQQQYAA EEEEECCCCCCCCCCCHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHCHHHCCCHHHHHH QQAAQAPNQGYQPAPTDPWNPPAQQGQQQSVQPVQLGQQQVDPMKVNQLKALGKPPQEIA HHHHHCCCCCCCCCCCCCCCCCHHCCHHHCCCHHHHHHHHCCCHHHHHHHHCCCCHHHHH ALLGVPVEAVTAVTDQAQPQYHGGSEQMPETGEF HHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure APKMSAEQMLNQIDSQSGKSAFTKDSMPGTRVTGIIENVTANQVRDFQTKQPAFWNDGS CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC PRLQVLVTIDTGIIDPNVEDDDGRRTVYIKGWGVQRRAWLQALHNAGLKKAGEVKPGDRF CEEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCE TATFTGYGPKGNLPQPPKLFEYVIEHQSPADLAMGQPQQPAQQPFQQQPQQSYPQQQYAA EEEEECCCCCCCCCCCHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHCHHHCCCHHHHHH QQAAQAPNQGYQPAPTDPWNPPAQQGQQQSVQPVQLGQQQVDPMKVNQLKALGKPPQEIA HHHHHCCCCCCCCCCCCCCCCCHHCCHHHCCCHHHHHHHHCCCHHHHHHHHCCCCHHHHH ALLGVPVEAVTAVTDQAQPQYHGGSEQMPETGEF HHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA