| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692003
Identifier: 213692003
GI number: 213692003
Start: 1311082
End: 1311618
Strand: Reverse
Name: 213692003
Synonym: Blon_1121
Alternate gene names: NA
Gene position: 1311618-1311082 (Counterclockwise)
Preceding gene: 213692004
Following gene: 213692002
Centisome position: 46.3
GC content: 66.67
Gene sequence:
>537_bases ATGCCCAGCGGTGGTGCCCGCGCGAAGGCGGGCAGGATGCCCGACCCCTCGTCAGAGGCGTTCCAGCAGCGCGCCGCCGG CCTGTTCGCTCTGCCCGCGAACGGCTACAGGCGACCTCACCCGAAGTTCCCGCTGCCGCGGTACGTCGTCTGGTTCACGT TCAAGGACGATGACGGCTTCCATCGCGAGCCCGACGACGCGGCCTCGGCGCAGTGGAACGAGCGCGAGCGTGACGTGTGG AACGAATTGTGGCGCTACCCGCAGGGGTATGCGTGGAGCCGCCCGCAGTACAAGTACCTGCAGCACATGGTGGCCCTGTA CGTGCGTCAGTACGTGCTGTGCGAGTCGTCGGACGCGAAGGCCGCCGACCGTACGACCCTGTGCCGCTACGCGGATTCCA TCGGGCTCACCCCTCAGGGGCTGCGGCTGAACGGTTGGCACATCGTGGCCGACGAGAAGCCGCAGGCGCGCAGGAGAAGC GCGAAGATAGTCGATTTCCCTGATCCGCGCGACGAATGGCAGTCGATGCAGGAATAA
Upstream 100 bases:
>100_bases CCGTCTGTTTACGCTCCAACAGGAGCCGAACGAGCGGGACGTAGTGAGAAATATGGGCGTGACGCCGCTGCCTACACGTC GAAGGAAGAGGTGATTGGCC
Downstream 100 bases:
>100_bases GCGAGGTGTCGTATGGCGGAACATAGGCAGCCTCCAGCCTCGCTGGGCTTCCTGATGGCCGCATGGACTCGCGCCCACTG CGTGGTGCCCTCCGGCTATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MPSGGARAKAGRMPDPSSEAFQQRAAGLFALPANGYRRPHPKFPLPRYVVWFTFKDDDGFHREPDDAASAQWNERERDVW NELWRYPQGYAWSRPQYKYLQHMVALYVRQYVLCESSDAKAADRTTLCRYADSIGLTPQGLRLNGWHIVADEKPQARRRS AKIVDFPDPRDEWQSMQE
Sequences:
>Translated_178_residues MPSGGARAKAGRMPDPSSEAFQQRAAGLFALPANGYRRPHPKFPLPRYVVWFTFKDDDGFHREPDDAASAQWNERERDVW NELWRYPQGYAWSRPQYKYLQHMVALYVRQYVLCESSDAKAADRTTLCRYADSIGLTPQGLRLNGWHIVADEKPQARRRS AKIVDFPDPRDEWQSMQE >Mature_177_residues PSGGARAKAGRMPDPSSEAFQQRAAGLFALPANGYRRPHPKFPLPRYVVWFTFKDDDGFHREPDDAASAQWNERERDVWN ELWRYPQGYAWSRPQYKYLQHMVALYVRQYVLCESSDAKAADRTTLCRYADSIGLTPQGLRLNGWHIVADEKPQARRRSA KIVDFPDPRDEWQSMQE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20705; Mature: 20574
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSGGARAKAGRMPDPSSEAFQQRAAGLFALPANGYRRPHPKFPLPRYVVWFTFKDDDGF CCCCCCCCCCCCCCCCCHHHHHHHHCCEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCC HREPDDAASAQWNERERDVWNELWRYPQGYAWSRPQYKYLQHMVALYVRQYVLCESSDAK CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC AADRTTLCRYADSIGLTPQGLRLNGWHIVADEKPQARRRSAKIVDFPDPRDEWQSMQE HHHHHHHHHHHHHCCCCCCCCEECCEEEEECCCCHHHHHCCCCCCCCCCHHHHHHHCC >Mature Secondary Structure PSGGARAKAGRMPDPSSEAFQQRAAGLFALPANGYRRPHPKFPLPRYVVWFTFKDDDGF CCCCCCCCCCCCCCCCHHHHHHHHCCEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCC HREPDDAASAQWNERERDVWNELWRYPQGYAWSRPQYKYLQHMVALYVRQYVLCESSDAK CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC AADRTTLCRYADSIGLTPQGLRLNGWHIVADEKPQARRRSAKIVDFPDPRDEWQSMQE HHHHHHHHHHHHHCCCCCCCCEECCEEEEECCCCHHHHHCCCCCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA