Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is 213692002

Identifier: 213692002

GI number: 213692002

Start: 1309450

End: 1311069

Strand: Reverse

Name: 213692002

Synonym: Blon_1120

Alternate gene names: NA

Gene position: 1311069-1309450 (Counterclockwise)

Preceding gene: 213692003

Following gene: 213692001

Centisome position: 46.28

GC content: 65.0

Gene sequence:

>1620_bases
ATGGCGGAACATAGGCAGCCTCCAGCCTCGCTGGGCTTCCTGATGGCCGCATGGACTCGCGCCCACTGCGTGGTGCCCTC
CGGCTATGACCTCAACAAGCCGTTCAGCCTCGTGGGCTGGCAGTTGGCGAACGCGGTGGACTTCTACACCGTCAAGGCCG
GTACGCGGTTCAATGCGTCGCGCCCGTTGCAGGGCGGCGCGTTCCAATGGCGTCGCGGCCAGATTGTCGGCGGCCAGAAG
CTTGGTAAGTCGCCGTTCGGCGCTGCCGTGGCCTGCTTCGAGGCCGTGGGCCCCTGCGTGTTCTGCGGCTGGGCCGAAGG
CGGCGAGGAGTTCCGCTGCGAGGACTGGGGGTGTGGGTGCGGCTTCTCCTACGAGTACCGGCCGGGAGAGCCGATGGGCA
TGCCCCGGCGCACCGCGTTGGTGCAGCTGCTCGCCAACAGTGAGGAGCAGACCGCGAACGTGTACCGGCCTTTGCAGACC
ATGGTGCGCAACGGCCATCTGGACGACCTGATGAAGGTGCGCGAGGGCTTCATCCGCCTGCCCAACGGCGGGCGCATCGA
CCCAGTGACCGCCTCCGCCCGCTCGAAGCTGGGCAATCCCGTGAACTTTGCTCTGTGCGACGAGTCGGGCGTGTACACGA
AGCGCTCCGGCATGTTCGAGGTTGCGGACACGGTGCTGCGTGGCGTCACCGGCATGGACGGGCGCATGCTGGAGCTCACG
AACCCGTGGGACCCGATGGACGCGAGCTTCGGCCAGTCTACCTACGAGTCGACGGCGAAGGACATCATGAGGTTCTTCCC
CCGGCACGACCCCAACCTGGACTTCACCGACAGGGCCGACCGGCGCAGGATCCTCGAGTTCGTGTACAAGGGCTCGCCGT
GGGTGAACCTGGACGCGATCGAGGCGACATGCGAGGAACTGCTGCCACGCGACCCCGCGCAGGCCCGTCGCTTCTTCGGC
TGCGAACTCGTGCAGGGCCTCGGCTCCTACATGCCCGAAGCCCTCTACGATGACGGCATCGACGAACGCCCGTACCCGGC
CGACGATACCGAGATATGCCTCGGCTTCGACGGTTCCCAGTCCGGCGACTGGTCGGCGATTCGCGCCGAGACCGTGGATG
GATACCGGTTCACGCCGACCTATGGCGTGGACAGGCGCCCGACCTACTGGAACCCGGTCGAATGGGAGGGACGGATCCCA
CGCAGCGAGGTCGACGCCGCCGTTTCCGACCTGTTCAATCATTTCAAGGTCAGGCGATTCTACTGCGACCCTCATTTGTG
GGAGTCGCTTATCGATGATTGGAGTGTTCGTTTCGGCGAGGATGTGGTGGTGCAGTGGCCAACGAACCGTACCGGCCGCA
TGTATGATGCGCTCACCCGTTTCATGACCGACACCACCGACGGCACCACCACCCACAGCGGCGACCCGGTGGCGAAACTG
CACATGATGGCGGCGCGCAAGATCGCCAAGCCCGGCGACAAGTACGTGCTCGGCAAGCCGAGCGAGAATCAGAAAATCGA
TATAGCGATGGCCGACATCCTCGCGCACGAGGCGGCGTCCGACATGAGGGCGCTCAACTGGGGTAACGATTCGAACAGGA
TCGTCGTGTTCCGATGGTGA

Upstream 100 bases:

>100_bases
CGACGAGAAGCCGCAGGCGCGCAGGAGAAGCGCGAAGATAGTCGATTTCCCTGATCCGCGCGACGAATGGCAGTCGATGC
AGGAATAAGCGAGGTGTCGT

Downstream 100 bases:

>100_bases
AAAAGGAGGGATGACTGATGGCTTTTCTTTCCGGCCGGCTTTACGGGACCGCCCAGAGCATGGACTTGATCCTTGAGACC
AGCCAATCCCGTTACGATAC

Product: hypothetical protein

Products: NA

Alternate protein names: Terminase; Phage Terminase Protein Large Subunit-Like Protein; LOW QUALITY PROTEIN Protein

Number of amino acids: Translated: 539; Mature: 538

Protein sequence:

>539_residues
MAEHRQPPASLGFLMAAWTRAHCVVPSGYDLNKPFSLVGWQLANAVDFYTVKAGTRFNASRPLQGGAFQWRRGQIVGGQK
LGKSPFGAAVACFEAVGPCVFCGWAEGGEEFRCEDWGCGCGFSYEYRPGEPMGMPRRTALVQLLANSEEQTANVYRPLQT
MVRNGHLDDLMKVREGFIRLPNGGRIDPVTASARSKLGNPVNFALCDESGVYTKRSGMFEVADTVLRGVTGMDGRMLELT
NPWDPMDASFGQSTYESTAKDIMRFFPRHDPNLDFTDRADRRRILEFVYKGSPWVNLDAIEATCEELLPRDPAQARRFFG
CELVQGLGSYMPEALYDDGIDERPYPADDTEICLGFDGSQSGDWSAIRAETVDGYRFTPTYGVDRRPTYWNPVEWEGRIP
RSEVDAAVSDLFNHFKVRRFYCDPHLWESLIDDWSVRFGEDVVVQWPTNRTGRMYDALTRFMTDTTDGTTTHSGDPVAKL
HMMAARKIAKPGDKYVLGKPSENQKIDIAMADILAHEAASDMRALNWGNDSNRIVVFRW

Sequences:

>Translated_539_residues
MAEHRQPPASLGFLMAAWTRAHCVVPSGYDLNKPFSLVGWQLANAVDFYTVKAGTRFNASRPLQGGAFQWRRGQIVGGQK
LGKSPFGAAVACFEAVGPCVFCGWAEGGEEFRCEDWGCGCGFSYEYRPGEPMGMPRRTALVQLLANSEEQTANVYRPLQT
MVRNGHLDDLMKVREGFIRLPNGGRIDPVTASARSKLGNPVNFALCDESGVYTKRSGMFEVADTVLRGVTGMDGRMLELT
NPWDPMDASFGQSTYESTAKDIMRFFPRHDPNLDFTDRADRRRILEFVYKGSPWVNLDAIEATCEELLPRDPAQARRFFG
CELVQGLGSYMPEALYDDGIDERPYPADDTEICLGFDGSQSGDWSAIRAETVDGYRFTPTYGVDRRPTYWNPVEWEGRIP
RSEVDAAVSDLFNHFKVRRFYCDPHLWESLIDDWSVRFGEDVVVQWPTNRTGRMYDALTRFMTDTTDGTTTHSGDPVAKL
HMMAARKIAKPGDKYVLGKPSENQKIDIAMADILAHEAASDMRALNWGNDSNRIVVFRW
>Mature_538_residues
AEHRQPPASLGFLMAAWTRAHCVVPSGYDLNKPFSLVGWQLANAVDFYTVKAGTRFNASRPLQGGAFQWRRGQIVGGQKL
GKSPFGAAVACFEAVGPCVFCGWAEGGEEFRCEDWGCGCGFSYEYRPGEPMGMPRRTALVQLLANSEEQTANVYRPLQTM
VRNGHLDDLMKVREGFIRLPNGGRIDPVTASARSKLGNPVNFALCDESGVYTKRSGMFEVADTVLRGVTGMDGRMLELTN
PWDPMDASFGQSTYESTAKDIMRFFPRHDPNLDFTDRADRRRILEFVYKGSPWVNLDAIEATCEELLPRDPAQARRFFGC
ELVQGLGSYMPEALYDDGIDERPYPADDTEICLGFDGSQSGDWSAIRAETVDGYRFTPTYGVDRRPTYWNPVEWEGRIPR
SEVDAAVSDLFNHFKVRRFYCDPHLWESLIDDWSVRFGEDVVVQWPTNRTGRMYDALTRFMTDTTDGTTTHSGDPVAKLH
MMAARKIAKPGDKYVLGKPSENQKIDIAMADILAHEAASDMRALNWGNDSNRIVVFRW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60552; Mature: 60421

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEHRQPPASLGFLMAAWTRAHCVVPSGYDLNKPFSLVGWQLANAVDFYTVKAGTRFNAS
CCCCCCCCHHHHHHHHHHHHCEEECCCCCCCCCCHHHHHHHHHCCEEEEEEECCCCCCCC
RPLQGGAFQWRRGQIVGGQKLGKSPFGAAVACFEAVGPCVFCGWAEGGEEFRCEDWGCGC
CCCCCCCCEEECCEEECCHHCCCCCHHHHHHHHHHHCCEEEEECCCCCCCEEECCCCCCC
GFSYEYRPGEPMGMPRRTALVQLLANSEEQTANVYRPLQTMVRNGHLDDLMKVREGFIRL
CCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCEEEC
PNGGRIDPVTASARSKLGNPVNFALCDESGVYTKRSGMFEVADTVLRGVTGMDGRMLELT
CCCCCCCCCCHHHHHHCCCCEEEEEECCCCCEECCCCHHHHHHHHHHCCCCCCCEEEEEC
NPWDPMDASFGQSTYESTAKDIMRFFPRHDPNLDFTDRADRRRILEFVYKGSPWVNLDAI
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEHHHH
EATCEELLPRDPAQARRFFGCELVQGLGSYMPEALYDDGIDERPYPADDTEICLGFDGSQ
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCEEEEECCCCC
SGDWSAIRAETVDGYRFTPTYGVDRRPTYWNPVEWEGRIPRSEVDAAVSDLFNHFKVRRF
CCCCCEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEE
YCDPHLWESLIDDWSVRFGEDVVVQWPTNRTGRMYDALTRFMTDTTDGTTTHSGDPVAKL
ECCHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHH
HMMAARKIAKPGDKYVLGKPSENQKIDIAMADILAHEAASDMRALNWGNDSNRIVVFRW
HHHHHHHHCCCCCCEEECCCCCCCEEEHHHHHHHHHHHHHHHHEECCCCCCCEEEEEEC
>Mature Secondary Structure 
AEHRQPPASLGFLMAAWTRAHCVVPSGYDLNKPFSLVGWQLANAVDFYTVKAGTRFNAS
CCCCCCCHHHHHHHHHHHHCEEECCCCCCCCCCHHHHHHHHHCCEEEEEEECCCCCCCC
RPLQGGAFQWRRGQIVGGQKLGKSPFGAAVACFEAVGPCVFCGWAEGGEEFRCEDWGCGC
CCCCCCCCEEECCEEECCHHCCCCCHHHHHHHHHHHCCEEEEECCCCCCCEEECCCCCCC
GFSYEYRPGEPMGMPRRTALVQLLANSEEQTANVYRPLQTMVRNGHLDDLMKVREGFIRL
CCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCEEEC
PNGGRIDPVTASARSKLGNPVNFALCDESGVYTKRSGMFEVADTVLRGVTGMDGRMLELT
CCCCCCCCCCHHHHHHCCCCEEEEEECCCCCEECCCCHHHHHHHHHHCCCCCCCEEEEEC
NPWDPMDASFGQSTYESTAKDIMRFFPRHDPNLDFTDRADRRRILEFVYKGSPWVNLDAI
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEHHHH
EATCEELLPRDPAQARRFFGCELVQGLGSYMPEALYDDGIDERPYPADDTEICLGFDGSQ
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCEEEEECCCCC
SGDWSAIRAETVDGYRFTPTYGVDRRPTYWNPVEWEGRIPRSEVDAAVSDLFNHFKVRRF
CCCCCEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEE
YCDPHLWESLIDDWSVRFGEDVVVQWPTNRTGRMYDALTRFMTDTTDGTTTHSGDPVAKL
ECCHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHH
HMMAARKIAKPGDKYVLGKPSENQKIDIAMADILAHEAASDMRALNWGNDSNRIVVFRW
HHHHHHHHCCCCCCEEECCCCCCCEEEHHHHHHHHHHHHHHHHEECCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA