| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
Click here to switch to the map view.
The map label for this gene is 213691999
Identifier: 213691999
GI number: 213691999
Start: 1306318
End: 1306986
Strand: Reverse
Name: 213691999
Synonym: Blon_1117
Alternate gene names: NA
Gene position: 1306986-1306318 (Counterclockwise)
Preceding gene: 213692000
Following gene: 213691998
Centisome position: 46.14
GC content: 62.78
Gene sequence:
>669_bases ATGGCAGAAGCAGCAACAACCGGCACCGCCCCCGCAGGGGATGCTAACGGCGAAAGCCAGTCCGCATCACAGCAGGCGTT GGACATGCTGTCCGGCGACACCTCAACGGGCACCGGTGAAAACACCGACAACGCACCCAAGGCCGACCCTACCGACACGG ACCCGGAAGCAAGGCCAGACAGTGAAGCGGTACAATCCCCCGAAACCGACGATTCCGGCACCGAGCCGGAACCTGAAGAC CTGGGGGACGCCGGCAAGCGAGCCATCGACCGCATGAAAACGGAACGCAATACCGCGATCCGCGCACAGAAAAAGGCCGA GGCCGCGTTGGCCGAACGCGACAAGACCATCGCCGAACAGGCGCAGACCATCAAACAGCTGAAGGTCGAGAAACTCGCGT CCGGCAAACTACGGGAACCCGCCCTGGCACTCAAGCTCCTCGCCGACCTCAACGGCAGCGAGGACGACAAGACCATCACC AAGGCGATTGACAAGCTCATCTCCGAGCACCCGTATCTCGCTCCCGACCATGAGACGGACAGCCAGCAGACCGACCCGGA CGGGTTGGCGGAGCTGCTGCCCGGCGAAGCACTCAAACCAGCCGACCGCAATCAGGTGAACGCCGCCCAGTTCGGCGGAA TCCTCAGCAAGCTGGGAATCAGCATCTAA
Upstream 100 bases:
>100_bases CAAAAACTACGGCTGGATACTCCGATAACCAAGATTTCGCCCGCACGCCCATGGCTGCGGTCTTTTTTATAACCACCTAC CAGCAACTGGAGGAACCATC
Downstream 100 bases:
>100_bases CCAATATCGAACCAAGGAGGTTCCCAAAATGGCAGGCATCGACCTGAATCGCACCAGCACGGGCGTCAAACTGACCCCGG AGCAGTCCGATGAAATCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 222; Mature: 221
Protein sequence:
>222_residues MAEAATTGTAPAGDANGESQSASQQALDMLSGDTSTGTGENTDNAPKADPTDTDPEARPDSEAVQSPETDDSGTEPEPED LGDAGKRAIDRMKTERNTAIRAQKKAEAALAERDKTIAEQAQTIKQLKVEKLASGKLREPALALKLLADLNGSEDDKTIT KAIDKLISEHPYLAPDHETDSQQTDPDGLAELLPGEALKPADRNQVNAAQFGGILSKLGISI
Sequences:
>Translated_222_residues MAEAATTGTAPAGDANGESQSASQQALDMLSGDTSTGTGENTDNAPKADPTDTDPEARPDSEAVQSPETDDSGTEPEPED LGDAGKRAIDRMKTERNTAIRAQKKAEAALAERDKTIAEQAQTIKQLKVEKLASGKLREPALALKLLADLNGSEDDKTIT KAIDKLISEHPYLAPDHETDSQQTDPDGLAELLPGEALKPADRNQVNAAQFGGILSKLGISI >Mature_221_residues AEAATTGTAPAGDANGESQSASQQALDMLSGDTSTGTGENTDNAPKADPTDTDPEARPDSEAVQSPETDDSGTEPEPEDL GDAGKRAIDRMKTERNTAIRAQKKAEAALAERDKTIAEQAQTIKQLKVEKLASGKLREPALALKLLADLNGSEDDKTITK AIDKLISEHPYLAPDHETDSQQTDPDGLAELLPGEALKPADRNQVNAAQFGGILSKLGISI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23313; Mature: 23181
Theoretical pI: Translated: 4.19; Mature: 4.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEAATTGTAPAGDANGESQSASQQALDMLSGDTSTGTGENTDNAPKADPTDTDPEARPD CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SEAVQSPETDDSGTEPEPEDLGDAGKRAIDRMKTERNTAIRAQKKAEAALAERDKTIAEQ HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQTIKQLKVEKLASGKLREPALALKLLADLNGSEDDKTITKAIDKLISEHPYLAPDHETD HHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC SQQTDPDGLAELLPGEALKPADRNQVNAAQFGGILSKLGISI CCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure AEAATTGTAPAGDANGESQSASQQALDMLSGDTSTGTGENTDNAPKADPTDTDPEARPD CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SEAVQSPETDDSGTEPEPEDLGDAGKRAIDRMKTERNTAIRAQKKAEAALAERDKTIAEQ HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQTIKQLKVEKLASGKLREPALALKLLADLNGSEDDKTITKAIDKLISEHPYLAPDHETD HHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC SQQTDPDGLAELLPGEALKPADRNQVNAAQFGGILSKLGISI CCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA