| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692000
Identifier: 213692000
GI number: 213692000
Start: 1307059
End: 1307928
Strand: Reverse
Name: 213692000
Synonym: Blon_1118
Alternate gene names: NA
Gene position: 1307928-1307059 (Counterclockwise)
Preceding gene: 213692001
Following gene: 213691999
Centisome position: 46.17
GC content: 65.4
Gene sequence:
>870_bases ATGGGGCCGGCCCTGTTCCGGCTGCTGGACAATGCGCAGCTGGAGACCGCTCGGGAAACCTTGGAGGCGACCCCGGCGAT CATGGAATCGTTCGACGGCTACCTGCAGCCGGCTGCCTACGTGGTCGAACCCGAACGATTCGTCGGAGTGAACGGCGACG GCATGGACACGAGGGACACCATGTGGGGTGCCGTCGTGCGCGGCAAGCAGCTCATCGAACGGGGGGCCTCGATTTCGGTC GCGTTGCATGGCATCGAATACATGCTCGTGATGCGTTCTCGCACCATGATCGCCGACACGCAGAGGGCCGTAGCCGCCGT GTCCGCGCGAAGCCGCAACCCCTATGCGGGCTACGTGCGCTGCCTAACCCCGCCGAGCTGCGGGAGATGCGTGGTGCTGG CGGGCAAACCGTCCGGCGGCGTCGCGTTCCAACGCCACCCGAACTGCGATTGCACCGCCTGCTATGCGGGCGACCTGCCG AAAGGCTGCTATGCGGACGCGAACAGCTACCTTGACTCGTTGTCCGACGAGGAGCTCGCCCACACGCTGGGCAGCAGGGC GAACGCGCGCGCATGGAAGGACGGCGCTGACGTGAGCCAGCTCGTCAACGCCTACCGGCACAAGGGCGACGTGCGAACCG CGCAGGTCTATGACCGCCGGATCAAATACACGATCGAGGGCACGACGAAGCGCGGCTGGGCGAACTGGGCGATGCGCAAC GCCGGCTACGCGAGGGAAGCAAAACGCGGAGGCCGCTACACGCGATTGGACCGCCCCCGTCTCATGCCCGAAACCATCTA CCAGATAGCCGGCGACGACCCCGACAAGGCGTATCGCATGCTCAAAAACTACGGCTGGATACTCCGATAA
Upstream 100 bases:
>100_bases GGCGCGGCATCTGCGAAGCCGCAGCAATAGGACCATTCGCGAGGTCGTCTCCCTGTGGCGACGCCATGCGAGACCCGATT TCGATGATGCGTTCTACCGC
Downstream 100 bases:
>100_bases CCAAGATTTCGCCCGCACGCCCATGGCTGCGGTCTTTTTTATAACCACCTACCAGCAACTGGAGGAACCATCATGGCAGA AGCAGCAACAACCGGCACCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 289; Mature: 288
Protein sequence:
>289_residues MGPALFRLLDNAQLETARETLEATPAIMESFDGYLQPAAYVVEPERFVGVNGDGMDTRDTMWGAVVRGKQLIERGASISV ALHGIEYMLVMRSRTMIADTQRAVAAVSARSRNPYAGYVRCLTPPSCGRCVVLAGKPSGGVAFQRHPNCDCTACYAGDLP KGCYADANSYLDSLSDEELAHTLGSRANARAWKDGADVSQLVNAYRHKGDVRTAQVYDRRIKYTIEGTTKRGWANWAMRN AGYAREAKRGGRYTRLDRPRLMPETIYQIAGDDPDKAYRMLKNYGWILR
Sequences:
>Translated_289_residues MGPALFRLLDNAQLETARETLEATPAIMESFDGYLQPAAYVVEPERFVGVNGDGMDTRDTMWGAVVRGKQLIERGASISV ALHGIEYMLVMRSRTMIADTQRAVAAVSARSRNPYAGYVRCLTPPSCGRCVVLAGKPSGGVAFQRHPNCDCTACYAGDLP KGCYADANSYLDSLSDEELAHTLGSRANARAWKDGADVSQLVNAYRHKGDVRTAQVYDRRIKYTIEGTTKRGWANWAMRN AGYAREAKRGGRYTRLDRPRLMPETIYQIAGDDPDKAYRMLKNYGWILR >Mature_288_residues GPALFRLLDNAQLETARETLEATPAIMESFDGYLQPAAYVVEPERFVGVNGDGMDTRDTMWGAVVRGKQLIERGASISVA LHGIEYMLVMRSRTMIADTQRAVAAVSARSRNPYAGYVRCLTPPSCGRCVVLAGKPSGGVAFQRHPNCDCTACYAGDLPK GCYADANSYLDSLSDEELAHTLGSRANARAWKDGADVSQLVNAYRHKGDVRTAQVYDRRIKYTIEGTTKRGWANWAMRNA GYAREAKRGGRYTRLDRPRLMPETIYQIAGDDPDKAYRMLKNYGWILR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32077; Mature: 31946
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGPALFRLLDNAQLETARETLEATPAIMESFDGYLQPAAYVVEPERFVGVNGDGMDTRDT CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHEECCCCCCCCCHHH MWGAVVRGKQLIERGASISVALHGIEYMLVMRSRTMIADTQRAVAAVSARSRNPYAGYVR HHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEE CLTPPSCGRCVVLAGKPSGGVAFQRHPNCDCTACYAGDLPKGCYADANSYLDSLSDEELA EECCCCCCCEEEEEECCCCCEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHCCCHHHHH HTLGSRANARAWKDGADVSQLVNAYRHKGDVRTAQVYDRRIKYTIEGTTKRGWANWAMRN HHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHCEEEEEEECCCCCCHHHHHHHC AGYAREAKRGGRYTRLDRPRLMPETIYQIAGDDPDKAYRMLKNYGWILR CCCHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCC >Mature Secondary Structure GPALFRLLDNAQLETARETLEATPAIMESFDGYLQPAAYVVEPERFVGVNGDGMDTRDT CHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHEECCCCCCCCCHHH MWGAVVRGKQLIERGASISVALHGIEYMLVMRSRTMIADTQRAVAAVSARSRNPYAGYVR HHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEE CLTPPSCGRCVVLAGKPSGGVAFQRHPNCDCTACYAGDLPKGCYADANSYLDSLSDEELA EECCCCCCCEEEEEECCCCCEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHCCCHHHHH HTLGSRANARAWKDGADVSQLVNAYRHKGDVRTAQVYDRRIKYTIEGTTKRGWANWAMRN HHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHCEEEEEEECCCCCCHHHHHHHC AGYAREAKRGGRYTRLDRPRLMPETIYQIAGDDPDKAYRMLKNYGWILR CCCHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA