| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691987
Identifier: 213691987
GI number: 213691987
Start: 1296636
End: 1297535
Strand: Reverse
Name: 213691987
Synonym: Blon_1105
Alternate gene names: NA
Gene position: 1297535-1296636 (Counterclockwise)
Preceding gene: 213691988
Following gene: 213691986
Centisome position: 45.8
GC content: 64.56
Gene sequence:
>900_bases ATGACTACAGCTTTGGGAGTGGCCCCCGATTCGACCGGCAGGGGAATGGACCCGCCGACCCACCGCCGGATCATCAAGGC GCACTGGGAGAACGTCGGCATCGTGTGCGGATTGGACGTGACGGGTCGCTCCGACCTGCGCTACAACGTGGCCGCGGGCG TGGCCGTCTGCTCACGCGGCAATGCGGACGGGTACACGGAAGCGTATTGGAACGGCGGGCAGACCGTCGCCGTCTCGGCC GGCGATCCGTCGAACCCTCGCATAGACACCATATGGCTCAAGGCGAACGACATCTCTCAGGGCGACGAGGACAACCAGGT GGCCGTGGGCGTCACACAGGGCACGCCAAGCGCGAATCCGGTAGCCCCGTCCGTCCCGTCCGGCTGCACGAGGCTGATGA GCATGCGCATGCCGGCAGCCGCCTCGTCCACCCAATCGGCAACGATGGTCGACACGCAGGACTACGCGATCCCCTACGGC GCGAACCTCGGCATCCTCGCCAGGATCGCGGAGAACAAGGATCTGCAGGCGTCATCCAATCCCGCGTACACGGCGCCGTT CCTGATCGACACGTTCAAGATGCCGACCGACCGCAATCTGCTCCTGACCATGTACGCGTGCGTCTCCGCGCCGAGCAAAA ACGGCGCGAAGGGCGTGGCCGCGGTGCGGTTCGTCGTCGACGGGAATCTGTACACCACGAGGAAAATCGAATACACGGAT TCGTGGGTGACGCATGAATGCACGTGCTCCCTCCAGCTTGCGAAGGGCCCGCACACCATCGGCGTCGCCATGTTCAACGA ACAGGGCCCGGGCTATGTGACGCATTACGGCGTGAAGGACAATGGCGACACGTATGTGGGCCGCGTGCTCGTCGTCAAGG ACGAGGGGGTGGCGAGATGA
Upstream 100 bases:
>100_bases GTGCCGCCGGGCGGCTCGGTGGCCGTGAACCTGCAATCCGTCGGCGACGGGTACGTGACCGTCGAATGCCGTGACACCTA CATGTGATCAAGGAGGGATT
Downstream 100 bases:
>100_bases GCTGGCGCGCCTGCCTGTGCGACACGATGACCGGGCTGCTCGGCCAGCAGATCGACATCCCCGGCTTCACATGGTCGATG ACCGTCAGCAACTCCAGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MTTALGVAPDSTGRGMDPPTHRRIIKAHWENVGIVCGLDVTGRSDLRYNVAAGVAVCSRGNADGYTEAYWNGGQTVAVSA GDPSNPRIDTIWLKANDISQGDEDNQVAVGVTQGTPSANPVAPSVPSGCTRLMSMRMPAAASSTQSATMVDTQDYAIPYG ANLGILARIAENKDLQASSNPAYTAPFLIDTFKMPTDRNLLLTMYACVSAPSKNGAKGVAAVRFVVDGNLYTTRKIEYTD SWVTHECTCSLQLAKGPHTIGVAMFNEQGPGYVTHYGVKDNGDTYVGRVLVVKDEGVAR
Sequences:
>Translated_299_residues MTTALGVAPDSTGRGMDPPTHRRIIKAHWENVGIVCGLDVTGRSDLRYNVAAGVAVCSRGNADGYTEAYWNGGQTVAVSA GDPSNPRIDTIWLKANDISQGDEDNQVAVGVTQGTPSANPVAPSVPSGCTRLMSMRMPAAASSTQSATMVDTQDYAIPYG ANLGILARIAENKDLQASSNPAYTAPFLIDTFKMPTDRNLLLTMYACVSAPSKNGAKGVAAVRFVVDGNLYTTRKIEYTD SWVTHECTCSLQLAKGPHTIGVAMFNEQGPGYVTHYGVKDNGDTYVGRVLVVKDEGVAR >Mature_298_residues TTALGVAPDSTGRGMDPPTHRRIIKAHWENVGIVCGLDVTGRSDLRYNVAAGVAVCSRGNADGYTEAYWNGGQTVAVSAG DPSNPRIDTIWLKANDISQGDEDNQVAVGVTQGTPSANPVAPSVPSGCTRLMSMRMPAAASSTQSATMVDTQDYAIPYGA NLGILARIAENKDLQASSNPAYTAPFLIDTFKMPTDRNLLLTMYACVSAPSKNGAKGVAAVRFVVDGNLYTTRKIEYTDS WVTHECTCSLQLAKGPHTIGVAMFNEQGPGYVTHYGVKDNGDTYVGRVLVVKDEGVAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31711; Mature: 31580
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTALGVAPDSTGRGMDPPTHRRIIKAHWENVGIVCGLDVTGRSDLRYNVAAGVAVCSRG CCCEEECCCCCCCCCCCCHHHHHHHEECCCCCCEEEECCCCCCCCEEEEEEEEEEEECCC NADGYTEAYWNGGQTVAVSAGDPSNPRIDTIWLKANDISQGDEDNQVAVGVTQGTPSANP CCCCCEEEEECCCCEEEEECCCCCCCCEEEEEEEECCCCCCCCCCEEEEEEECCCCCCCC VAPSVPSGCTRLMSMRMPAAASSTQSATMVDTQDYAIPYGANLGILARIAENKDLQASSN CCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCEEECCCCCCEEEEEECCCCCCCCCC PAYTAPFLIDTFKMPTDRNLLLTMYACVSAPSKNGAKGVAAVRFVVDGNLYTTRKIEYTD CCEECCEEEEEECCCCCCCCEEEEEEHHCCCCCCCCCCEEEEEEEECCCEEEEEEEEECC SWVTHECTCSLQLAKGPHTIGVAMFNEQGPGYVTHYGVKDNGDTYVGRVLVVKDEGVAR CEEEEEEEEEEEECCCCCEEEEEEECCCCCCEEEEECCCCCCCEEEEEEEEEECCCCCC >Mature Secondary Structure TTALGVAPDSTGRGMDPPTHRRIIKAHWENVGIVCGLDVTGRSDLRYNVAAGVAVCSRG CCEEECCCCCCCCCCCCHHHHHHHEECCCCCCEEEECCCCCCCCEEEEEEEEEEEECCC NADGYTEAYWNGGQTVAVSAGDPSNPRIDTIWLKANDISQGDEDNQVAVGVTQGTPSANP CCCCCEEEEECCCCEEEEECCCCCCCCEEEEEEEECCCCCCCCCCEEEEEEECCCCCCCC VAPSVPSGCTRLMSMRMPAAASSTQSATMVDTQDYAIPYGANLGILARIAENKDLQASSN CCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCEEECCCCCCEEEEEECCCCCCCCCC PAYTAPFLIDTFKMPTDRNLLLTMYACVSAPSKNGAKGVAAVRFVVDGNLYTTRKIEYTD CCEECCEEEEEECCCCCCCCEEEEEEHHCCCCCCCCCCEEEEEEEECCCEEEEEEEEECC SWVTHECTCSLQLAKGPHTIGVAMFNEQGPGYVTHYGVKDNGDTYVGRVLVVKDEGVAR CEEEEEEEEEEEECCCCCEEEEEEECCCCCCEEEEECCCCCCCEEEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA