| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691988
Identifier: 213691988
GI number: 213691988
Start: 1297549
End: 1298448
Strand: Reverse
Name: 213691988
Synonym: Blon_1106
Alternate gene names: NA
Gene position: 1298448-1297549 (Counterclockwise)
Preceding gene: 213691989
Following gene: 213691987
Centisome position: 45.84
GC content: 66.22
Gene sequence:
>900_bases ATGAACGACCTGTGGACTTTGAGCCCGCGTTACGGGGAGCTGTGGGCCGGCGACGAGCTCGTCTGCCGGTTCAATCCCGC GGATTCGTCCGACCGGGGCCTGTACATCACCGCCAACGGCGTGGAGGGCTGGGATACGCTGCCGGACGCGAAGGTGGAGT TGCACGAACGCGGCCAGGGCGACGGCGCGCATGACGTGCCCGAAACGGATATCCTGTATTCGGCCCGCACCGTGACCGTG CACTACGAGGCGGTCGGCTACAGCCGTGCGGACCTACTCTCCCTGATGCGCCGCATCAACACCGCGGCGCACCGCTCCTG CAGGCTGCGCATGGTCGACGGCGACGAGGACACATACTGTGAGGGCTACGTGGCGCAGATGGGCCGCAACTCGCGGTGGA ATCCCCTGTTGGAGAACGATCTGACATTGCATTTCGTGTGTCCTCGTCCTGAGCGTTTGTCGTGGGATGCGCGGCGTTTT CAGTTGGTTCCGGCGTGGGATGCGGGGTTGGGCCTGTCGTATGGGAGTGGGGACGCGGGGCTCGCGTATCCGCTGTCGTA TGGGCGTTCGGCCGTGGATGCGCGGAACGTGTGCACGCTCGTCAACAACGGTTCCAGCCGAGCCTACCCGGTGTTCACGG TACAAGGTCCGTGGCCGGACGGCGTGCAATTGACCTTCCCGGGCCGTGACATGAGCCTGGACTATTCGCAGGCGGTCGGC AGCGTGCCGCTCGTGCTGGACTCACGGAGTCGCGCGGCGAGCATAGGCGGCCTGGACGTGAGCCGCAACCTGCGCCAGCG CGGCTTCCCCACCGTGCCGCCGGGCGGCTCGGTGGCCGTGAACCTGCAATCCGTCGGCGACGGGTACGTGACCGTCGAAT GCCGTGACACCTACATGTGA
Upstream 100 bases:
>100_bases CCGTGTTCCAGCAGAAGATCGTGCGTCCGGCGGATGACATGTATACGGCGGCGTCGATCATGTACCGCAACGCCGCTCAT CTCGTGGGAAGGCTCTCAAG
Downstream 100 bases:
>100_bases TCAAGGAGGGATTATGACTACAGCTTTGGGAGTGGCCCCCGATTCGACCGGCAGGGGAATGGACCCGCCGACCCACCGCC GGATCATCAAGGCGCACTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 299; Mature: 299
Protein sequence:
>299_residues MNDLWTLSPRYGELWAGDELVCRFNPADSSDRGLYITANGVEGWDTLPDAKVELHERGQGDGAHDVPETDILYSARTVTV HYEAVGYSRADLLSLMRRINTAAHRSCRLRMVDGDEDTYCEGYVAQMGRNSRWNPLLENDLTLHFVCPRPERLSWDARRF QLVPAWDAGLGLSYGSGDAGLAYPLSYGRSAVDARNVCTLVNNGSSRAYPVFTVQGPWPDGVQLTFPGRDMSLDYSQAVG SVPLVLDSRSRAASIGGLDVSRNLRQRGFPTVPPGGSVAVNLQSVGDGYVTVECRDTYM
Sequences:
>Translated_299_residues MNDLWTLSPRYGELWAGDELVCRFNPADSSDRGLYITANGVEGWDTLPDAKVELHERGQGDGAHDVPETDILYSARTVTV HYEAVGYSRADLLSLMRRINTAAHRSCRLRMVDGDEDTYCEGYVAQMGRNSRWNPLLENDLTLHFVCPRPERLSWDARRF QLVPAWDAGLGLSYGSGDAGLAYPLSYGRSAVDARNVCTLVNNGSSRAYPVFTVQGPWPDGVQLTFPGRDMSLDYSQAVG SVPLVLDSRSRAASIGGLDVSRNLRQRGFPTVPPGGSVAVNLQSVGDGYVTVECRDTYM >Mature_299_residues MNDLWTLSPRYGELWAGDELVCRFNPADSSDRGLYITANGVEGWDTLPDAKVELHERGQGDGAHDVPETDILYSARTVTV HYEAVGYSRADLLSLMRRINTAAHRSCRLRMVDGDEDTYCEGYVAQMGRNSRWNPLLENDLTLHFVCPRPERLSWDARRF QLVPAWDAGLGLSYGSGDAGLAYPLSYGRSAVDARNVCTLVNNGSSRAYPVFTVQGPWPDGVQLTFPGRDMSLDYSQAVG SVPLVLDSRSRAASIGGLDVSRNLRQRGFPTVPPGGSVAVNLQSVGDGYVTVECRDTYM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32875; Mature: 32875
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDLWTLSPRYGELWAGDELVCRFNPADSSDRGLYITANGVEGWDTLPDAKVELHERGQG CCCCEECCCCCCCEECCCEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCEEEHHHCCCC DGAHDVPETDILYSARTVTVHYEAVGYSRADLLSLMRRINTAAHRSCRLRMVDGDEDTYC CCCCCCCCCCEEEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCHH EGYVAQMGRNSRWNPLLENDLTLHFVCPRPERLSWDARRFQLVPAWDAGLGLSYGSGDAG HHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCCEECCCCCC LAYPLSYGRSAVDARNVCTLVNNGSSRAYPVFTVQGPWPDGVQLTFPGRDMSLDYSQAVG EEEEHHCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCEEEECCCCCCCCHHHHCC SVPLVLDSRSRAASIGGLDVSRNLRQRGFPTVPPGGSVAVNLQSVGDGYVTVECRDTYM CCEEEEECCCCEEECCCCCHHHHHHHCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCC >Mature Secondary Structure MNDLWTLSPRYGELWAGDELVCRFNPADSSDRGLYITANGVEGWDTLPDAKVELHERGQG CCCCEECCCCCCCEECCCEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCEEEHHHCCCC DGAHDVPETDILYSARTVTVHYEAVGYSRADLLSLMRRINTAAHRSCRLRMVDGDEDTYC CCCCCCCCCCEEEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCHH EGYVAQMGRNSRWNPLLENDLTLHFVCPRPERLSWDARRFQLVPAWDAGLGLSYGSGDAG HHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCCEECCCCCC LAYPLSYGRSAVDARNVCTLVNNGSSRAYPVFTVQGPWPDGVQLTFPGRDMSLDYSQAVG EEEEHHCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCEEEECCCCCCCCHHHHCC SVPLVLDSRSRAASIGGLDVSRNLRQRGFPTVPPGGSVAVNLQSVGDGYVTVECRDTYM CCEEEEECCCCEEECCCCCHHHHHHHCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA