| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is pgk [H]
Identifier: 213691969
GI number: 213691969
Start: 1273517
End: 1274722
Strand: Direct
Name: pgk [H]
Synonym: Blon_1087
Alternate gene names: 213691969
Gene position: 1273517-1274722 (Clockwise)
Preceding gene: 213691968
Following gene: 213691970
Centisome position: 44.96
GC content: 64.84
Gene sequence:
>1206_bases ATGAAGACACTCAAGGACCTTGGAGATCTCAAGGGCAAGCGCGTTCTGGTTCGCGCTGATTTTAATGTTCCGCTGGACGG CACCACCATCACCGATGACGGTCGAATCAAGGCTGCTCTGCCGACCATCAAGACCCTGCGCGAAGAAGGCGCCAAGGTCA TCCTCATGGCCCACCTTGGCCGCCCGAAGGGCAAGGTCGTTCCTGAGCTGAGCCTGGCCCCGGTTGCCGCCCGCCTCGGC GAGCTGCTCGGCACCAACGTGCCGCTGGCCAAGGACACCTACGGCGAGGACGCTCAGGCCAAGGTCGCCGCCATGAACGA TGGCGACGTTGTGCTGCTTGAGAACGTTCGTTTCAACCCGGAGGAGACCTCCAAGGACGCCGACGAACGCGCCGCTTACG CCAAGAAGATCGCCGCCCTCGGCGAGGCCTTCGTTTCCGATGGCTTCGGCGTGGTCCACCGCGCCCAGGGCTCCAACTAC GACGTTGCCGCCGATCTGCCGGCCGCCGCAGGCCTGCTGGTCGAGAAGGAAGTCAAGGCCCTGTCCAAGGCCACCGAGAA CCCGGAGCGTCCGTTCACCGTGGTGCTCGGCGGTTCCAAGGTCTCCGACAAGCTCGGCGTCATCGAGAACCTGCTCGACA AGGCCAACCGTCTGGTCATCGGCGGCGGCATGGTGTTCACCTTCCTCAAGGCCAAGGGCTACGAGGTCGGCACCTCCCTG CTTGAAGAGGACCAGCTTGAGAAGGTCAAGGGCTACATCGAGACCGCCGAGAAGAACGGCGTTGAGCTCGTGCTGCCGAC CGACGTCGTCGTGAACGCCGGCTTCCCGGCCGGTGACACCCCGGTTGCTCCTGAAGTCGTTGCCGCCGACGCCATCCCGG CCGACAAGATGGGTCTGGACATCGGCCCGGAGTCCCAGAAGCTCTTCCACGACAAGATCGTCGACTCCAAGACCGTCGTG TGGAACGGCCCGATGGGCGTGTTCGAGGTTCCTGAGTTCGCCGCCGGCACCAAGGCCGTGGCCCAGGGTCTGGTCGACGC CACCGCAGCCGGTGCGTTCACCATCGTCGGTGGCGGCGACTCCGCCTCCGCCGTGCGCAACCTCGGCTTCCCGGAGGACG GCTTCTCCCACATCTCCACCGGTGGTGGCGCTTCCCTCGAGTTCCTCGAAGGCAAGGAGCTCCCTGGCCTGAAGGTGCTT GAGTAA
Upstream 100 bases:
>100_bases GTCAGTAGACGAATGCGGTGTTTTGTTCCGGAATGCCTGTAATATGCAAAGTGGCAAAATTGGCCACTTTGACGTGCGAT TCGTCAAGGAAAGGATATTC
Downstream 100 bases:
>100_bases TCCATTTTCTAGCTCCCCTCCTTGAGGGGAGCTACGTATTTTCTAGAAGGGAAACATATGGCGTCCAAACGCATTCCGTT GGTGGCCGGCAACTGGAAGA
Product: phosphoglycerate kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 401; Mature: 401
Protein sequence:
>401_residues MKTLKDLGDLKGKRVLVRADFNVPLDGTTITDDGRIKAALPTIKTLREEGAKVILMAHLGRPKGKVVPELSLAPVAARLG ELLGTNVPLAKDTYGEDAQAKVAAMNDGDVVLLENVRFNPEETSKDADERAAYAKKIAALGEAFVSDGFGVVHRAQGSNY DVAADLPAAAGLLVEKEVKALSKATENPERPFTVVLGGSKVSDKLGVIENLLDKANRLVIGGGMVFTFLKAKGYEVGTSL LEEDQLEKVKGYIETAEKNGVELVLPTDVVVNAGFPAGDTPVAPEVVAADAIPADKMGLDIGPESQKLFHDKIVDSKTVV WNGPMGVFEVPEFAAGTKAVAQGLVDATAAGAFTIVGGGDSASAVRNLGFPEDGFSHISTGGGASLEFLEGKELPGLKVL E
Sequences:
>Translated_401_residues MKTLKDLGDLKGKRVLVRADFNVPLDGTTITDDGRIKAALPTIKTLREEGAKVILMAHLGRPKGKVVPELSLAPVAARLG ELLGTNVPLAKDTYGEDAQAKVAAMNDGDVVLLENVRFNPEETSKDADERAAYAKKIAALGEAFVSDGFGVVHRAQGSNY DVAADLPAAAGLLVEKEVKALSKATENPERPFTVVLGGSKVSDKLGVIENLLDKANRLVIGGGMVFTFLKAKGYEVGTSL LEEDQLEKVKGYIETAEKNGVELVLPTDVVVNAGFPAGDTPVAPEVVAADAIPADKMGLDIGPESQKLFHDKIVDSKTVV WNGPMGVFEVPEFAAGTKAVAQGLVDATAAGAFTIVGGGDSASAVRNLGFPEDGFSHISTGGGASLEFLEGKELPGLKVL E >Mature_401_residues MKTLKDLGDLKGKRVLVRADFNVPLDGTTITDDGRIKAALPTIKTLREEGAKVILMAHLGRPKGKVVPELSLAPVAARLG ELLGTNVPLAKDTYGEDAQAKVAAMNDGDVVLLENVRFNPEETSKDADERAAYAKKIAALGEAFVSDGFGVVHRAQGSNY DVAADLPAAAGLLVEKEVKALSKATENPERPFTVVLGGSKVSDKLGVIENLLDKANRLVIGGGMVFTFLKAKGYEVGTSL LEEDQLEKVKGYIETAEKNGVELVLPTDVVVNAGFPAGDTPVAPEVVAADAIPADKMGLDIGPESQKLFHDKIVDSKTVV WNGPMGVFEVPEFAAGTKAVAQGLVDATAAGAFTIVGGGDSASAVRNLGFPEDGFSHISTGGGASLEFLEGKELPGLKVL E
Specific function: Second phase of glycolysis; second step. [C]
COG id: COG0126
COG function: function code G; 3-phosphoglycerate kinase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate kinase family [H]
Homologues:
Organism=Homo sapiens, GI4505763, Length=407, Percent_Identity=46.9287469287469, Blast_Score=342, Evalue=4e-94, Organism=Homo sapiens, GI31543397, Length=407, Percent_Identity=45.2088452088452, Blast_Score=328, Evalue=5e-90, Organism=Escherichia coli, GI1789294, Length=398, Percent_Identity=42.713567839196, Blast_Score=273, Evalue=1e-74, Organism=Caenorhabditis elegans, GI17508823, Length=405, Percent_Identity=45.9259259259259, Blast_Score=333, Evalue=9e-92, Organism=Saccharomyces cerevisiae, GI6319857, Length=411, Percent_Identity=47.4452554744526, Blast_Score=334, Evalue=1e-92, Organism=Drosophila melanogaster, GI17136394, Length=405, Percent_Identity=45.679012345679, Blast_Score=317, Evalue=7e-87, Organism=Drosophila melanogaster, GI24581203, Length=415, Percent_Identity=42.1686746987952, Blast_Score=288, Evalue=3e-78,
Paralogues:
None
Copy number: 2990 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1460 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001576 - InterPro: IPR015901 - InterPro: IPR015911 - InterPro: IPR015824 [H]
Pfam domain/function: PF00162 PGK [H]
EC number: =2.7.2.3 [H]
Molecular weight: Translated: 41896; Mature: 41896
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: PS00111 PGLYCERATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLKDLGDLKGKRVLVRADFNVPLDGTTITDDGRIKAALPTIKTLREEGAKVILMAHLG CCCHHHHHCCCCCEEEEEECCCCCCCCCEECCCCEEEEHHHHHHHHHHCCCEEEEEEECC RPKGKVVPELSLAPVAARLGELLGTNVPLAKDTYGEDAQAKVAAMNDGDVVLLENVRFNP CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCC EETSKDADERAAYAKKIAALGEAFVSDGFGVVHRAQGSNYDVAADLPAAAGLLVEKEVKA CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEECCCHHHHHHHHHHHHH LSKATENPERPFTVVLGGSKVSDKLGVIENLLDKANRLVIGGGMVFTFLKAKGYEVGTSL HHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCEEEEECHHEEEHHHHCCCHHHHHH LEEDQLEKVKGYIETAEKNGVELVLPTDVVVNAGFPAGDTPVAPEVVAADAIPADKMGLD HHHHHHHHHHHHHHHHCCCCCEEEECCCEEEECCCCCCCCCCCCHHHHHCCCCCHHCCCC IGPESQKLFHDKIVDSKTVVWNGPMGVFEVPEFAAGTKAVAQGLVDATAAGAFTIVGGGD CCCCHHHHHHHHHCCCCEEEECCCCCCEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCC SASAVRNLGFPEDGFSHISTGGGASLEFLEGKELPGLKVLE CHHHHHHCCCCCCCHHHCCCCCCCEEEEECCCCCCCCCCCC >Mature Secondary Structure MKTLKDLGDLKGKRVLVRADFNVPLDGTTITDDGRIKAALPTIKTLREEGAKVILMAHLG CCCHHHHHCCCCCEEEEEECCCCCCCCCEECCCCEEEEHHHHHHHHHHCCCEEEEEEECC RPKGKVVPELSLAPVAARLGELLGTNVPLAKDTYGEDAQAKVAAMNDGDVVLLENVRFNP CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCC EETSKDADERAAYAKKIAALGEAFVSDGFGVVHRAQGSNYDVAADLPAAAGLLVEKEVKA CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEECCCHHHHHHHHHHHHH LSKATENPERPFTVVLGGSKVSDKLGVIENLLDKANRLVIGGGMVFTFLKAKGYEVGTSL HHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCEEEEECHHEEEHHHHCCCHHHHHH LEEDQLEKVKGYIETAEKNGVELVLPTDVVVNAGFPAGDTPVAPEVVAADAIPADKMGLD HHHHHHHHHHHHHHHHCCCCCEEEECCCEEEECCCCCCCCCCCCHHHHHCCCCCHHCCCC IGPESQKLFHDKIVDSKTVVWNGPMGVFEVPEFAAGTKAVAQGLVDATAAGAFTIVGGGD CCCCHHHHHHHHHCCCCEEEECCCCCCEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCC SASAVRNLGFPEDGFSHISTGGGASLEFLEGKELPGLKVLE CHHHHHHCCCCCCCHHHCCCCCCCEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA