| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691961
Identifier: 213691961
GI number: 213691961
Start: 1258550
End: 1260175
Strand: Direct
Name: 213691961
Synonym: Blon_1079
Alternate gene names: NA
Gene position: 1258550-1260175 (Clockwise)
Preceding gene: 213691960
Following gene: 213691962
Centisome position: 44.43
GC content: 66.61
Gene sequence:
>1626_bases GTGGCCGATGTGATGCGGGAGCTGGAACGGCTGCGACCGGTGTATGAGACGGGCGTCCTGCGGTTGCTGTTGCGCCAGAA CGCGATGCTGTACGTGTCGCTGCTGCGTTCCACGTTCGACCCGCTCACCGGCGAGCTGCCGCGCGAGACCGTGGAGGAGC GGTTCGCGCAAAGTCTGAACGCTCTGGCCGACGCCGGCGAATATGCGCCGCGCGAGGACCAGACCTTCGCCGCGGCCGCC CATCAGATCCTCGCCGACCTGACCCGTGAAGGCGAAGGCGACTACGCCTGGCTCGCCAACTCGCATGATGCGGCCACACA CCGATTCCTCTACCGTTTGACGGCCCGTGCCCACCGCGCCATCGAGGCGCTGAGCAGGCTCGAAGACGAATCACGCGCCC TGTCCGGCGCGCAGGCCAACAGCATCATCATGGAAATCGAGCACGCGCGCATGCAGCTGACCGCCGACCCCGGCGAGCGC ATCAAACTCCTCAACCGTGAAATCAAGGAACGCAAGCACGAGATCAAACGCATCCAACAGGGCAAGCAGCATGCCACGCT GAGCGAAGCCCAGGTGGAGGACGTGATCGCCGTGATCCACAACACGCTGCGCGGCGTGCCCATCGACCTGCGCGAACTCG TGCTCGACGAGCGGGACAACGGCGACGCCTTGCGCCGGCGCATGCAGGCCGGCGACATCAGCGTGGACGAGAACCTGACC CGCTACCACGATGAATACCGCCGCTCGTTCAGCGAATCGGACAGCGGCCGCCGCTTCGAGGACGCCTTCCAGGTGATCAT CACCGACGAGGGCCGCCAGCAAATCGACGAAGCCCTGCGCGCCATCGCCAAAACCCCGTATCTGGCCGGCGAATCCGGCC TGCTGCTTGGCCAGATACGCGACGAACTGGCCCGCATCTACGACGGCATCGAGGCCGTGCGTCGTCAGATGCGCGTCTCC GACGAGGCGATCAGCCGGCTCGTGCGCCAGCAAACCGACACTCGCTACCGTACGATGCTCACCCGCTTGAACCGACTGTA CGCGCGCCTCAACGCAGATGCGAAAACCCATATGGGAGACGCCTCGCGCCCGTGCGACACGGCCACCGCGGACGCGCTGT TCGCGCCATTGCCGATGCGCCCGGCCAAATCCATGACCCGCGCCACCGCACCCGGCCTGAGCGACCTCGCCGCCGAAGCC CCGCAGGCGACTCCGGTGGCCGATCTGCGGGATATGGTCAACAGCGGCGGCCCCCGACTCCTGCGCATGGTCAGTCTCAT CCGGCGCAACCCGGTGACCGTTGACAGGTCCGATGACAGGTCCGGCGCAACCCTCGTGGACATCGCCGCCAGCTTCAACC GGCTGCCCGAAAGCGAACGCCGCGAAAGCGAGATCGTCGGCTTCCTGGGCGGGCTGGGAGCCGCAAGCGGCAGCGCCATC GCTGACGAGCCGTCCACTGACGGCGTCGGCATCGACAGCGACATCGTCACTGAGCCGGCCCCGGCGCAGCGCGGCGATAC CGCGACCTGGCATTGCGTATCGATCGACGGCGAGCCCCGGAACTGGATCACTAGACCGGTGCTGGCCGACATGGACGAGC TGAACATCATTGTGGAGGAAGGATGA
Upstream 100 bases:
>100_bases ACATATTGGTGCTGGGCGGAGAGAGCACGCGTGGCGCGGGCGAGGTGTGGTTCGCGGCCATCGGCTAGTATGGTGCGGTC ACGACAGAGGGAGGCATGCT
Downstream 100 bases:
>100_bases CCGTGGCCGAGGAACACGAGGAACATATGGACAACGCCAACCCGTACGCCCTGTTCGAAGGCGACACCGGCGACATGCCG GCCGAGGCACGCATGGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 541; Mature: 540
Protein sequence:
>541_residues MADVMRELERLRPVYETGVLRLLLRQNAMLYVSLLRSTFDPLTGELPRETVEERFAQSLNALADAGEYAPREDQTFAAAA HQILADLTREGEGDYAWLANSHDAATHRFLYRLTARAHRAIEALSRLEDESRALSGAQANSIIMEIEHARMQLTADPGER IKLLNREIKERKHEIKRIQQGKQHATLSEAQVEDVIAVIHNTLRGVPIDLRELVLDERDNGDALRRRMQAGDISVDENLT RYHDEYRRSFSESDSGRRFEDAFQVIITDEGRQQIDEALRAIAKTPYLAGESGLLLGQIRDELARIYDGIEAVRRQMRVS DEAISRLVRQQTDTRYRTMLTRLNRLYARLNADAKTHMGDASRPCDTATADALFAPLPMRPAKSMTRATAPGLSDLAAEA PQATPVADLRDMVNSGGPRLLRMVSLIRRNPVTVDRSDDRSGATLVDIAASFNRLPESERRESEIVGFLGGLGAASGSAI ADEPSTDGVGIDSDIVTEPAPAQRGDTATWHCVSIDGEPRNWITRPVLADMDELNIIVEEG
Sequences:
>Translated_541_residues MADVMRELERLRPVYETGVLRLLLRQNAMLYVSLLRSTFDPLTGELPRETVEERFAQSLNALADAGEYAPREDQTFAAAA HQILADLTREGEGDYAWLANSHDAATHRFLYRLTARAHRAIEALSRLEDESRALSGAQANSIIMEIEHARMQLTADPGER IKLLNREIKERKHEIKRIQQGKQHATLSEAQVEDVIAVIHNTLRGVPIDLRELVLDERDNGDALRRRMQAGDISVDENLT RYHDEYRRSFSESDSGRRFEDAFQVIITDEGRQQIDEALRAIAKTPYLAGESGLLLGQIRDELARIYDGIEAVRRQMRVS DEAISRLVRQQTDTRYRTMLTRLNRLYARLNADAKTHMGDASRPCDTATADALFAPLPMRPAKSMTRATAPGLSDLAAEA PQATPVADLRDMVNSGGPRLLRMVSLIRRNPVTVDRSDDRSGATLVDIAASFNRLPESERRESEIVGFLGGLGAASGSAI ADEPSTDGVGIDSDIVTEPAPAQRGDTATWHCVSIDGEPRNWITRPVLADMDELNIIVEEG >Mature_540_residues ADVMRELERLRPVYETGVLRLLLRQNAMLYVSLLRSTFDPLTGELPRETVEERFAQSLNALADAGEYAPREDQTFAAAAH QILADLTREGEGDYAWLANSHDAATHRFLYRLTARAHRAIEALSRLEDESRALSGAQANSIIMEIEHARMQLTADPGERI KLLNREIKERKHEIKRIQQGKQHATLSEAQVEDVIAVIHNTLRGVPIDLRELVLDERDNGDALRRRMQAGDISVDENLTR YHDEYRRSFSESDSGRRFEDAFQVIITDEGRQQIDEALRAIAKTPYLAGESGLLLGQIRDELARIYDGIEAVRRQMRVSD EAISRLVRQQTDTRYRTMLTRLNRLYARLNADAKTHMGDASRPCDTATADALFAPLPMRPAKSMTRATAPGLSDLAAEAP QATPVADLRDMVNSGGPRLLRMVSLIRRNPVTVDRSDDRSGATLVDIAASFNRLPESERRESEIVGFLGGLGAASGSAIA DEPSTDGVGIDSDIVTEPAPAQRGDTATWHCVSIDGEPRNWITRPVLADMDELNIIVEEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60278; Mature: 60146
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADVMRELERLRPVYETGVLRLLLRQNAMLYVSLLRSTFDPLTGELPRETVEERFAQSLN CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH ALADAGEYAPREDQTFAAAAHQILADLTREGEGDYAWLANSHDAATHRFLYRLTARAHRA HHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHH IEALSRLEDESRALSGAQANSIIMEIEHARMQLTADPGERIKLLNREIKERKHEIKRIQQ HHHHHHHHHHHHHHCCCCHHHHHEEEEHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHC GKQHATLSEAQVEDVIAVIHNTLRGVPIDLRELVLDERDNGDALRRRMQAGDISVDENLT CHHHCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHH RYHDEYRRSFSESDSGRRFEDAFQVIITDEGRQQIDEALRAIAKTPYLAGESGLLLGQIR HHHHHHHHHHCCCCCCCHHHHHHEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH DELARIYDGIEAVRRQMRVSDEAISRLVRQQTDTRYRTMLTRLNRLYARLNADAKTHMGD HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCC ASRPCDTATADALFAPLPMRPAKSMTRATAPGLSDLAAEAPQATPVADLRDMVNSGGPRL CCCCCCCHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHCCCHHH LRMVSLIRRNPVTVDRSDDRSGATLVDIAASFNRLPESERRESEIVGFLGGLGAASGSAI HHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCC ADEPSTDGVGIDSDIVTEPAPAQRGDTATWHCVSIDGEPRNWITRPVLADMDELNIIVEE CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHCCHHHHCCCCCEEEEEC G C >Mature Secondary Structure ADVMRELERLRPVYETGVLRLLLRQNAMLYVSLLRSTFDPLTGELPRETVEERFAQSLN HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH ALADAGEYAPREDQTFAAAAHQILADLTREGEGDYAWLANSHDAATHRFLYRLTARAHRA HHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHH IEALSRLEDESRALSGAQANSIIMEIEHARMQLTADPGERIKLLNREIKERKHEIKRIQQ HHHHHHHHHHHHHHCCCCHHHHHEEEEHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHC GKQHATLSEAQVEDVIAVIHNTLRGVPIDLRELVLDERDNGDALRRRMQAGDISVDENLT CHHHCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHH RYHDEYRRSFSESDSGRRFEDAFQVIITDEGRQQIDEALRAIAKTPYLAGESGLLLGQIR HHHHHHHHHHCCCCCCCHHHHHHEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH DELARIYDGIEAVRRQMRVSDEAISRLVRQQTDTRYRTMLTRLNRLYARLNADAKTHMGD HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCC ASRPCDTATADALFAPLPMRPAKSMTRATAPGLSDLAAEAPQATPVADLRDMVNSGGPRL CCCCCCCHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHCCCHHH LRMVSLIRRNPVTVDRSDDRSGATLVDIAASFNRLPESERRESEIVGFLGGLGAASGSAI HHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCC ADEPSTDGVGIDSDIVTEPAPAQRGDTATWHCVSIDGEPRNWITRPVLADMDELNIIVEE CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHCCHHHHCCCCCEEEEEC G C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA