| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691962
Identifier: 213691962
GI number: 213691962
Start: 1260172
End: 1260834
Strand: Direct
Name: 213691962
Synonym: Blon_1080
Alternate gene names: NA
Gene position: 1260172-1260834 (Clockwise)
Preceding gene: 213691961
Following gene: 213691963
Centisome position: 44.49
GC content: 65.31
Gene sequence:
>663_bases ATGACCGTGGCCGAGGAACACGAGGAACATATGGACAACGCCAACCCGTACGCCCTGTTCGAAGGCGACACCGGCGACAT GCCGGCCGAGGCACGCATGGCCGCCATCGCCCTCAAACGCGACCGCTATATCAGCGGGCCCACCTACGACACCGTGCTCG ACAACCGCGACGCCGTCGTACGCTCCCTGAACAACGACCTGCTCGACTTGGTGATCAACGAACGCTACCGCATCATGTAC GCCACGCCCGTGGCCGGCGACGACGTGACCCTGCGCTCGCTCAAAACCCGCGTCAGCCTCAAACGCGAGGAGGCCGCGCT GCTCGCCTTCCTGCGCATCCGCGTCCTCGAATACGAGAACGTGCACGCCGACCCCGCCGACTGGCTCGTCAGCTTTGAGG AGATCCGCGCCGCGCTCGCCACCGGCGCCGGCTATCTGGCCGCCCGCAACGACGAGGAAGGCGTGGCAAAGCAGATCGGC GCCATCGTCTCCGCGATGATCACCTACGGGTATTTGGTGCGCCTGGACGACGAAGCCATGTACCAGATCACGCCGCTCGT GCCCGTGGTGCTCGACCGCGAACTGGCCGACACCTGGCTCGACGTCGTGGAACACGGCGACGGCGACACGGAAGATGACG ATGACGAGAAGGAAGCCGAATGA
Upstream 100 bases:
>100_bases CGACCTGGCATTGCGTATCGATCGACGGCGAGCCCCGGAACTGGATCACTAGACCGGTGCTGGCCGACATGGACGAGCTG AACATCATTGTGGAGGAAGG
Downstream 100 bases:
>100_bases TGCAGGCGACAGACGTGCAGATGATCGCGGACCGGTGGATGCTGGAATCCCGCCGACTCATCAACTGGGGCTCCTATGAG GGCTACCACGAATTCCGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MTVAEEHEEHMDNANPYALFEGDTGDMPAEARMAAIALKRDRYISGPTYDTVLDNRDAVVRSLNNDLLDLVINERYRIMY ATPVAGDDVTLRSLKTRVSLKREEAALLAFLRIRVLEYENVHADPADWLVSFEEIRAALATGAGYLAARNDEEGVAKQIG AIVSAMITYGYLVRLDDEAMYQITPLVPVVLDRELADTWLDVVEHGDGDTEDDDDEKEAE
Sequences:
>Translated_220_residues MTVAEEHEEHMDNANPYALFEGDTGDMPAEARMAAIALKRDRYISGPTYDTVLDNRDAVVRSLNNDLLDLVINERYRIMY ATPVAGDDVTLRSLKTRVSLKREEAALLAFLRIRVLEYENVHADPADWLVSFEEIRAALATGAGYLAARNDEEGVAKQIG AIVSAMITYGYLVRLDDEAMYQITPLVPVVLDRELADTWLDVVEHGDGDTEDDDDEKEAE >Mature_219_residues TVAEEHEEHMDNANPYALFEGDTGDMPAEARMAAIALKRDRYISGPTYDTVLDNRDAVVRSLNNDLLDLVINERYRIMYA TPVAGDDVTLRSLKTRVSLKREEAALLAFLRIRVLEYENVHADPADWLVSFEEIRAALATGAGYLAARNDEEGVAKQIGA IVSAMITYGYLVRLDDEAMYQITPLVPVVLDRELADTWLDVVEHGDGDTEDDDDEKEAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24609; Mature: 24478
Theoretical pI: Translated: 4.06; Mature: 4.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVAEEHEEHMDNANPYALFEGDTGDMPAEARMAAIALKRDRYISGPTYDTVLDNRDAVV CCCCHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHH RSLNNDLLDLVINERYRIMYATPVAGDDVTLRSLKTRVSLKREEAALLAFLRIRVLEYEN HHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VHADPADWLVSFEEIRAALATGAGYLAARNDEEGVAKQIGAIVSAMITYGYLVRLDDEAM CCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHEEEEECCCCE YQITPLVPVVLDRELADTWLDVVEHGDGDTEDDDDEKEAE EEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure TVAEEHEEHMDNANPYALFEGDTGDMPAEARMAAIALKRDRYISGPTYDTVLDNRDAVV CCCHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHH RSLNNDLLDLVINERYRIMYATPVAGDDVTLRSLKTRVSLKREEAALLAFLRIRVLEYEN HHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VHADPADWLVSFEEIRAALATGAGYLAARNDEEGVAKQIGAIVSAMITYGYLVRLDDEAM CCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHEEEEECCCCE YQITPLVPVVLDRELADTWLDVVEHGDGDTEDDDDEKEAE EEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA