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The map label for this gene is yhbO [C]

Identifier: 213691946

GI number: 213691946

Start: 1245486

End: 1245929

Strand: Reverse

Name: yhbO [C]

Synonym: Blon_1062

Alternate gene names: 213691946

Gene position: 1245929-1245486 (Counterclockwise)

Preceding gene: 213691950

Following gene: 213691935

Centisome position: 43.98

GC content: 64.64

Gene sequence:

>444_bases
GTGACGCTTGCCGCCACTACCTTGGACCCGTGTGAGACGGTGCAGCACGACCGCTACGAAGGTGCAACGCTGACCCCGGA
CGCGCGCCTGTCCGATGTGCAGGCTGCCGACTACGACCTGCTGGTGGTGCCCGGCGGCACCTGCAATGTGGATCGTATCC
GCGTCAATGAGGATGCGATCACGCTGGCGCAGGAGTTCACGCACGAAGGCAAACCGATCGCCGCGCCCTGCCATGGCGCG
TGGCTGCTGGTCAACGCGGGTCTGGTGGCTGGCAAGACCGCCGCGCCCTGCCGCTATATCGCCGCTGATATCGAGAACGC
GGGCGGTCATTACGTCGACGAGCAGCTGCACGTGGACGACGCCAACGGCTTCAAGCTCATCACGTCCCGCAAGCCCGACG
ATCTGGACTACTTCGTGGGCGCAATCAAGGATGCGCTGAAGTGA

Upstream 100 bases:

>100_bases
AGACTACCTACCGCCCGTTACATGCGCCGCACCAGTTTCTGGAATATGAGAATCCGAGCTGACGCGCCCGCTGCGCGATC
TCAAGGCCGCCGGCGCCAAG

Downstream 100 bases:

>100_bases
CGGAATCGGCCGCAGGCGATTCCGTCACCGAAACTACCGCTCCTTGGCGGCCAACTGCCCGCAGGCACCGTCAATATCCT
GGCCGCGGGTGTCACGCAGT

Product: ThiJ/PfpI domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MTLAATTLDPCETVQHDRYEGATLTPDARLSDVQAADYDLLVVPGGTCNVDRIRVNEDAITLAQEFTHEGKPIAAPCHGA
WLLVNAGLVAGKTAAPCRYIAADIENAGGHYVDEQLHVDDANGFKLITSRKPDDLDYFVGAIKDALK

Sequences:

>Translated_147_residues
MTLAATTLDPCETVQHDRYEGATLTPDARLSDVQAADYDLLVVPGGTCNVDRIRVNEDAITLAQEFTHEGKPIAAPCHGA
WLLVNAGLVAGKTAAPCRYIAADIENAGGHYVDEQLHVDDANGFKLITSRKPDDLDYFVGAIKDALK
>Mature_146_residues
TLAATTLDPCETVQHDRYEGATLTPDARLSDVQAADYDLLVVPGGTCNVDRIRVNEDAITLAQEFTHEGKPIAAPCHGAW
LLVNAGLVAGKTAAPCRYIAADIENAGGHYVDEQLHVDDANGFKLITSRKPDDLDYFVGAIKDALK

Specific function: Unknown

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PfpI endopeptidase domain [H]

Homologues:

Organism=Escherichia coli, GI87082219, Length=127, Percent_Identity=35.4330708661417, Blast_Score=84, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006286
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 15779; Mature: 15648

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLAATTLDPCETVQHDRYEGATLTPDARLSDVQAADYDLLVVPGGTCNVDRIRVNEDAI
CEEECCCCCHHHHHCCCCCCCCEECCCCCCCCCCCCCCCEEEECCCCCCCEEEEECCHHH
TLAQEFTHEGKPIAAPCHGAWLLVNAGLVAGKTAAPCRYIAADIENAGGHYVDEQLHVDD
HHHHHHHCCCCCEECCCCCEEEEEECCEECCCCCCCCEEEEEECCCCCCCEECCEEEEEC
ANGFKLITSRKPDDLDYFVGAIKDALK
CCCEEEEECCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
TLAATTLDPCETVQHDRYEGATLTPDARLSDVQAADYDLLVVPGGTCNVDRIRVNEDAI
EEECCCCCHHHHHCCCCCCCCEECCCCCCCCCCCCCCCEEEECCCCCCCEEEEECCHHH
TLAQEFTHEGKPIAAPCHGAWLLVNAGLVAGKTAAPCRYIAADIENAGGHYVDEQLHVDD
HHHHHHHCCCCCEECCCCCEEEEEECCEECCCCCCCCEEEEEECCCCCCCEECCEEEEEC
ANGFKLITSRKPDDLDYFVGAIKDALK
CCCEEEEECCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]