| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691937
Identifier: 213691937
GI number: 213691937
Start: 1236198
End: 1236689
Strand: Direct
Name: 213691937
Synonym: Blon_1053
Alternate gene names: NA
Gene position: 1236198-1236689 (Clockwise)
Preceding gene: 213691936
Following gene: 213691938
Centisome position: 43.64
GC content: 54.67
Gene sequence:
>492_bases ATGGAGTATTCGGGATTTTTCCACGGCACATATCAGTACGGGCCGTTGCCGAGTTATGACGGATTCATCGTTGTGGAGCT GTCGGATCGCCCGGTGCGGTATCACATCCAACCCACATTCATAGGCGGGCTGAATGCGAAGGAATGTCATTCCATGGCCA TGGCTGCATGCCGCATCGCCTGCACATCGGCGGACGCGATACGTGGCAAACTCAGCGTCGCACATCTCAACAGAGCCATG ACAAAACCATGCCTGGACCGGCTGCAAACCATGCAATACCTGCTCGGCACCCACATGGTCACTCATCCGGAGCTCAAAGC GAAATTCTGCTATCTGCCCACTGTCCCCACATTGATCGACGGCATGATCACCGGCAAGGACACGCTGGAAATGGCGGTAT TCATGACCATCGGCCAGGAAAATCTGCGAGTCAACCTCAAACTGAAGTACATCGGTTCCCGATGGATGTGCATCTATGCC GATCTGGGCTGA
Upstream 100 bases:
>100_bases AGGCGCGCTCAAGTCGTTTGACTTGGCGCGCCTTTCGTGATGTTGTAGTACAGACGCTCGCCGATGATGGTGAGTTGCAA GGGGGCTTGAAGGGGTCATC
Downstream 100 bases:
>100_bases CCAGACGGCCCCGCCCGCACACCGATTCCTACGCTGGTAGCGGAAGACGGTTCTGCCGTGTCATAGGCTGGTTCGCCTAT AGTAGTGATCATGCGTGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MEYSGFFHGTYQYGPLPSYDGFIVVELSDRPVRYHIQPTFIGGLNAKECHSMAMAACRIACTSADAIRGKLSVAHLNRAM TKPCLDRLQTMQYLLGTHMVTHPELKAKFCYLPTVPTLIDGMITGKDTLEMAVFMTIGQENLRVNLKLKYIGSRWMCIYA DLG
Sequences:
>Translated_163_residues MEYSGFFHGTYQYGPLPSYDGFIVVELSDRPVRYHIQPTFIGGLNAKECHSMAMAACRIACTSADAIRGKLSVAHLNRAM TKPCLDRLQTMQYLLGTHMVTHPELKAKFCYLPTVPTLIDGMITGKDTLEMAVFMTIGQENLRVNLKLKYIGSRWMCIYA DLG >Mature_163_residues MEYSGFFHGTYQYGPLPSYDGFIVVELSDRPVRYHIQPTFIGGLNAKECHSMAMAACRIACTSADAIRGKLSVAHLNRAM TKPCLDRLQTMQYLLGTHMVTHPELKAKFCYLPTVPTLIDGMITGKDTLEMAVFMTIGQENLRVNLKLKYIGSRWMCIYA DLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18305; Mature: 18305
Theoretical pI: Translated: 8.36; Mature: 8.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 6.1 %Met (Translated Protein) 9.8 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 6.1 %Met (Mature Protein) 9.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYSGFFHGTYQYGPLPSYDGFIVVELSDRPVRYHIQPTFIGGLNAKECHSMAMAACRIA CCCCCEEECEEECCCCCCCCCEEEEEECCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHH CTSADAIRGKLSVAHLNRAMTKPCLDRLQTMQYLLGTHMVTHPELKAKFCYLPTVPTLID CCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCEEEEECCCHHHHHC GMITGKDTLEMAVFMTIGQENLRVNLKLKYIGSRWMCIYADLG CCCCCCCHHEEEEEEEECCCCEEEEEEEEEECCCEEEEEEECC >Mature Secondary Structure MEYSGFFHGTYQYGPLPSYDGFIVVELSDRPVRYHIQPTFIGGLNAKECHSMAMAACRIA CCCCCEEECEEECCCCCCCCCEEEEEECCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHH CTSADAIRGKLSVAHLNRAMTKPCLDRLQTMQYLLGTHMVTHPELKAKFCYLPTVPTLID CCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCEEEEECCCHHHHHC GMITGKDTLEMAVFMTIGQENLRVNLKLKYIGSRWMCIYADLG CCCCCCCHHEEEEEEEECCCCEEEEEEEEEECCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA