| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is guaB [C]
Identifier: 213691936
GI number: 213691936
Start: 1234913
End: 1236037
Strand: Direct
Name: guaB [C]
Synonym: Blon_1052
Alternate gene names: 213691936
Gene position: 1234913-1236037 (Clockwise)
Preceding gene: 213691933
Following gene: 213691937
Centisome position: 43.59
GC content: 68.44
Gene sequence:
>1125_bases ATGTCTCAGGAAATTGAAATCGGTTTGGGCAAAAAGGGCCGTCTCGGCTACGCACTCGACGATGTGGCGATCGTCCCCTC CCGTCGCACCCGCGACCCCGAGGACGTCTCCACCTCTTGGCAGATCGACGCCTATGAGTTCGATGTGCCGGTGATCGGCG CCCCCATGGATTCGGTGACCAGCCCGGCCACCGCCATCGCCATGGGCAAGATGGGCGCGCTCGGCGTGCTCGATTTGGAA GGTCTGTGGACCCGTTACGAGGACCCGACCCCGCTGTTGGACGAAATCGCCGGGCTGCCGGCCGATCAGGCCACCGAACG TATCCAGCAGATCTATGCCGAGCCGGTCAAGCCGGAGCTCATCACGCAACGTCTGCACGAGATTCGCGCCGCCGGCGTCA CCGTGGCCGGCGCGCTCTCCCCGCAGCGCACCCAGCAGTTCTACTCCACCGTGGTGGACGCGGGCGTGGACCTGTTCGTG ATCCGCGGCACTGTGGTCTCCGCCGAGCACGTCTCTTCCGGCCAGGAACCGCTGAACCTCAAGAAGTTCATCTACGACCT TGACGTGCCCGTCATCGTCGGCGGCGCATCCAACTACACCGCCGCCCTGCACCTGATGCGCACCGGCGCGGCCGGCGTGC TCGTCGGCTTCGGCGGCGGCGCGGTCTCCGCCACTCGCCAGACCATCGGCGTGCAGGCCCCGATGGCCACCGCCATCGCC GACGTGGCCGAGGCCCGCCGCGACTACATGGACGAATCCGGCGGCCGCTACGTGCAGGTCATCGCCGACGGCGGCATGGG CGACTCCGGCAGCTTCGTCAAGGCCCTGGCCCTCGGCGCCGACGCGGTCATGCTCGGCGCGCCGCTGGCCCGCGCCACCG AGGCCCCCGGCAAGGGCACCCACTGGGGTTCCGAAGCCCGCCACCAGACGCTGCCGCGCGGCTCCCGCACCACGGTCGGC ACGGTCGGCCCGCTCGAACAGGTGCTGTTCGGACCGAGCCACCAGGCGGACGGCAAGACCAACTTCATCGGCGCCCTCAA GCGCGCGATGGCCTCCACCGGCTACGTCGACGTGAAGAACTTCCAGCGTTGCGGCATGGTGGTCAACCCGTATTCCGCAC GATAA
Upstream 100 bases:
>100_bases TGATTTAGTCATAGCGCATGTTTGTAACGACTTGAAGCAATCGTCCGGTCCGTGGGAAACGGCCTTGTTGGCGTCCCACC CGGGCAATAGGCTTACAACC
Downstream 100 bases:
>100_bases TCCCGATTACCCCCTGAAGATGGGGGTTTGCCCTCCATGCAGGAGGCTTAACTTGCCCGAAGGCGCGCTCAAGTCGTTTG ACTTGGCGCGCCTTTCGTGA
Product: inosine 5-monophosphate dehydrogenase
Products: xanthosine 5'-phosphate; NADH; H+
Alternate protein names: NA
Number of amino acids: Translated: 374; Mature: 373
Protein sequence:
>374_residues MSQEIEIGLGKKGRLGYALDDVAIVPSRRTRDPEDVSTSWQIDAYEFDVPVIGAPMDSVTSPATAIAMGKMGALGVLDLE GLWTRYEDPTPLLDEIAGLPADQATERIQQIYAEPVKPELITQRLHEIRAAGVTVAGALSPQRTQQFYSTVVDAGVDLFV IRGTVVSAEHVSSGQEPLNLKKFIYDLDVPVIVGGASNYTAALHLMRTGAAGVLVGFGGGAVSATRQTIGVQAPMATAIA DVAEARRDYMDESGGRYVQVIADGGMGDSGSFVKALALGADAVMLGAPLARATEAPGKGTHWGSEARHQTLPRGSRTTVG TVGPLEQVLFGPSHQADGKTNFIGALKRAMASTGYVDVKNFQRCGMVVNPYSAR
Sequences:
>Translated_374_residues MSQEIEIGLGKKGRLGYALDDVAIVPSRRTRDPEDVSTSWQIDAYEFDVPVIGAPMDSVTSPATAIAMGKMGALGVLDLE GLWTRYEDPTPLLDEIAGLPADQATERIQQIYAEPVKPELITQRLHEIRAAGVTVAGALSPQRTQQFYSTVVDAGVDLFV IRGTVVSAEHVSSGQEPLNLKKFIYDLDVPVIVGGASNYTAALHLMRTGAAGVLVGFGGGAVSATRQTIGVQAPMATAIA DVAEARRDYMDESGGRYVQVIADGGMGDSGSFVKALALGADAVMLGAPLARATEAPGKGTHWGSEARHQTLPRGSRTTVG TVGPLEQVLFGPSHQADGKTNFIGALKRAMASTGYVDVKNFQRCGMVVNPYSAR >Mature_373_residues SQEIEIGLGKKGRLGYALDDVAIVPSRRTRDPEDVSTSWQIDAYEFDVPVIGAPMDSVTSPATAIAMGKMGALGVLDLEG LWTRYEDPTPLLDEIAGLPADQATERIQQIYAEPVKPELITQRLHEIRAAGVTVAGALSPQRTQQFYSTVVDAGVDLFVI RGTVVSAEHVSSGQEPLNLKKFIYDLDVPVIVGGASNYTAALHLMRTGAAGVLVGFGGGAVSATRQTIGVQAPMATAIAD VAEARRDYMDESGGRYVQVIADGGMGDSGSFVKALALGADAVMLGAPLARATEAPGKGTHWGSEARHQTLPRGSRTTVGT VGPLEQVLFGPSHQADGKTNFIGALKRAMASTGYVDVKNFQRCGMVVNPYSAR
Specific function: GMP biosynthesis from IMP; first step. [C]
COG id: COG0516
COG function: function code F; IMP dehydrogenase/GMP reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the IMPDH/GMPR family [H]
Homologues:
Organism=Homo sapiens, GI66933016, Length=147, Percent_Identity=37.4149659863946, Blast_Score=73, Evalue=5e-13, Organism=Homo sapiens, GI217035152, Length=108, Percent_Identity=40.7407407407407, Blast_Score=69, Evalue=9e-12, Organism=Homo sapiens, GI217035148, Length=110, Percent_Identity=40, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI34328928, Length=108, Percent_Identity=40.7407407407407, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI34328930, Length=108, Percent_Identity=40.7407407407407, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI217035146, Length=110, Percent_Identity=40, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI156616279, Length=108, Percent_Identity=40.7407407407407, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI217035150, Length=110, Percent_Identity=40, Blast_Score=68, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71994385, Length=178, Percent_Identity=33.1460674157303, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI71994389, Length=178, Percent_Identity=33.1460674157303, Blast_Score=77, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6323464, Length=150, Percent_Identity=32.6666666666667, Blast_Score=72, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6323585, Length=150, Percent_Identity=32.6666666666667, Blast_Score=71, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6322012, Length=152, Percent_Identity=31.5789473684211, Blast_Score=65, Evalue=1e-11, Organism=Drosophila melanogaster, GI24641071, Length=111, Percent_Identity=38.7387387387387, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI24641073, Length=111, Percent_Identity=38.7387387387387, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI28571163, Length=111, Percent_Identity=38.7387387387387, Blast_Score=69, Evalue=5e-12,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR001093 - InterPro: IPR005992 [H]
Pfam domain/function: PF00478 IMPDH [H]
EC number: 1.1.1.205
Molecular weight: Translated: 39427; Mature: 39296
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQEIEIGLGKKGRLGYALDDVAIVPSRRTRDPEDVSTSWQIDAYEFDVPVIGAPMDSVT CCCCEEECCCCCCCCCEEECCEEECCCCCCCCCCCCCCCEEEEEEEECCCEECCCHHHHC SPATAIAMGKMGALGVLDLEGLWTRYEDPTPLLDEIAGLPADQATERIQQIYAEPVKPEL CCHHHHHHCCCCCCEEEECCHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCHHH ITQRLHEIRAAGVTVAGALSPQRTQQFYSTVVDAGVDLFVIRGTVVSAEHVSSGQEPLNL HHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCEEEEEECEEEEHHHHCCCCCCCCH KKFIYDLDVPVIVGGASNYTAALHLMRTGAAGVLVGFGGGAVSATRQTIGVQAPMATAIA HHHHHHCCCCEEEECCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHCCCCHHHHHHH DVAEARRDYMDESGGRYVQVIADGGMGDSGSFVKALALGADAVMLGAPLARATEAPGKGT HHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHCCCHHHHCCCHHHHCCCCCCCC HWGSEARHQTLPRGSRTTVGTVGPLEQVLFGPSHQADGKTNFIGALKRAMASTGYVDVKN CCCCHHHHHCCCCCCCCEECCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCEECCC FQRCGMVVNPYSAR HHHCCCEECCCCCC >Mature Secondary Structure SQEIEIGLGKKGRLGYALDDVAIVPSRRTRDPEDVSTSWQIDAYEFDVPVIGAPMDSVT CCCEEECCCCCCCCCEEECCEEECCCCCCCCCCCCCCCEEEEEEEECCCEECCCHHHHC SPATAIAMGKMGALGVLDLEGLWTRYEDPTPLLDEIAGLPADQATERIQQIYAEPVKPEL CCHHHHHHCCCCCCEEEECCHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCHHH ITQRLHEIRAAGVTVAGALSPQRTQQFYSTVVDAGVDLFVIRGTVVSAEHVSSGQEPLNL HHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCEEEEEECEEEEHHHHCCCCCCCCH KKFIYDLDVPVIVGGASNYTAALHLMRTGAAGVLVGFGGGAVSATRQTIGVQAPMATAIA HHHHHHCCCCEEEECCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHCCCCHHHHHHH DVAEARRDYMDESGGRYVQVIADGGMGDSGSFVKALALGADAVMLGAPLARATEAPGKGT HHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHCCCHHHHCCCHHHHCCCCCCCC HWGSEARHQTLPRGSRTTVGTVGPLEQVLFGPSHQADGKTNFIGALKRAMASTGYVDVKN CCCCHHHHHCCCCCCCCEECCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCEECCC FQRCGMVVNPYSAR HHHCCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NAD+ [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: inosine 5'-phosphate; NAD+; H2O
Specific reaction: inosine 5'-phosphate + NAD+ + H2O = xanthosine 5'-phosphate + NADH + H+
General reaction: Redox reaction [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA