| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691916
Identifier: 213691916
GI number: 213691916
Start: 1214255
End: 1215157
Strand: Direct
Name: 213691916
Synonym: Blon_1028
Alternate gene names: NA
Gene position: 1214255-1215157 (Clockwise)
Preceding gene: 213691915
Following gene: 213691917
Centisome position: 42.86
GC content: 39.98
Gene sequence:
>903_bases TTGTATTTACAGGGAGGCGAGTCAACCCTTTTAGGCGAGGATTTGCTTAGCATCATATCCTACTGTTCAAGCATTGGTCT AGGAACACGTTTGGTGACAAACGGCTCGTGGGCGATTAACAACTGTGCTACAGAGGATATGATCCTCTATTTATTGGAGT CCGGTCTCAATGAACTCAACATATCTACCGATGATTTTCATGCTAAAGAGGTTTCCTTAGATTGCGTTAGGAGGATCTGG AAATGCGCAAAAGGACGAGGATTTAGTGCGGTTATTTTGGGTGTATGTAGTGGTCCCGAGAGCAGAGTAACACCTCAGTT TTTAGAGACATTTTTAGGGGAAAAAATTCCTTATATATACGACGCAATGGGAAACAAACAAATCCCTGAGCCAAATCAGG ACGGAACAGTATACGCAATTTCAAATACTGGCATAGCACCTTTGGGGAGAGGGCACCATTTAAAAGATGGCTGGTTTCGA AAAACTAGAAGAGTGGAGCATCCATTTATCGGAAGATGTCCAAACATATATAAACCCTTGACACTAATGGCAGATGGAAC AATCGGCGCATGTTGTGGCATCAATTGTGAACGGACGTCGATTCTTTCCATTAAAAATATATACAACAACGAAAGCTATT TTTCCGACGGAAAACCTTCATATGAACAGCAAATAATTATCTGTGCACTTGATGTCTTAGGCCCAGCATATTTATACACT ATTGCAACGGGAGATGCATGTGAACATATCAGAGGAATAAATATATCGTCGTGCCAGATATGTGAGTTTCTGTTCCGAGA TAATTCTCTGACCAATAAATTATTCCGGTCAATAGATCAAATTGAATTTGACGTAATAAGTCAACTAGTATCTATTGATA TATCTACCCCAATTCTTAACTAG
Upstream 100 bases:
>100_bases TGTCTGATGATGTCTGGCCCTTCGCGAAAAGAAAAACTGTCATATCTTTTAATGAAGCGCTTCATTGATTCATTAAGGGC AAAATCAAAGTTAAATACTG
Downstream 100 bases:
>100_bases GGGTTTTGGATGAATACTAGACTATTTTTTAATAGCGAATCTATTGATATTGACGATGGATATTTCTTACGCTTGGCATT ATCTAATAGTGGATATCTAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MYLQGGESTLLGEDLLSIISYCSSIGLGTRLVTNGSWAINNCATEDMILYLLESGLNELNISTDDFHAKEVSLDCVRRIW KCAKGRGFSAVILGVCSGPESRVTPQFLETFLGEKIPYIYDAMGNKQIPEPNQDGTVYAISNTGIAPLGRGHHLKDGWFR KTRRVEHPFIGRCPNIYKPLTLMADGTIGACCGINCERTSILSIKNIYNNESYFSDGKPSYEQQIIICALDVLGPAYLYT IATGDACEHIRGINISSCQICEFLFRDNSLTNKLFRSIDQIEFDVISQLVSIDISTPILN
Sequences:
>Translated_300_residues MYLQGGESTLLGEDLLSIISYCSSIGLGTRLVTNGSWAINNCATEDMILYLLESGLNELNISTDDFHAKEVSLDCVRRIW KCAKGRGFSAVILGVCSGPESRVTPQFLETFLGEKIPYIYDAMGNKQIPEPNQDGTVYAISNTGIAPLGRGHHLKDGWFR KTRRVEHPFIGRCPNIYKPLTLMADGTIGACCGINCERTSILSIKNIYNNESYFSDGKPSYEQQIIICALDVLGPAYLYT IATGDACEHIRGINISSCQICEFLFRDNSLTNKLFRSIDQIEFDVISQLVSIDISTPILN >Mature_300_residues MYLQGGESTLLGEDLLSIISYCSSIGLGTRLVTNGSWAINNCATEDMILYLLESGLNELNISTDDFHAKEVSLDCVRRIW KCAKGRGFSAVILGVCSGPESRVTPQFLETFLGEKIPYIYDAMGNKQIPEPNQDGTVYAISNTGIAPLGRGHHLKDGWFR KTRRVEHPFIGRCPNIYKPLTLMADGTIGACCGINCERTSILSIKNIYNNESYFSDGKPSYEQQIIICALDVLGPAYLYT IATGDACEHIRGINISSCQICEFLFRDNSLTNKLFRSIDQIEFDVISQLVSIDISTPILN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33190; Mature: 33190
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYLQGGESTLLGEDLLSIISYCSSIGLGTRLVTNGSWAINNCATEDMILYLLESGLNELN CCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCEEECCCCHHHHHHHHHHHCCCCCC ISTDDFHAKEVSLDCVRRIWKCAKGRGFSAVILGVCSGPESRVTPQFLETFLGEKIPYIY CCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHHHHCCCCCCHH DAMGNKQIPEPNQDGTVYAISNTGIAPLGRGHHLKDGWFRKTRRVEHPFIGRCPNIYKPL HCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCE TLMADGTIGACCGINCERTSILSIKNIYNNESYFSDGKPSYEQQIIICALDVLGPAYLYT EEEECCCCCEEECCCCCCHHHEEHHHHHCCCCCCCCCCCCHHHEEEEEEHHHHCCEEEEE IATGDACEHIRGINISSCQICEFLFRDNSLTNKLFRSIDQIEFDVISQLVSIDISTPILN EECCHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MYLQGGESTLLGEDLLSIISYCSSIGLGTRLVTNGSWAINNCATEDMILYLLESGLNELN CCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCEEECCCCHHHHHHHHHHHCCCCCC ISTDDFHAKEVSLDCVRRIWKCAKGRGFSAVILGVCSGPESRVTPQFLETFLGEKIPYIY CCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHHHHCCCCCCHH DAMGNKQIPEPNQDGTVYAISNTGIAPLGRGHHLKDGWFRKTRRVEHPFIGRCPNIYKPL HCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCE TLMADGTIGACCGINCERTSILSIKNIYNNESYFSDGKPSYEQQIIICALDVLGPAYLYT EEEECCCCCEEECCCCCCHHHEEHHHHHCCCCCCCCCCCCHHHEEEEEEHHHHCCEEEEE IATGDACEHIRGINISSCQICEFLFRDNSLTNKLFRSIDQIEFDVISQLVSIDISTPILN EECCHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA