| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691917
Identifier: 213691917
GI number: 213691917
Start: 1215167
End: 1216303
Strand: Direct
Name: 213691917
Synonym: Blon_1029
Alternate gene names: NA
Gene position: 1215167-1216303 (Clockwise)
Preceding gene: 213691916
Following gene: 213691918
Centisome position: 42.9
GC content: 39.05
Gene sequence:
>1137_bases ATGAATACTAGACTATTTTTTAATAGCGAATCTATTGATATTGACGATGGATATTTCTTACGCTTGGCATTATCTAATAG TGGATATCTAGATTTGTTGTCGGCTGTCCCTCCCGCGGCTGATGTAATTGGTACAATCAGCTCTATTTACGAGGAGTTAC AAGAGCCTTTAAAGTACATTTGCGATCTGCTTCTTTTTGGAAAAACCGTTTGTATGGAAAAATTGCCTGAAGCTCTTGTT GAGTCTATATTAAAAATTAGAGAATCTGGGCTCATCGCATTGAGGGGAAATGCCGTTTCGTTAAATAATCTTTATTTACA GTTGGTCGATGGATTATTATATTTTTCGGAATTGCCTCATGGAAGACAAACTCTATATTATGGCACGGATTCTTACGCAT TGGCCTGTCGTTTGGGGACCGCCCCTTCTAGGAATAATGTTCTCGACTACTGTGCCGGTCCAGGAATTCAAGGATTGCTA TCTGCATCGCATGGCGCACACGTAACCGCTGTGGAGGTTAATCCTCTTGCATCGGAGCTCTCCTTATGCAATGCTAGATT GAATAAGCTAGATAACCTCTTTAATGTAATAAACAAATCGGTTATTGAATCCGAAACGGATTTGAAAAATTTAAGATTTG ATTTTATCTGCGCGAATCCGCCACTTCTTCCAATTCCATTTAATCTTAATTATCCGTTTGTTGGAGATGGCGGCACAGAT GGATTAAGCATTTTTCGACAAATAATGAATTATGGTATTCCTCATTTGTCGAGAAATGGCAAGATTGTAACTCTTGGACT TTCAGGTGGTAGCGAGGTTGGGCCAGATATTTACTGTCTAGCCGAGCAACTTCAGATGAAGTATCAGATGAAGTTTATTC TTATCATCCTATCTCGGGTTGAGATTACCCCCAGATCCCTATGGATTCAATATATGGCGGATACGATCAATATGTATTCT CTGGGTGAGAATACGGTCTCATGCAATGAAGTCTTTGAATCTTATCAGAATGAGGATATTAGCTTTGTCTACTCATACAC ACTCTCCGCTATCAATAATAAATGTTATGGCAGAGATTTTACAGTGATTGAATGTGACGACAAAAGTCAGCCGTTAACTC AATGGTGGATATCATAA
Upstream 100 bases:
>100_bases CAATAAATTATTCCGGTCAATAGATCAAATTGAATTTGACGTAATAAGTCAACTAGTATCTATTGATATATCTACCCCAA TTCTTAACTAGGGGTTTTGG
Downstream 100 bases:
>100_bases CATAGTTTTATTTCTTGAATGAGATAACACGAACGTCATATATCTCAGATATTTTCGTGGAATACCGAGTTTACTCTTTG CAAGGTTGATATATATGATT
Product: Methylase of polypeptide chain release factors-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 378; Mature: 378
Protein sequence:
>378_residues MNTRLFFNSESIDIDDGYFLRLALSNSGYLDLLSAVPPAADVIGTISSIYEELQEPLKYICDLLLFGKTVCMEKLPEALV ESILKIRESGLIALRGNAVSLNNLYLQLVDGLLYFSELPHGRQTLYYGTDSYALACRLGTAPSRNNVLDYCAGPGIQGLL SASHGAHVTAVEVNPLASELSLCNARLNKLDNLFNVINKSVIESETDLKNLRFDFICANPPLLPIPFNLNYPFVGDGGTD GLSIFRQIMNYGIPHLSRNGKIVTLGLSGGSEVGPDIYCLAEQLQMKYQMKFILIILSRVEITPRSLWIQYMADTINMYS LGENTVSCNEVFESYQNEDISFVYSYTLSAINNKCYGRDFTVIECDDKSQPLTQWWIS
Sequences:
>Translated_378_residues MNTRLFFNSESIDIDDGYFLRLALSNSGYLDLLSAVPPAADVIGTISSIYEELQEPLKYICDLLLFGKTVCMEKLPEALV ESILKIRESGLIALRGNAVSLNNLYLQLVDGLLYFSELPHGRQTLYYGTDSYALACRLGTAPSRNNVLDYCAGPGIQGLL SASHGAHVTAVEVNPLASELSLCNARLNKLDNLFNVINKSVIESETDLKNLRFDFICANPPLLPIPFNLNYPFVGDGGTD GLSIFRQIMNYGIPHLSRNGKIVTLGLSGGSEVGPDIYCLAEQLQMKYQMKFILIILSRVEITPRSLWIQYMADTINMYS LGENTVSCNEVFESYQNEDISFVYSYTLSAINNKCYGRDFTVIECDDKSQPLTQWWIS >Mature_378_residues MNTRLFFNSESIDIDDGYFLRLALSNSGYLDLLSAVPPAADVIGTISSIYEELQEPLKYICDLLLFGKTVCMEKLPEALV ESILKIRESGLIALRGNAVSLNNLYLQLVDGLLYFSELPHGRQTLYYGTDSYALACRLGTAPSRNNVLDYCAGPGIQGLL SASHGAHVTAVEVNPLASELSLCNARLNKLDNLFNVINKSVIESETDLKNLRFDFICANPPLLPIPFNLNYPFVGDGGTD GLSIFRQIMNYGIPHLSRNGKIVTLGLSGGSEVGPDIYCLAEQLQMKYQMKFILIILSRVEITPRSLWIQYMADTINMYS LGENTVSCNEVFESYQNEDISFVYSYTLSAINNKCYGRDFTVIECDDKSQPLTQWWIS
Specific function: Unknown
COG id: COG2890
COG function: function code J; Methylase of polypeptide chain release factors
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42098; Mature: 42098
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTRLFFNSESIDIDDGYFLRLALSNSGYLDLLSAVPPAADVIGTISSIYEELQEPLKYI CCCEEEECCCCEECCCCEEEEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH CDLLLFGKTVCMEKLPEALVESILKIRESGLIALRGNAVSLNNLYLQLVDGLLYFSELPH HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCEEEHHHHHHHHHHHHHHHHHCCC GRQTLYYGTDSYALACRLGTAPSRNNVLDYCAGPGIQGLLSASHGAHVTAVEVNPLASEL CCEEEEECCCCEEEEEEECCCCCCCCEEHHHCCCCHHHHHHCCCCCEEEEEECCCHHHHH SLCNARLNKLDNLFNVINKSVIESETDLKNLRFDFICANPPLLPIPFNLNYPFVGDGGTD HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCEEEEEECCCCEEEEEECCCCCEECCCCCH GLSIFRQIMNYGIPHLSRNGKIVTLGLSGGSEVGPDIYCLAEQLQMKYQMKFILIILSRV HHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC EITPRSLWIQYMADTINMYSLGENTVSCNEVFESYQNEDISFVYSYTLSAINNKCYGRDF CCCHHHHHHHHHHHHHHHEECCCCCEEHHHHHHHHCCCCCEEEHHHHHHHHCCCCCCCCE TVIECDDKSQPLTQWWIS EEEEECCCCCCHHHHCCC >Mature Secondary Structure MNTRLFFNSESIDIDDGYFLRLALSNSGYLDLLSAVPPAADVIGTISSIYEELQEPLKYI CCCEEEECCCCEECCCCEEEEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH CDLLLFGKTVCMEKLPEALVESILKIRESGLIALRGNAVSLNNLYLQLVDGLLYFSELPH HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCEEEHHHHHHHHHHHHHHHHHCCC GRQTLYYGTDSYALACRLGTAPSRNNVLDYCAGPGIQGLLSASHGAHVTAVEVNPLASEL CCEEEEECCCCEEEEEEECCCCCCCCEEHHHCCCCHHHHHHCCCCCEEEEEECCCHHHHH SLCNARLNKLDNLFNVINKSVIESETDLKNLRFDFICANPPLLPIPFNLNYPFVGDGGTD HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCEEEEEECCCCEEEEEECCCCCEECCCCCH GLSIFRQIMNYGIPHLSRNGKIVTLGLSGGSEVGPDIYCLAEQLQMKYQMKFILIILSRV HHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC EITPRSLWIQYMADTINMYSLGENTVSCNEVFESYQNEDISFVYSYTLSAINNKCYGRDF CCCHHHHHHHHHHHHHHHEECCCCCEEHHHHHHHHCCCCCEEEHHHHHHHHCCCCCCCCE TVIECDDKSQPLTQWWIS EEEEECCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA