| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is yeaZ [C]
Identifier: 213691905
GI number: 213691905
Start: 1204346
End: 1205164
Strand: Direct
Name: yeaZ [C]
Synonym: Blon_1017
Alternate gene names: 213691905
Gene position: 1204346-1205164 (Clockwise)
Preceding gene: 213691904
Following gene: 213691906
Centisome position: 42.52
GC content: 57.51
Gene sequence:
>819_bases ATGGGTTGCACGTTGGTGATTGACACCTCATTCGGCTCGACGGTCGGCATTGTGGGGCGCGAGCCCATTGTAGAGACCGA TTCGCGCACCCATGTGGAGAAGCTGCAGGTCAATATCGCGCGTGCGGTCGAAGAAGCCGGGTTCCCAGCATCTGACATTG CAACAGTCATTGTGGGTACCGGTCCAGCCCCCTTTACTGGTCTGCGTGCCGGTATCGTTACGGCCAAGGCACTGGCTTTC GCAACGGGAGCGACGCTTATCGGCCATAATGTTCTTGAGTCTCAGGTGCAATGGAATCTCATTCGCCGTGGCAAAGCCGG CACTCTCGACGATACTCATAAATGCCATGTGCTCACTCTTGCCGTAAACGACGCACGCCGCAAGCAACTCTATTTTGCGT TGTACTCGGACCCGCTCGTTGGCGATCCCAATGGCGAAACCGTGGCGACGGCTCTGATTGACATGGACATCGATTACCCT GCATCCATCGCGCAGCGCGTGAATGATGCCGTTCATACGTACCGCGACGGACTTATGCCAGAAGACAGCAATGTGGATGT GGTCGTGGATGTTGTGGGTCATGGGGCCCGCAAATATGCGGATGCGCTGGGTGCAATCGAGCAGCTTGGCGACATCACCG ATGAATCCGTATTGGACCAAGGGGAGCAAGGTCTCGCTATCTTTGCCACTGATGCGGAACTGGTTGCCAACCGTAATCCC GATACGCCGGTCGAACCGTTGTACCTGCGCCGTCCGGACGCCGAAGTGCCGAATCCGCTGAAGCACGTGCTCGGCCATGC CGGTGCCGATAAGGCGTGA
Upstream 100 bases:
>100_bases CCAGTCGGCAAGCGATGGGCCGCGTTCGATCTGCAGTAAGCCATGCGCCTATAGACTCCTCGATGTACACTCTCTAGAGG CTTTACGACTAGGAGGATTC
Downstream 100 bases:
>100_bases AGTGGGTTGTGGTCCGATGATTGTTGACATCACTGCCGTAAGTCGTGATCTTGCGGTTTGCTCCATCGCACAGTTGGAAG GCGAACTGTTCGGCCTCGGC
Product: peptidase M22, glycoprotease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 272; Mature: 271
Protein sequence:
>272_residues MGCTLVIDTSFGSTVGIVGREPIVETDSRTHVEKLQVNIARAVEEAGFPASDIATVIVGTGPAPFTGLRAGIVTAKALAF ATGATLIGHNVLESQVQWNLIRRGKAGTLDDTHKCHVLTLAVNDARRKQLYFALYSDPLVGDPNGETVATALIDMDIDYP ASIAQRVNDAVHTYRDGLMPEDSNVDVVVDVVGHGARKYADALGAIEQLGDITDESVLDQGEQGLAIFATDAELVANRNP DTPVEPLYLRRPDAEVPNPLKHVLGHAGADKA
Sequences:
>Translated_272_residues MGCTLVIDTSFGSTVGIVGREPIVETDSRTHVEKLQVNIARAVEEAGFPASDIATVIVGTGPAPFTGLRAGIVTAKALAF ATGATLIGHNVLESQVQWNLIRRGKAGTLDDTHKCHVLTLAVNDARRKQLYFALYSDPLVGDPNGETVATALIDMDIDYP ASIAQRVNDAVHTYRDGLMPEDSNVDVVVDVVGHGARKYADALGAIEQLGDITDESVLDQGEQGLAIFATDAELVANRNP DTPVEPLYLRRPDAEVPNPLKHVLGHAGADKA >Mature_271_residues GCTLVIDTSFGSTVGIVGREPIVETDSRTHVEKLQVNIARAVEEAGFPASDIATVIVGTGPAPFTGLRAGIVTAKALAFA TGATLIGHNVLESQVQWNLIRRGKAGTLDDTHKCHVLTLAVNDARRKQLYFALYSDPLVGDPNGETVATALIDMDIDYPA SIAQRVNDAVHTYRDGLMPEDSNVDVVVDVVGHGARKYADALGAIEQLGDITDESVLDQGEQGLAIFATDAELVANRNPD TPVEPLYLRRPDAEVPNPLKHVLGHAGADKA
Specific function: Unknown
COG id: COG1214
COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To M.leprae ML0378 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022496 - InterPro: IPR000905 [H]
Pfam domain/function: PF00814 Peptidase_M22 [H]
EC number: NA
Molecular weight: Translated: 28880; Mature: 28749
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGCTLVIDTSFGSTVGIVGREPIVETDSRTHVEKLQVNIARAVEEAGFPASDIATVIVGT CCEEEEEECCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHEEEEEEEC GPAPFTGLRAGIVTAKALAFATGATLIGHNVLESQVQWNLIRRGKAGTLDDTHKCHVLTL CCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEE AVNDARRKQLYFALYSDPLVGDPNGETVATALIDMDIDYPASIAQRVNDAVHTYRDGLMP EECCCCCCEEEEEEECCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCC EDSNVDVVVDVVGHGARKYADALGAIEQLGDITDESVLDQGEQGLAIFATDAELVANRNP CCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHCCCCCCEEEEEECHHHHHCCCC DTPVEPLYLRRPDAEVPNPLKHVLGHAGADKA CCCCCCEEEECCCCCCCCHHHHHHCCCCCCCC >Mature Secondary Structure GCTLVIDTSFGSTVGIVGREPIVETDSRTHVEKLQVNIARAVEEAGFPASDIATVIVGT CEEEEEECCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHEEEEEEEC GPAPFTGLRAGIVTAKALAFATGATLIGHNVLESQVQWNLIRRGKAGTLDDTHKCHVLTL CCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEE AVNDARRKQLYFALYSDPLVGDPNGETVATALIDMDIDYPASIAQRVNDAVHTYRDGLMP EECCCCCCEEEEEEECCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCC EDSNVDVVVDVVGHGARKYADALGAIEQLGDITDESVLDQGEQGLAIFATDAELVANRNP CCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHCCCCCCEEEEEECHHHHHCCCC DTPVEPLYLRRPDAEVPNPLKHVLGHAGADKA CCCCCCEEEECCCCCCCCHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]