| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is yjeE [C]
Identifier: 213691904
GI number: 213691904
Start: 1203718
End: 1204284
Strand: Direct
Name: yjeE [C]
Synonym: Blon_1016
Alternate gene names: 213691904
Gene position: 1203718-1204284 (Clockwise)
Preceding gene: 213691903
Following gene: 213691905
Centisome position: 42.49
GC content: 61.38
Gene sequence:
>567_bases ATGAGCGAACACACTATTGCGGCTCCCACCAGCGAGGCCATGCAGGAGCTCGGCCGTCGTGTGGCCGGAATGGTACACGG CGGCGATGTATTGCTGCTCTCAGGCCCTCTTGGTGCCGGCAAAACCACATTCGCCCAGGGCTTCGGGGCGGGGCTGGGCA TTACCGAACCCATCGTGTCTCCTACATTCACCATTGCCCGCGAACTCGACGGGCATTTCGCCGACGGCACTCCGTCTCAT CTGGTGCATGTGGATGCCTACCGTCTGGGCGGCTCAGCCTATGCGCCGGGGCAGGACGCCATCGGGCGTTTGTTGGACGA GCTGGAATCGCTGGGATTGGACGAAGAACTTGAAGACCCCGGCGAGAACACGGTGGTGCTTATGGAGTGGGGCGAACAAA TGGCCACCGCCTTGGCGCCAGAACGACTTGAAATCCATATCGATCGACCTCTCGATTCCTCCGATGCCGCATCCGCTGGA TCAGACGGCGAACTCACCAGCAACGGCACTCGTACCGTCGCATTCGTCCCAGTCGGCAAGCGATGGGCCGCGTTCGATCT GCAGTAA
Upstream 100 bases:
>100_bases AGCAAAGCAAAACAAACGGTGGCGACCCGGTATATGCGCTGGAACGCTGCATTGAAGACATCAGTCATAAAGGTCGGTAA AAGTCGATAAAGGAGTATTT
Downstream 100 bases:
>100_bases GCCATGCGCCTATAGACTCCTCGATGTACACTCTCTAGAGGCTTTACGACTAGGAGGATTCATGGGTTGCACGTTGGTGA TTGACACCTCATTCGGCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 188; Mature: 187
Protein sequence:
>188_residues MSEHTIAAPTSEAMQELGRRVAGMVHGGDVLLLSGPLGAGKTTFAQGFGAGLGITEPIVSPTFTIARELDGHFADGTPSH LVHVDAYRLGGSAYAPGQDAIGRLLDELESLGLDEELEDPGENTVVLMEWGEQMATALAPERLEIHIDRPLDSSDAASAG SDGELTSNGTRTVAFVPVGKRWAAFDLQ
Sequences:
>Translated_188_residues MSEHTIAAPTSEAMQELGRRVAGMVHGGDVLLLSGPLGAGKTTFAQGFGAGLGITEPIVSPTFTIARELDGHFADGTPSH LVHVDAYRLGGSAYAPGQDAIGRLLDELESLGLDEELEDPGENTVVLMEWGEQMATALAPERLEIHIDRPLDSSDAASAG SDGELTSNGTRTVAFVPVGKRWAAFDLQ >Mature_187_residues SEHTIAAPTSEAMQELGRRVAGMVHGGDVLLLSGPLGAGKTTFAQGFGAGLGITEPIVSPTFTIARELDGHFADGTPSHL VHVDAYRLGGSAYAPGQDAIGRLLDELESLGLDEELEDPGENTVVLMEWGEQMATALAPERLEIHIDRPLDSSDAASAGS DGELTSNGTRTVAFVPVGKRWAAFDLQ
Specific function: Unknown
COG id: COG0802
COG function: function code R; Predicted ATPase or kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0079 family [H]
Homologues:
Organism=Escherichia coli, GI1790610, Length=167, Percent_Identity=32.3353293413174, Blast_Score=71, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003442 [H]
Pfam domain/function: PF02367 UPF0079 [H]
EC number: NA
Molecular weight: Translated: 19694; Mature: 19563
Theoretical pI: Translated: 4.18; Mature: 4.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEHTIAAPTSEAMQELGRRVAGMVHGGDVLLLSGPLGAGKTTFAQGFGAGLGITEPIVS CCCCCCCCCCHHHHHHHHHHHHCEECCCCEEEEECCCCCCCHHHHHHCCCCCCCCCCCCC PTFTIARELDGHFADGTPSHLVHVDAYRLGGSAYAPGQDAIGRLLDELESLGLDEELEDP CHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCHHCCC GENTVVLMEWGEQMATALAPERLEIHIDRPLDSSDAASAGSDGELTSNGTRTVAFVPVGK CCCEEEEEECCHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCC RWAAFDLQ CEEEECCC >Mature Secondary Structure SEHTIAAPTSEAMQELGRRVAGMVHGGDVLLLSGPLGAGKTTFAQGFGAGLGITEPIVS CCCCCCCCCHHHHHHHHHHHHCEECCCCEEEEECCCCCCCHHHHHHCCCCCCCCCCCCC PTFTIARELDGHFADGTPSHLVHVDAYRLGGSAYAPGQDAIGRLLDELESLGLDEELEDP CHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCHHCCC GENTVVLMEWGEQMATALAPERLEIHIDRPLDSSDAASAGSDGELTSNGTRTVAFVPVGK CCCEEEEEECCHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCC RWAAFDLQ CEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP [C]
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12000953 [H]