| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691895
Identifier: 213691895
GI number: 213691895
Start: 1192254
End: 1192658
Strand: Direct
Name: 213691895
Synonym: Blon_1007
Alternate gene names: NA
Gene position: 1192254-1192658 (Clockwise)
Preceding gene: 213691892
Following gene: 213691897
Centisome position: 42.09
GC content: 60.0
Gene sequence:
>405_bases ATGGCAGTCATCACACCGCAGATCAAGGAATTCATCGAGAACAACCTCGGCTGGATCACCACCGTCTCCAAGGACGGCGA ACTGGACCTCGGCCCGAAGATGTCTCTGTTCGTTCTGGACGACACGCACATCGCCTACCATGAGCGCACCGCCGGCCAGC ACTACGAGAACCTCAAGAACGGCTCTCCGTTGGTCATCGCCTTCGCCAACCTCGAGAAGAAGCAGGGCTACCGCTTCCGC GGCAACGTGGTGCTGCACGTTGACGACGACATCTACAACGAGCAGGTCAAGGTCGCCGAGGAAAAGGGCACCAAGAAGCC GGCCGTGATTCCGGTTCTCGAAGTCACCGAGATCCAGAACCTTGCCTCCGGCCCGACCGCCGGCAAGACCATCGCCAAGG ACTGA
Upstream 100 bases:
>100_bases GTGAGGATACTCACAGTGAGCGCCCGGGCCGGTCGCGTGCGAAACCGGTATTCTGGAAAGGAACAGACATGGTTCCGCAA CAATCTTGAAAGGATTCGAC
Downstream 100 bases:
>100_bases TTAGCTGACGTATTGGTGGCTTCCTCGTCAGAGGGAGCCACTTTTTCGCTTTTTAGTGCGCAGTACTAGGTGACGGCCTT GGGCGTCGGTGGTGGCGAAG
Product: pyridoxamine 5'-phosphate oxidase-related, FMN-binding
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MAVITPQIKEFIENNLGWITTVSKDGELDLGPKMSLFVLDDTHIAYHERTAGQHYENLKNGSPLVIAFANLEKKQGYRFR GNVVLHVDDDIYNEQVKVAEEKGTKKPAVIPVLEVTEIQNLASGPTAGKTIAKD
Sequences:
>Translated_134_residues MAVITPQIKEFIENNLGWITTVSKDGELDLGPKMSLFVLDDTHIAYHERTAGQHYENLKNGSPLVIAFANLEKKQGYRFR GNVVLHVDDDIYNEQVKVAEEKGTKKPAVIPVLEVTEIQNLASGPTAGKTIAKD >Mature_133_residues AVITPQIKEFIENNLGWITTVSKDGELDLGPKMSLFVLDDTHIAYHERTAGQHYENLKNGSPLVIAFANLEKKQGYRFRG NVVLHVDDDIYNEQVKVAEEKGTKKPAVIPVLEVTEIQNLASGPTAGKTIAKD
Specific function: Unknown
COG id: COG3576
COG function: function code R; Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14846; Mature: 14715
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVITPQIKEFIENNLGWITTVSKDGELDLGPKMSLFVLDDTHIAYHERTAGQHYENLKN CCEECHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEEECCEEEEECCCCCHHHHHHCC GSPLVIAFANLEKKQGYRFRGNVVLHVDDDIYNEQVKVAEEKGTKKPAVIPVLEVTEIQN CCCEEEEEECCCCCCCEEEECCEEEEECCCCCCCCEEEEHHCCCCCCCEEEEEEHHHHHH LASGPTAGKTIAKD HCCCCCCCCCCCCC >Mature Secondary Structure AVITPQIKEFIENNLGWITTVSKDGELDLGPKMSLFVLDDTHIAYHERTAGQHYENLKN CEECHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEEECCEEEEECCCCCHHHHHHCC GSPLVIAFANLEKKQGYRFRGNVVLHVDDDIYNEQVKVAEEKGTKKPAVIPVLEVTEIQN CCCEEEEEECCCCCCCEEEECCEEEEECCCCCCCCEEEEHHCCCCCCCEEEEEEHHHHHH LASGPTAGKTIAKD HCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA