| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691866
Identifier: 213691866
GI number: 213691866
Start: 1157972
End: 1158814
Strand: Direct
Name: 213691866
Synonym: Blon_0975
Alternate gene names: NA
Gene position: 1157972-1158814 (Clockwise)
Preceding gene: 213691865
Following gene: 213691867
Centisome position: 40.88
GC content: 63.35
Gene sequence:
>843_bases ATGGCCAATCCCGAGCTGTCACGGCACATCCAGGCCCTTCCCGACGAGCTGAACGCCCTTGAAGGGGGACGGGAGATTTC CGAACACCTGCGGAGGGTCGACGCGCTGAAGGACCGGGCCCGCTCGCTGGAGCCGTTGGACGGTGTCGAGGACATGGCGT TGGCGGATTACGACCGCGACTGGCTGGTGCGCTACACCTACAACTCGAACGCCATTGAGGGATCCACGCTGACCCTGGAG GACACGTCGCTGGTGTTGGAGGGCGAGTTCGTCCCATCGGACTCGCCGGCCAGATACGTGTTCGCAGCGCGAGGGGTCGC TGACGGCATGGCCTACGTGCGCGAATATGCCAAGGAGGGGCGGAAGCTGAACGAGGAGCTGATCCGTCGTCTACACGAGG TGACCGCATTGGATCTCCAGCCGTTCGCCCGCGGCACGTTCCGTCCTTATGGCTATTTGGCGCGGATCACCGCCACCCGA GTCAAGACCGCGGACCCGCTGGAGATCCGCGACGACCTGCGATCCTTGATCGACGGGTTGGATGGCTGCGCAGCGCATCC GCTGCTCAGGGCCGCCGGTTTCCACGCGATGTTCGAGAACATCCATCCATTCATGGACGGCAACGGGCGGACCGGCCGCC AGCTGCTCAACTTCGTGCTGCTGCGGAACGGATACCGTCCCGTGGCCATCAAATACGATGCGGGTCGGTCATATGCGCGA GGCCTGGAGGCATGGCAGGTGGACGGCAAGCCGGATTCGTTCTGCTCCATTTTCCTAGACTGCGTGGAACAGGAGGAACA GACGCTCGTCGATCTGATCGAGCGGCTTCGCCATCTGAGATAG
Upstream 100 bases:
>100_bases AACCGGACCGGATGCGTTGAGCCGTCATCTGAACCGCTAGCGCAACGAATCACTACTGGAATAATGGACTTTGCAACCGG AACACGAAAAGAGGAGCATG
Downstream 100 bases:
>100_bases GTCGCAGGAACACTCGCATGCTTCTTTCGTGTGCGTCGGTAAGCCGCTGATATGCACAGAAGAATGAGATTATTCTTGGG TGCCTGTAGGTGCCTCGTGG
Product: filamentation induced by cAMP protein Fic
Products: NA
Alternate protein names: Fic Family Protein; Fic Protein; Fic Protein Involved In; FIC Domain-Containing Protein; Filamentation Induced By Camp Protein Fic; Fic Family xin-Antitoxin System Toxin Component; Filamentation Induced By CAMP Protein Fic-Like Protein; Fic Family Protein xin-Antitoxin System; Fic/DOC Family Protein; Fic-Domain-Containing Protein
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MANPELSRHIQALPDELNALEGGREISEHLRRVDALKDRARSLEPLDGVEDMALADYDRDWLVRYTYNSNAIEGSTLTLE DTSLVLEGEFVPSDSPARYVFAARGVADGMAYVREYAKEGRKLNEELIRRLHEVTALDLQPFARGTFRPYGYLARITATR VKTADPLEIRDDLRSLIDGLDGCAAHPLLRAAGFHAMFENIHPFMDGNGRTGRQLLNFVLLRNGYRPVAIKYDAGRSYAR GLEAWQVDGKPDSFCSIFLDCVEQEEQTLVDLIERLRHLR
Sequences:
>Translated_280_residues MANPELSRHIQALPDELNALEGGREISEHLRRVDALKDRARSLEPLDGVEDMALADYDRDWLVRYTYNSNAIEGSTLTLE DTSLVLEGEFVPSDSPARYVFAARGVADGMAYVREYAKEGRKLNEELIRRLHEVTALDLQPFARGTFRPYGYLARITATR VKTADPLEIRDDLRSLIDGLDGCAAHPLLRAAGFHAMFENIHPFMDGNGRTGRQLLNFVLLRNGYRPVAIKYDAGRSYAR GLEAWQVDGKPDSFCSIFLDCVEQEEQTLVDLIERLRHLR >Mature_279_residues ANPELSRHIQALPDELNALEGGREISEHLRRVDALKDRARSLEPLDGVEDMALADYDRDWLVRYTYNSNAIEGSTLTLED TSLVLEGEFVPSDSPARYVFAARGVADGMAYVREYAKEGRKLNEELIRRLHEVTALDLQPFARGTFRPYGYLARITATRV KTADPLEIRDDLRSLIDGLDGCAAHPLLRAAGFHAMFENIHPFMDGNGRTGRQLLNFVLLRNGYRPVAIKYDAGRSYARG LEAWQVDGKPDSFCSIFLDCVEQEEQTLVDLIERLRHLR
Specific function: Unknown
COG id: COG3177
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI42794620, Length=220, Percent_Identity=30, Blast_Score=86, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17544594, Length=218, Percent_Identity=27.5229357798165, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI24582217, Length=244, Percent_Identity=27.0491803278689, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31709; Mature: 31578
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANPELSRHIQALPDELNALEGGREISEHLRRVDALKDRARSLEPLDGVEDMALADYDRD CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCC WLVRYTYNSNAIEGSTLTLEDTSLVLEGEFVPSDSPARYVFAARGVADGMAYVREYAKEG EEEEEEECCCCCCCCEEEEECCEEEEECCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHH RKLNEELIRRLHEVTALDLQPFARGTFRPYGYLARITATRVKTADPLEIRDDLRSLIDGL HHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH DGCAAHPLLRAAGFHAMFENIHPFMDGNGRTGRQLLNFVLLRNGYRPVAIKYDAGRSYAR CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHC GLEAWQVDGKPDSFCSIFLDCVEQEEQTLVDLIERLRHLR CCHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ANPELSRHIQALPDELNALEGGREISEHLRRVDALKDRARSLEPLDGVEDMALADYDRD CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCC WLVRYTYNSNAIEGSTLTLEDTSLVLEGEFVPSDSPARYVFAARGVADGMAYVREYAKEG EEEEEEECCCCCCCCEEEEECCEEEEECCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHH RKLNEELIRRLHEVTALDLQPFARGTFRPYGYLARITATRVKTADPLEIRDDLRSLIDGL HHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH DGCAAHPLLRAAGFHAMFENIHPFMDGNGRTGRQLLNFVLLRNGYRPVAIKYDAGRSYAR CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHC GLEAWQVDGKPDSFCSIFLDCVEQEEQTLVDLIERLRHLR CCHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA