| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691865
Identifier: 213691865
GI number: 213691865
Start: 1156598
End: 1157911
Strand: Direct
Name: 213691865
Synonym: Blon_0974
Alternate gene names: NA
Gene position: 1156598-1157911 (Clockwise)
Preceding gene: 213691862
Following gene: 213691866
Centisome position: 40.83
GC content: 62.94
Gene sequence:
>1314_bases ATGCCACGCAAGCTGATCATGTGCGGGGACCATCCGGTCCTTGCGTTCGAATACGATCCCGAGTCCGGTCGCGCGTGCTC CTCTGGCGAGGTCCTTGACCATGATCGTCTGCCCCTGGAATTCACCACGCACGGCAAGAGCGCGCTGTATGCCAAGAGGA TCGACGAATGGTGGAGGTCCCGCGCCATCCCCTCCACCCGCGACGGCATCCGCCGCGTGCTCGAATCGCTTGGCGCGGCA TCGACCGACGAACTGCTCGACAGGACCTACGGGCTGAGCCTGTCGGACCAGTACTGGGTCAGACACGAGGACGACCCGGC CGAATGGAAGGACGTCAACTTCTTCGACAATTCCTTCGACGAGGCGCTGGGCGAGATCCTGCTCACCTCGTACTCGTCGT CCCATGACATCAGCCTCAACGTCCCCGACGTGTCCACTGGCGGCGATCTTCCCAAACGCTGGACGATCGACAGGGCCACC GGCAGGAGACTGCTCGTCAAGTCGGGGCGTACTGGCCAGGAGCCGATGAACGAGGTCATCGCCTCGAGGCTCTGCATGCG ATTGGGCGTTCCGGCCGTCCGGTATTCCCTGGCACGCAACGGCAACCGTCTGGTCTGCCCGTGCGAGGACATGCTCACCA GCCATGAGGAGATGGTCTCCGCCTGGCAGGTGCTCCAATCCGCCAGAACCGTCAATGGACTCAACTCGCATGACCAGTGG ATCCATGCCGCCGTCGGCTTCGGAGCTGACGAGCGCGCCGTGCGCGACGCCGCGGACGACTGGCTCGTGGTCGATTATCT CATGCGCAACACCGACCGGCACTATAACAACTTCGGTCTGATCCGCGACATCGAGACCCTTGAGATCCGTCCGGCGCCGA TCTACGACACCGGCGCGAGTCTGTGGAGCGGCGAGCTCGATGTGGACGGCCGCGACTGGTTCGCCAAGCCGTTCTACACC GCGACCGGCAAGCCCTCGGCTTTGCGGCAGCTCAGACTGGTGGAGGATTGGAGCCGGTTCGACCTGGATGCTCTGTCGGA CTGGCCCGACGAGGCGGCGCACGAGTTGTCGCGCATGCGCATGTTCGCGCCCGAACGCCTCGACGCCATCCGGGTACAGT TGGTAAAGCGTATCGGGATGCTCCGCAGAATCAGCGAAGGTGAGGTCCTTCGTGTTTCTGACCCGATTCGCAATAAAACG GATTTGATGGACAGATTCGGCGAGACGTTGCGGAAGAACCTTGGACAACGGGACGGGGATGCCAGAAGCGTCGGAACCGG ACCGGATGCGTTGAGCCGTCATCTGAACCGCTAG
Upstream 100 bases:
>100_bases TGGCCCATATCCATGCATCGCGTCATGAAACGGGACGCCGTCTCGCGCGTAATTCGTGCCTGTAGAATCTTTAAAGACCA AGTTTGGAGGGAGCGGGATC
Downstream 100 bases:
>100_bases CGCAACGAATCACTACTGGAATAATGGACTTTGCAACCGGAACACGAAAAGAGGAGCATGATGGCCAATCCCGAGCTGTC ACGGCACATCCAGGCCCTTC
Product: HipA domain protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 437; Mature: 436
Protein sequence:
>437_residues MPRKLIMCGDHPVLAFEYDPESGRACSSGEVLDHDRLPLEFTTHGKSALYAKRIDEWWRSRAIPSTRDGIRRVLESLGAA STDELLDRTYGLSLSDQYWVRHEDDPAEWKDVNFFDNSFDEALGEILLTSYSSSHDISLNVPDVSTGGDLPKRWTIDRAT GRRLLVKSGRTGQEPMNEVIASRLCMRLGVPAVRYSLARNGNRLVCPCEDMLTSHEEMVSAWQVLQSARTVNGLNSHDQW IHAAVGFGADERAVRDAADDWLVVDYLMRNTDRHYNNFGLIRDIETLEIRPAPIYDTGASLWSGELDVDGRDWFAKPFYT ATGKPSALRQLRLVEDWSRFDLDALSDWPDEAAHELSRMRMFAPERLDAIRVQLVKRIGMLRRISEGEVLRVSDPIRNKT DLMDRFGETLRKNLGQRDGDARSVGTGPDALSRHLNR
Sequences:
>Translated_437_residues MPRKLIMCGDHPVLAFEYDPESGRACSSGEVLDHDRLPLEFTTHGKSALYAKRIDEWWRSRAIPSTRDGIRRVLESLGAA STDELLDRTYGLSLSDQYWVRHEDDPAEWKDVNFFDNSFDEALGEILLTSYSSSHDISLNVPDVSTGGDLPKRWTIDRAT GRRLLVKSGRTGQEPMNEVIASRLCMRLGVPAVRYSLARNGNRLVCPCEDMLTSHEEMVSAWQVLQSARTVNGLNSHDQW IHAAVGFGADERAVRDAADDWLVVDYLMRNTDRHYNNFGLIRDIETLEIRPAPIYDTGASLWSGELDVDGRDWFAKPFYT ATGKPSALRQLRLVEDWSRFDLDALSDWPDEAAHELSRMRMFAPERLDAIRVQLVKRIGMLRRISEGEVLRVSDPIRNKT DLMDRFGETLRKNLGQRDGDARSVGTGPDALSRHLNR >Mature_436_residues PRKLIMCGDHPVLAFEYDPESGRACSSGEVLDHDRLPLEFTTHGKSALYAKRIDEWWRSRAIPSTRDGIRRVLESLGAAS TDELLDRTYGLSLSDQYWVRHEDDPAEWKDVNFFDNSFDEALGEILLTSYSSSHDISLNVPDVSTGGDLPKRWTIDRATG RRLLVKSGRTGQEPMNEVIASRLCMRLGVPAVRYSLARNGNRLVCPCEDMLTSHEEMVSAWQVLQSARTVNGLNSHDQWI HAAVGFGADERAVRDAADDWLVVDYLMRNTDRHYNNFGLIRDIETLEIRPAPIYDTGASLWSGELDVDGRDWFAKPFYTA TGKPSALRQLRLVEDWSRFDLDALSDWPDEAAHELSRMRMFAPERLDAIRVQLVKRIGMLRRISEGEVLRVSDPIRNKTD LMDRFGETLRKNLGQRDGDARSVGTGPDALSRHLNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49631; Mature: 49500
Theoretical pI: Translated: 5.51; Mature: 5.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRKLIMCGDHPVLAFEYDPESGRACSSGEVLDHDRLPLEFTTHGKSALYAKRIDEWWRS CCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHH RAIPSTRDGIRRVLESLGAASTDELLDRTYGLSLSDQYWVRHEDDPAEWKDVNFFDNSFD CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCHHH EALGEILLTSYSSSHDISLNVPDVSTGGDLPKRWTIDRATGRRLLVKSGRTGQEPMNEVI HHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCEEEECCCCCEEEEECCCCCHHHHHHHH ASRLCMRLGVPAVRYSLARNGNRLVCPCEDMLTSHEEMVSAWQVLQSARTVNGLNSHDQW HHHHHHHHCCHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH IHAAVGFGADERAVRDAADDWLVVDYLMRNTDRHYNNFGLIRDIETLEIRPAPIYDTGAS HHHHHCCCCCHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCEECCCEEEECCCCCCCCCCC LWSGELDVDGRDWFAKPFYTATGKPSALRQLRLVEDWSRFDLDALSDWPDEAAHELSRMR CCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHH MFAPERLDAIRVQLVKRIGMLRRISEGEVLRVSDPIRNKTDLMDRFGETLRKNLGQRDGD HCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCC ARSVGTGPDALSRHLNR CCCCCCCHHHHHHHCCC >Mature Secondary Structure PRKLIMCGDHPVLAFEYDPESGRACSSGEVLDHDRLPLEFTTHGKSALYAKRIDEWWRS CCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHH RAIPSTRDGIRRVLESLGAASTDELLDRTYGLSLSDQYWVRHEDDPAEWKDVNFFDNSFD CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCHHH EALGEILLTSYSSSHDISLNVPDVSTGGDLPKRWTIDRATGRRLLVKSGRTGQEPMNEVI HHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCEEEECCCCCEEEEECCCCCHHHHHHHH ASRLCMRLGVPAVRYSLARNGNRLVCPCEDMLTSHEEMVSAWQVLQSARTVNGLNSHDQW HHHHHHHHCCHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH IHAAVGFGADERAVRDAADDWLVVDYLMRNTDRHYNNFGLIRDIETLEIRPAPIYDTGAS HHHHHCCCCCHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCEECCCEEEECCCCCCCCCCC LWSGELDVDGRDWFAKPFYTATGKPSALRQLRLVEDWSRFDLDALSDWPDEAAHELSRMR CCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHH MFAPERLDAIRVQLVKRIGMLRRISEGEVLRVSDPIRNKTDLMDRFGETLRKNLGQRDGD HCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCC ARSVGTGPDALSRHLNR CCCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA