| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691844
Identifier: 213691844
GI number: 213691844
Start: 1126553
End: 1127185
Strand: Reverse
Name: 213691844
Synonym: Blon_0953
Alternate gene names: NA
Gene position: 1127185-1126553 (Counterclockwise)
Preceding gene: 213691846
Following gene: 213691834
Centisome position: 39.79
GC content: 60.19
Gene sequence:
>633_bases ATGAAGAACGTATTATGTTTCGGCGACTCCAACACCTTCGGCACCGATCCCGCGGATCCCGGAACCAGGCACCCTCTCGA CGTGCGATGGCCGGGGCGTCTGGCCTCGCTGTTGGGGGATGGATGGCATGTCATCGAAGAGGGTATGAGCGGTCGCACCT CCGTGTTCGACAACCCTTTGGAGCCGCATCGTTCCGGTATGGAGGCACTTCCGATCGTATTGCAATCGCACTGTCCGCTC GATTACGCGATTGTGATGCTGGGTACCAATGACCTCAAAGAGATGTTCAATGCATCATCGCGCATCGTCGCGGCAGGCGC CGAAATGGTCGCACGCACGATTCGCGATTACGACTATGCGGGTTGCGGGCCGGCGCCGAGAATCCTTCTCGTCTCCCCCA TCCACATCAAACCCGGAGTTCCCTATGCCAGTTTCGCGCAGAGCGCCGTCGAACGCTCGCACGAACTGTCTCGCTGGTAC CGCAAGGCCGCCGAACGTAATGGGTGGCTGTTCCTCGACGCCGCGACGGTCGCCGAACCCAGCGATCTCGATAAACTGCA CATGAATCCGGAAGGCCACGCGAGACTCGCCGATGCAATCGCCGGGATACTGTTGGCGGACGCCGCCAGATAA
Upstream 100 bases:
>100_bases CCGTGTGCGCCCGGGCGGGCTACGGCAAACGTCGGGAACGCTTGGCGCCGATCGATGTATGATGTGTGCGTTGCTGCCCG TCTTCAAGAAGGATTCATCT
Downstream 100 bases:
>100_bases TGCAGGACCATCATACCGATCGTGAATAACGCCGGGGCCGGCACCCATATCATTGGGCGCCGGCCCCGGCGTATATCCGT TCGGTCGTCGAACCATCGGA
Product: lipolytic enzyme, G-D-S-L family
Products: NA
Alternate protein names: Arylesterase Protein; Lipolytic G-D-S-L; GDSL Family Lipase; GDSL-Family Lipase/Acylhydrolase; Hydrolase; Lipolytic Protein; Methylated-DNA-Protein-Cysteinemethyltransferase; Lipolytic G-D-S-L Family; GDSL-Like Lipase/Acylhydrolase; Lipolytic Protein G-D-S-L Family; Lysophospholipase-Like Protein
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MKNVLCFGDSNTFGTDPADPGTRHPLDVRWPGRLASLLGDGWHVIEEGMSGRTSVFDNPLEPHRSGMEALPIVLQSHCPL DYAIVMLGTNDLKEMFNASSRIVAAGAEMVARTIRDYDYAGCGPAPRILLVSPIHIKPGVPYASFAQSAVERSHELSRWY RKAAERNGWLFLDAATVAEPSDLDKLHMNPEGHARLADAIAGILLADAAR
Sequences:
>Translated_210_residues MKNVLCFGDSNTFGTDPADPGTRHPLDVRWPGRLASLLGDGWHVIEEGMSGRTSVFDNPLEPHRSGMEALPIVLQSHCPL DYAIVMLGTNDLKEMFNASSRIVAAGAEMVARTIRDYDYAGCGPAPRILLVSPIHIKPGVPYASFAQSAVERSHELSRWY RKAAERNGWLFLDAATVAEPSDLDKLHMNPEGHARLADAIAGILLADAAR >Mature_210_residues MKNVLCFGDSNTFGTDPADPGTRHPLDVRWPGRLASLLGDGWHVIEEGMSGRTSVFDNPLEPHRSGMEALPIVLQSHCPL DYAIVMLGTNDLKEMFNASSRIVAAGAEMVARTIRDYDYAGCGPAPRILLVSPIHIKPGVPYASFAQSAVERSHELSRWY RKAAERNGWLFLDAATVAEPSDLDKLHMNPEGHARLADAIAGILLADAAR
Specific function: Unknown
COG id: COG2755
COG function: function code E; Lysophospholipase L1 and related esterases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22871; Mature: 22871
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNVLCFGDSNTFGTDPADPGTRHPLDVRWPGRLASLLGDGWHVIEEGMSGRTSVFDNPL CCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHCCCCCCHHCCCCC EPHRSGMEALPIVLQSHCPLDYAIVMLGTNDLKEMFNASSRIVAAGAEMVARTIRDYDYA CHHHCCHHHHHHHHHCCCCCCEEEEEECCHHHHHHHCCCCCEEHHHHHHHHHHHHHCCCC GCGPAPRILLVSPIHIKPGVPYASFAQSAVERSHELSRWYRKAAERNGWLFLDAATVAEP CCCCCCEEEEEECEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC SDLDKLHMNPEGHARLADAIAGILLADAAR CCCHHEECCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKNVLCFGDSNTFGTDPADPGTRHPLDVRWPGRLASLLGDGWHVIEEGMSGRTSVFDNPL CCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHCCCCCCHHCCCCC EPHRSGMEALPIVLQSHCPLDYAIVMLGTNDLKEMFNASSRIVAAGAEMVARTIRDYDYA CHHHCCHHHHHHHHHCCCCCCEEEEEECCHHHHHHHCCCCCEEHHHHHHHHHHHHHCCCC GCGPAPRILLVSPIHIKPGVPYASFAQSAVERSHELSRWYRKAAERNGWLFLDAATVAEP CCCCCCEEEEEECEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC SDLDKLHMNPEGHARLADAIAGILLADAAR CCCHHEECCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA