| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is fic [H]
Identifier: 213691834
GI number: 213691834
Start: 1113610
End: 1114260
Strand: Reverse
Name: fic [H]
Synonym: Blon_0943
Alternate gene names: 213691834
Gene position: 1114260-1113610 (Counterclockwise)
Preceding gene: 213691844
Following gene: 213691831
Centisome position: 39.33
GC content: 60.83
Gene sequence:
>651_bases ATGCGTCTGCGCGCCGCCGCCGACCCTGCCGGAAAGGATCGTCTGGCTGCCGGCAGTCTGGATGATCATGCCACGGATCG CGCGGATGCGGTGTTCGCACGTACCGTATTGTTGGCGGAACGTCGATGGAATCCGTCTGGCGACTTGGATGAGTTGACCG CCATTCATAAGGGGCTGTTCGAAGGCGTGTTTGAGGATGCGGGCAAGTTGCGTACCTCAAACACCACACGCGAGGTGACG AACGACCGGGCTCGGGCCGCGAATCCTGAGGCGTTCTTCCCGGCTGGGCTCATTGAGACCGGCGCGCACAACATCGCGAT GGAGTTGGCGGACAAGCGCAACCTGCATGCGTTGGATCGCGACGTGTTCGTTCACGCGTTTGCTTCTATTTATGATGAGC TCGGTTATCTGCATCCGTTCCGTGGCGGCAATGCGATGGTGCTGCGTATATTCGGTTCACGCTTGGCACATGACGCCGGC TGGGATCTCGACTGGGGCTCAGTGACGCGCGAAGAGTATCGCTCCGCCAAGCACTCGGCATATCGGGGCGACACGTCTGC ACTGGAGACGATGTTCGACGCGATACTACGCCCGGCGAATCCGACGCGCGTGTTCTTGATCGCCGGCTGGAATCAGGGGC CTGCACACTGA
Upstream 100 bases:
>100_bases GATGACGCCGGGCGAGGCAACGATGCGCGCCGCGGTTGCCTACGAACGTGGCTTGGAGCCCGTGACCCATCTCATCGACG TGGCGGACGAGCAGACCGCC
Downstream 100 bases:
>100_bases TTGCGGGTGATTGCATCGGCCTTTGGCTGATTCCTACGCCGTGATATCCCCCAGATGATGCTGGGTGTATTCGTCGGCTC GGGCGTCGATCGAGTCGTAG
Product: filamentation induced by cAMP protein Fic
Products: NA
Alternate protein names: Cell filamentation protein fic [H]
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MRLRAAADPAGKDRLAAGSLDDHATDRADAVFARTVLLAERRWNPSGDLDELTAIHKGLFEGVFEDAGKLRTSNTTREVT NDRARAANPEAFFPAGLIETGAHNIAMELADKRNLHALDRDVFVHAFASIYDELGYLHPFRGGNAMVLRIFGSRLAHDAG WDLDWGSVTREEYRSAKHSAYRGDTSALETMFDAILRPANPTRVFLIAGWNQGPAH
Sequences:
>Translated_216_residues MRLRAAADPAGKDRLAAGSLDDHATDRADAVFARTVLLAERRWNPSGDLDELTAIHKGLFEGVFEDAGKLRTSNTTREVT NDRARAANPEAFFPAGLIETGAHNIAMELADKRNLHALDRDVFVHAFASIYDELGYLHPFRGGNAMVLRIFGSRLAHDAG WDLDWGSVTREEYRSAKHSAYRGDTSALETMFDAILRPANPTRVFLIAGWNQGPAH >Mature_216_residues MRLRAAADPAGKDRLAAGSLDDHATDRADAVFARTVLLAERRWNPSGDLDELTAIHKGLFEGVFEDAGKLRTSNTTREVT NDRARAANPEAFFPAGLIETGAHNIAMELADKRNLHALDRDVFVHAFASIYDELGYLHPFRGGNAMVLRIFGSRLAHDAG WDLDWGSVTREEYRSAKHSAYRGDTSALETMFDAILRPANPTRVFLIAGWNQGPAH
Specific function: Probable adenylyltransferase that mediates the addition of adenosine 5'-monophosphate (AMP) to specific residues of target proteins. Involved in cell filamentation induced by cyclic AMP. May have some role in cell division [H]
COG id: COG2184
COG function: function code D; Protein involved in cell division
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 fido domain [H]
Homologues:
Organism=Escherichia coli, GI1789761, Length=154, Percent_Identity=30.5194805194805, Blast_Score=79, Evalue=3e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003812 [H]
Pfam domain/function: PF02661 Fic [H]
EC number: NA
Molecular weight: Translated: 23827; Mature: 23827
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLRAAADPAGKDRLAAGSLDDHATDRADAVFARTVLLAERRWNPSGDLDELTAIHKGLF CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH EGVFEDAGKLRTSNTTREVTNDRARAANPEAFFPAGLIETGAHNIAMELADKRNLHALDR HHHHHHHHCCCCCCCHHHHHCCHHHCCCCCCCCCCHHHHHCCHHHHHHHHCCCCCHHHHH DVFVHAFASIYDELGYLHPFRGGNAMVLRIFGSRLAHDAGWDLDWGSVTREEYRSAKHSA HHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHCCCCCCCCHHCCHHHHHHHHHHH YRGDTSALETMFDAILRPANPTRVFLIAGWNQGPAH HCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCC >Mature Secondary Structure MRLRAAADPAGKDRLAAGSLDDHATDRADAVFARTVLLAERRWNPSGDLDELTAIHKGLF CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH EGVFEDAGKLRTSNTTREVTNDRARAANPEAFFPAGLIETGAHNIAMELADKRNLHALDR HHHHHHHHCCCCCCCHHHHHCCHHHCCCCCCCCCCHHHHHCCHHHHHHHHCCCCCHHHHH DVFVHAFASIYDELGYLHPFRGGNAMVLRIFGSRLAHDAGWDLDWGSVTREEYRSAKHSA HHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHCCCCCCCCHHCCHHHHHHHHHHH YRGDTSALETMFDAILRPANPTRVFLIAGWNQGPAH HCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2546924; 2403545; 9278503; 7549107; 2007139 [H]