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The map label for this gene is ywaC [H]

Identifier: 213691831

GI number: 213691831

Start: 1110253

End: 1110984

Strand: Reverse

Name: ywaC [H]

Synonym: Blon_0940

Alternate gene names: 213691831

Gene position: 1110984-1110253 (Counterclockwise)

Preceding gene: 213691834

Following gene: 213691828

Centisome position: 39.22

GC content: 54.78

Gene sequence:

>732_bases
GTGATACTTGACCGACATAGCCGACTCAAAACCTCCGATCTGCAAGCCCGTCTCAAAGCGTTGGACCTTCCGGGAGGCAC
CTTTACTCCCGAACAGGTCGTTAAATTCGTTGACCTCATGCAGGTGTATGAAGGCGCGATGTACGAGATCAGCACCAAGC
TGGAGATTCTCGACGACGAGTTCCAGGTGCGGTTCAGCCATGACCCTATACATCATATGGAACGCCGTTTGAAGTCGGTG
AGTTCGATCATTGGCAAGCTGGAGCGCAAGGATCTGCCAATCAGTGTCAATTCGATTAAGGACAATCTGTTCGATGTGGC
CGGCATCCGCGTGATCTGTAATTACCGCGACGACGTGTATTCCGTGTCCAACTATCTGTCGTCGCAGTCCGATATTCAGG
TGCTGCGCGTCAAGGACTACATCAAGAACCCGAAACAGAACGGGTATCGTTCATTGCACGTAATCTACGCGGTGCCCGTG
TTTCTCTCCTCGGGCGCGCATTACACGCCGGTGGAGGTGCAGTTCCGTACCATCGCCATGGATTATTGGGCGTCGCTGGA
GCATGCGCTGCGCTACAAGACCGATTTGCCGGACAACAAGCTCAGCGAGCATTCACAGACACTGCTCGACTGCGCCCGTT
CGCTGCAGAACGTCGAAGTGCAAATGCAGAACATCCACCGCGACATCAACGGCGCGCCGCAAGTGGGTGAAGCGCCTAAG
ACCTCGGACTGA

Upstream 100 bases:

>100_bases
ACGTATGCCATTGGTTGTCACGATGTCAAATTATGGGTTCTTGGAAAGATTCCCCGCTAACATCCAGATTGGCTGGAATC
CACCGAGTATATTGGTGGAC

Downstream 100 bases:

>100_bases
GGTGCTATGGAATCGGCCTGCGGCCGATTCATTCACCGTTGCAGCCACTTCGGCAGCCTGGCCGGCGCTTGGGCCAGCAG
GGTGCCGAGGAAGATGAGGG

Product: RelA/SpoT domain protein

Products: NA

Alternate protein names: (p)ppGpp synthase ywaC; Small alarmone synthase 2; SAS 2 [H]

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MILDRHSRLKTSDLQARLKALDLPGGTFTPEQVVKFVDLMQVYEGAMYEISTKLEILDDEFQVRFSHDPIHHMERRLKSV
SSIIGKLERKDLPISVNSIKDNLFDVAGIRVICNYRDDVYSVSNYLSSQSDIQVLRVKDYIKNPKQNGYRSLHVIYAVPV
FLSSGAHYTPVEVQFRTIAMDYWASLEHALRYKTDLPDNKLSEHSQTLLDCARSLQNVEVQMQNIHRDINGAPQVGEAPK
TSD

Sequences:

>Translated_243_residues
MILDRHSRLKTSDLQARLKALDLPGGTFTPEQVVKFVDLMQVYEGAMYEISTKLEILDDEFQVRFSHDPIHHMERRLKSV
SSIIGKLERKDLPISVNSIKDNLFDVAGIRVICNYRDDVYSVSNYLSSQSDIQVLRVKDYIKNPKQNGYRSLHVIYAVPV
FLSSGAHYTPVEVQFRTIAMDYWASLEHALRYKTDLPDNKLSEHSQTLLDCARSLQNVEVQMQNIHRDINGAPQVGEAPK
TSD
>Mature_243_residues
MILDRHSRLKTSDLQARLKALDLPGGTFTPEQVVKFVDLMQVYEGAMYEISTKLEILDDEFQVRFSHDPIHHMERRLKSV
SSIIGKLERKDLPISVNSIKDNLFDVAGIRVICNYRDDVYSVSNYLSSQSDIQVLRVKDYIKNPKQNGYRSLHVIYAVPV
FLSSGAHYTPVEVQFRTIAMDYWASLEHALRYKTDLPDNKLSEHSQTLLDCARSLQNVEVQMQNIHRDINGAPQVGEAPK
TSD

Specific function: Functions as a (p)ppGpp synthase. In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. activities in respo

COG id: COG2357

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the relA/spoT family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007685 [H]

Pfam domain/function: PF04607 RelA_SpoT [H]

EC number: =2.7.6.5 [H]

Molecular weight: Translated: 27824; Mature: 27824

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILDRHSRLKTSDLQARLKALDLPGGTFTPEQVVKFVDLMQVYEGAMYEISTKLEILDDE
CCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHEEECCC
FQVRFSHDPIHHMERRLKSVSSIIGKLERKDLPISVNSIKDNLFDVAGIRVICNYRDDVY
EEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHCEEEEECCCHHHH
SVSNYLSSQSDIQVLRVKDYIKNPKQNGYRSLHVIYAVPVFLSSGAHYTPVEVQFRTIAM
HHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHH
DYWASLEHALRYKTDLPDNKLSEHSQTLLDCARSLQNVEVQMQNIHRDINGAPQVGEAPK
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
TSD
CCC
>Mature Secondary Structure
MILDRHSRLKTSDLQARLKALDLPGGTFTPEQVVKFVDLMQVYEGAMYEISTKLEILDDE
CCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHEEECCC
FQVRFSHDPIHHMERRLKSVSSIIGKLERKDLPISVNSIKDNLFDVAGIRVICNYRDDVY
EEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHCEEEEECCCHHHH
SVSNYLSSQSDIQVLRVKDYIKNPKQNGYRSLHVIYAVPVFLSSGAHYTPVEVQFRTIAM
HHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHH
DYWASLEHALRYKTDLPDNKLSEHSQTLLDCARSLQNVEVQMQNIHRDINGAPQVGEAPK
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
TSD
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]