| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691827
Identifier: 213691827
GI number: 213691827
Start: 1104977
End: 1107082
Strand: Reverse
Name: 213691827
Synonym: Blon_0935
Alternate gene names: NA
Gene position: 1107082-1104977 (Counterclockwise)
Preceding gene: 213691828
Following gene: 213691818
Centisome position: 39.08
GC content: 61.49
Gene sequence:
>2106_bases ATGGCAATCAGCGCGAAGGAACTACCACTCGGGAAAGTGTTCACCCCGGATTTCCGGTTCACAATCCCCTCATTCCAGCG GGCCTACATATGGAAGGCCGAGAACATCCTGCAACTGGTAAGCGACTTGGACGACGCCTGCAAGTCACCCGGTACCCCGT ACTTCCTCGGCTCGCTGATTCTGGTGCGCGAGGGCGACAACCGTTATGACGTGATCGACGGGCAGCAGCGGCTGGTATCC CTGTCGATCATCATCGCCGTGCTGCGCGATCTGGAGCGAGACCCGGACCTCATGCGCCAACTCGACGCGCTGCTGGTGGA GCCCGGCGACAAGCTGCGCGGCATCGTCACCGAGCCTCGCCTCACGTTGCGCGAGCGCGACGCGGCGTTCTTCCGCGAAC ACGTGCAGGAGGACAACCTCGAATCCGTGTTCGACATGAACGACGACGATCTGGCGACCGCTGCGCAACGCAACATCGTC GCCAACATCCGCAAGACGTACGACGAGATCTCCAATTGGTCGGCATCCGAACGCCAGCAATTCGCGCAGTATCTGGTCAA CGAGGTGACGCTCGTCATCGTGACCACCGACGATCTCGACGGCGCGCATCGCATCTTCGACGTGATGAACATGCGCGGCC TGCCGCTCACCCCGTCCGACGTGTTCAAGGCGCGCGCCACGGCCAGCCTGTCGACCGCCGAACTTGACGTGTACGCAGCC CGTTGGGATGACATCATTGACCCGATCGGCGACGATCCGCATGACTGTGAGGAATTCTTCGCCTATCTGCATCTCGTGCT CACGCACAAGCCGGCCACCGACAAGCTCATCGAGGATTTCCTGGCCGACGTGCTGCAACCGTACATCGACAAAGGCACAG TGCCCACGTTCATCAACCAAGTACTGGCACCCTATGCGATGGCATGGCGGATCATCGCGCGCCCCAGCGACACCATACTG CCCGCCGAGGTGCGTAGCCGGCTTGAGGGATTGGACGATTACCGCAGCCACGAGTGGAAGCCCGTGGCCATGTGGGCGTT GGTCAATTCGTATCGCGGGCTGGGCGACGCCGATTTGTCGCCGTTCGTGGTTCGTGCCTCGCGTACCGACAGAACCACGG CCACGCTGGAATCGTTGGGTGCCCATGACGAGCGTCGGCTGTTGGAAATTCTGACCGCATTGGAACAGGTGACGGGCATC CGTACGCTGAATCGCACTGGAGCGTTGGAGCGGCGCGGTTATGCGAACGCCGCCATCCGTGATCTTGACAAGGGCTATTT GGTCCAGCGCGTGAACGGGTTGCATGTCTCGGACGGCGACCGTGAAGGCGCATTGGTCCGTTTGCATGGCGAGATGCAGG GTGACGGCGATTTGGTCCGTCTGCTGCTGATTCGCGCCAACGAGCAGAAGGCCGGCATGCAGTTGGATCGACCACGCCGG TTCAGTGCGCTGCCGATTATGCCGTTAGATATCGAACGGTCGAAATCGTTTGCGGACTGGTCGCAGGATCAACATGATTT CTGGATGTACCGACTCGGCAATATGGCGCTGGTGCAGGGCCCTGAGGATCAGTTGGACAGGTTGAGTGAATATCCGGCAC GTCGCGACCGCATGCTGTTGCGCGCGGATTCACGTCGTTTCCCGCTGACCAATCAGTTGAAGGATTTCGCTGACTGCACA CCTGCCCTGCTGGAGGCGCGGCAGGAAGAGTCGGTCCGACTCATCGTGGAATACTGGGGCATCCGGTATGACAAGGACGC CCGTGATCTGACCAAGCAGAATGTCGATGAGTTGTCGAAGACCTCTCCACGGCCGTCTCATAGTTCGCGGCGCGTCACGA TCCGGCAGGTGATTGACGCTGGTCTGCTGGTGCCGGGCGAGCGTCTGGTGTGGGAGCGGCCGCGCAAGGGCGAGCGCTGG TTTGCCACGGTCACCGAAAACGGTCGTCTCCGTCTGGATGACGGCTCCGAATATCCAACTCCGACCGCCGCGGCCCGTGC CGCCGCCGGAGGACGTCGCGGCGGAGGTCTGGACGTGTGGAAGCGCACGCGCAACGGTCAGAAGCTCAGCGACATCTGGA AGCAGTTCCGTCTACAGGCGCAGTAG
Upstream 100 bases:
>100_bases GAGCCGGCGTGATGCGCCCGCCGCCGGGCGAACACTGGTAGGCTTGAGCACAGTCGGCACGTCGGCATACCGTCCAAAGG CCGGCGACGAAGGGATTGAC
Downstream 100 bases:
>100_bases GCTACGGTAGCCGGCACATCATTGGTGGCTCCCCTCCATGAGGGGAGCCACACGCTCATTTATTCCAGCGCCGCCACGAT TTCAGCCGGTGTTTTGCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 701; Mature: 700
Protein sequence:
>701_residues MAISAKELPLGKVFTPDFRFTIPSFQRAYIWKAENILQLVSDLDDACKSPGTPYFLGSLILVREGDNRYDVIDGQQRLVS LSIIIAVLRDLERDPDLMRQLDALLVEPGDKLRGIVTEPRLTLRERDAAFFREHVQEDNLESVFDMNDDDLATAAQRNIV ANIRKTYDEISNWSASERQQFAQYLVNEVTLVIVTTDDLDGAHRIFDVMNMRGLPLTPSDVFKARATASLSTAELDVYAA RWDDIIDPIGDDPHDCEEFFAYLHLVLTHKPATDKLIEDFLADVLQPYIDKGTVPTFINQVLAPYAMAWRIIARPSDTIL PAEVRSRLEGLDDYRSHEWKPVAMWALVNSYRGLGDADLSPFVVRASRTDRTTATLESLGAHDERRLLEILTALEQVTGI RTLNRTGALERRGYANAAIRDLDKGYLVQRVNGLHVSDGDREGALVRLHGEMQGDGDLVRLLLIRANEQKAGMQLDRPRR FSALPIMPLDIERSKSFADWSQDQHDFWMYRLGNMALVQGPEDQLDRLSEYPARRDRMLLRADSRRFPLTNQLKDFADCT PALLEARQEESVRLIVEYWGIRYDKDARDLTKQNVDELSKTSPRPSHSSRRVTIRQVIDAGLLVPGERLVWERPRKGERW FATVTENGRLRLDDGSEYPTPTAAARAAAGGRRGGGLDVWKRTRNGQKLSDIWKQFRLQAQ
Sequences:
>Translated_701_residues MAISAKELPLGKVFTPDFRFTIPSFQRAYIWKAENILQLVSDLDDACKSPGTPYFLGSLILVREGDNRYDVIDGQQRLVS LSIIIAVLRDLERDPDLMRQLDALLVEPGDKLRGIVTEPRLTLRERDAAFFREHVQEDNLESVFDMNDDDLATAAQRNIV ANIRKTYDEISNWSASERQQFAQYLVNEVTLVIVTTDDLDGAHRIFDVMNMRGLPLTPSDVFKARATASLSTAELDVYAA RWDDIIDPIGDDPHDCEEFFAYLHLVLTHKPATDKLIEDFLADVLQPYIDKGTVPTFINQVLAPYAMAWRIIARPSDTIL PAEVRSRLEGLDDYRSHEWKPVAMWALVNSYRGLGDADLSPFVVRASRTDRTTATLESLGAHDERRLLEILTALEQVTGI RTLNRTGALERRGYANAAIRDLDKGYLVQRVNGLHVSDGDREGALVRLHGEMQGDGDLVRLLLIRANEQKAGMQLDRPRR FSALPIMPLDIERSKSFADWSQDQHDFWMYRLGNMALVQGPEDQLDRLSEYPARRDRMLLRADSRRFPLTNQLKDFADCT PALLEARQEESVRLIVEYWGIRYDKDARDLTKQNVDELSKTSPRPSHSSRRVTIRQVIDAGLLVPGERLVWERPRKGERW FATVTENGRLRLDDGSEYPTPTAAARAAAGGRRGGGLDVWKRTRNGQKLSDIWKQFRLQAQ >Mature_700_residues AISAKELPLGKVFTPDFRFTIPSFQRAYIWKAENILQLVSDLDDACKSPGTPYFLGSLILVREGDNRYDVIDGQQRLVSL SIIIAVLRDLERDPDLMRQLDALLVEPGDKLRGIVTEPRLTLRERDAAFFREHVQEDNLESVFDMNDDDLATAAQRNIVA NIRKTYDEISNWSASERQQFAQYLVNEVTLVIVTTDDLDGAHRIFDVMNMRGLPLTPSDVFKARATASLSTAELDVYAAR WDDIIDPIGDDPHDCEEFFAYLHLVLTHKPATDKLIEDFLADVLQPYIDKGTVPTFINQVLAPYAMAWRIIARPSDTILP AEVRSRLEGLDDYRSHEWKPVAMWALVNSYRGLGDADLSPFVVRASRTDRTTATLESLGAHDERRLLEILTALEQVTGIR TLNRTGALERRGYANAAIRDLDKGYLVQRVNGLHVSDGDREGALVRLHGEMQGDGDLVRLLLIRANEQKAGMQLDRPRRF SALPIMPLDIERSKSFADWSQDQHDFWMYRLGNMALVQGPEDQLDRLSEYPARRDRMLLRADSRRFPLTNQLKDFADCTP ALLEARQEESVRLIVEYWGIRYDKDARDLTKQNVDELSKTSPRPSHSSRRVTIRQVIDAGLLVPGERLVWERPRKGERWF ATVTENGRLRLDDGSEYPTPTAAARAAAGGRRGGGLDVWKRTRNGQKLSDIWKQFRLQAQ
Specific function: Unknown
COG id: COG1479
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 79795; Mature: 79664
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAISAKELPLGKVFTPDFRFTIPSFQRAYIWKAENILQLVSDLDDACKSPGTPYFLGSLI CCCCCCCCCCCCEECCCCEEECCCCCHHHHCCHHHHHHHHHHHHHHHCCCCCCEEECEEE LVREGDNRYDVIDGQQRLVSLSIIIAVLRDLERDPDLMRQLDALLVEPGDKLRGIVTEPR EEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHCCEECCCC LTLRERDAAFFREHVQEDNLESVFDMNDDDLATAAQRNIVANIRKTYDEISNWSASERQQ HHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH FAQYLVNEVTLVIVTTDDLDGAHRIFDVMNMRGLPLTPSDVFKARATASLSTAELDVYAA HHHHHHCCEEEEEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHEEEHH RWDDIIDPIGDDPHDCEEFFAYLHLVLTHKPATDKLIEDFLADVLQPYIDKGTVPTFINQ HHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH VLAPYAMAWRIIARPSDTILPAEVRSRLEGLDDYRSHEWKPVAMWALVNSYRGLGDADLS HHHHHHHHHHHEECCCCCCCCHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHCCCCCCCCC PFVVRASRTDRTTATLESLGAHDERRLLEILTALEQVTGIRTLNRTGALERRGYANAAIR CEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHH DLDKGYLVQRVNGLHVSDGDREGALVRLHGEMQGDGDLVRLLLIRANEQKAGMQLDRPRR HHHHHHHHHHCCCCEECCCCCCCCEEEEECCCCCCHHEEEEEHEECCCHHCCCCCCCCCC FSALPIMPLDIERSKSFADWSQDQHDFWMYRLGNMALVQGPEDQLDRLSEYPARRDRMLL CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHEECCEEEEECCHHHHHHHHHCCCHHHCEEE RADSRRFPLTNQLKDFADCTPALLEARQEESVRLIVEYWGIRYDKDARDLTKQNVDELSK EECCCCCCCHHHHHHHHCCCHHHHHHHCCCHHEEEEHHHCCCCCCCHHHHHHHHHHHHHH TSPRPSHSSRRVTIRQVIDAGLLVPGERLVWERPRKGERWFATVTENGRLRLDDGSEYPT CCCCCCCCCCCCHHHHHHHCCCCCCCCHHHCCCCCCCCCEEEEEECCCEEEECCCCCCCC PTAAARAAAGGRRGGGLDVWKRTRNGQKLSDIWKQFRLQAQ CHHHHHHHCCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCCC >Mature Secondary Structure AISAKELPLGKVFTPDFRFTIPSFQRAYIWKAENILQLVSDLDDACKSPGTPYFLGSLI CCCCCCCCCCCEECCCCEEECCCCCHHHHCCHHHHHHHHHHHHHHHCCCCCCEEECEEE LVREGDNRYDVIDGQQRLVSLSIIIAVLRDLERDPDLMRQLDALLVEPGDKLRGIVTEPR EEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHCCEECCCC LTLRERDAAFFREHVQEDNLESVFDMNDDDLATAAQRNIVANIRKTYDEISNWSASERQQ HHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH FAQYLVNEVTLVIVTTDDLDGAHRIFDVMNMRGLPLTPSDVFKARATASLSTAELDVYAA HHHHHHCCEEEEEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHEEEHH RWDDIIDPIGDDPHDCEEFFAYLHLVLTHKPATDKLIEDFLADVLQPYIDKGTVPTFINQ HHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH VLAPYAMAWRIIARPSDTILPAEVRSRLEGLDDYRSHEWKPVAMWALVNSYRGLGDADLS HHHHHHHHHHHEECCCCCCCCHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHCCCCCCCCC PFVVRASRTDRTTATLESLGAHDERRLLEILTALEQVTGIRTLNRTGALERRGYANAAIR CEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHH DLDKGYLVQRVNGLHVSDGDREGALVRLHGEMQGDGDLVRLLLIRANEQKAGMQLDRPRR HHHHHHHHHHCCCCEECCCCCCCCEEEEECCCCCCHHEEEEEHEECCCHHCCCCCCCCCC FSALPIMPLDIERSKSFADWSQDQHDFWMYRLGNMALVQGPEDQLDRLSEYPARRDRMLL CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHEECCEEEEECCHHHHHHHHHCCCHHHCEEE RADSRRFPLTNQLKDFADCTPALLEARQEESVRLIVEYWGIRYDKDARDLTKQNVDELSK EECCCCCCCHHHHHHHHCCCHHHHHHHCCCHHEEEEHHHCCCCCCCHHHHHHHHHHHHHH TSPRPSHSSRRVTIRQVIDAGLLVPGERLVWERPRKGERWFATVTENGRLRLDDGSEYPT CCCCCCCCCCCCHHHHHHHCCCCCCCCHHHCCCCCCCCCEEEEEECCCEEEECCCCCCCC PTAAARAAAGGRRGGGLDVWKRTRNGQKLSDIWKQFRLQAQ CHHHHHHHCCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA