| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691793
Identifier: 213691793
GI number: 213691793
Start: 1066567
End: 1067292
Strand: Reverse
Name: 213691793
Synonym: Blon_0901
Alternate gene names: NA
Gene position: 1067292-1066567 (Counterclockwise)
Preceding gene: 213691807
Following gene: 213691792
Centisome position: 37.68
GC content: 62.53
Gene sequence:
>726_bases ATGGCTCAGGTATGCGTGATTTTTGGTGCGGGCGAATACTATGCGGGCACGCCCGTGGTGCCGGCCGGCGCGTATGTGGT GGCGGCCGATGGCGGGCTCGACCATACGCGCGAGTTGGGCATCGTGCCCGATGTGGTGGTGGGCGATTTCGATTCGCTGG AGGGCCGGCCGCCTCGCACTGATGTGCGCACCATCGCGCTGCCCGCGTTGAAGGACGACCCGGACATGCTTTCCGCGCTG AAGGTCGGTTGGTCGGCGGGTTGCCGCGAATTCCATGTCTATGGCGGTTTGGGCGGCCGCATTGACCATACGATTTCCGG CATTCAACTGATGGCATTATTGGCCCGGCATGGGGCAAGCGGGTACCTGTATGGTGACGGGCTCATCGTCACGGCCATCA CCGATGGCAGGCTTTCGTTCCCCGCGCATCCAGTGCCCGAGGACGGCCGTATGGTGTCGGCGTTCTCCCACTCCGATGTT TCGCTTGGCGTGAACGAACCGGGGCTGAAATACGAGCTCAAGAACGGCACGCTGACCAATACGGTGGTGCAAGGCGTCAG CAACGAGTTCCGCGACGGCGTGGACGCGGCCATCAGCGTGGAACACGGCACACTGATCGTCACTTTCCCCATCGAGGTGG CATTGCCTCAGGTGAGCCGATTTCACGAATTTGGCGGCGATATCGGCGAGCTGGACACCGCAGTGTCCAAGCTGCTGGTT CGCTGA
Upstream 100 bases:
>100_bases CCCGCTTTCTTGATTTCTCAAGCCAAATAGGAATCCTACCACACGCCCGGACATTCGCGGCCCGTGTGTCGGTGGGTGGA TACCGGCTACAGTGGGCATC
Downstream 100 bases:
>100_bases CTCGTGTATCGTGCGCTTGCTCGTGATGATTCAAGACATTCCTCCAAAGGAGAGGAAAATCACATGCCGGTTGCGGGCAA TCCGAATTGTGAGCGCTCAC
Product: thiamine pyrophosphokinase
Products: NA
Alternate protein names: Thiamine Diphosphokinase; Thiamin Pyrophosphokinase
Number of amino acids: Translated: 241; Mature: 240
Protein sequence:
>241_residues MAQVCVIFGAGEYYAGTPVVPAGAYVVAADGGLDHTRELGIVPDVVVGDFDSLEGRPPRTDVRTIALPALKDDPDMLSAL KVGWSAGCREFHVYGGLGGRIDHTISGIQLMALLARHGASGYLYGDGLIVTAITDGRLSFPAHPVPEDGRMVSAFSHSDV SLGVNEPGLKYELKNGTLTNTVVQGVSNEFRDGVDAAISVEHGTLIVTFPIEVALPQVSRFHEFGGDIGELDTAVSKLLV R
Sequences:
>Translated_241_residues MAQVCVIFGAGEYYAGTPVVPAGAYVVAADGGLDHTRELGIVPDVVVGDFDSLEGRPPRTDVRTIALPALKDDPDMLSAL KVGWSAGCREFHVYGGLGGRIDHTISGIQLMALLARHGASGYLYGDGLIVTAITDGRLSFPAHPVPEDGRMVSAFSHSDV SLGVNEPGLKYELKNGTLTNTVVQGVSNEFRDGVDAAISVEHGTLIVTFPIEVALPQVSRFHEFGGDIGELDTAVSKLLV R >Mature_240_residues AQVCVIFGAGEYYAGTPVVPAGAYVVAADGGLDHTRELGIVPDVVVGDFDSLEGRPPRTDVRTIALPALKDDPDMLSALK VGWSAGCREFHVYGGLGGRIDHTISGIQLMALLARHGASGYLYGDGLIVTAITDGRLSFPAHPVPEDGRMVSAFSHSDVS LGVNEPGLKYELKNGTLTNTVVQGVSNEFRDGVDAAISVEHGTLIVTFPIEVALPQVSRFHEFGGDIGELDTAVSKLLVR
Specific function: Unknown
COG id: COG1564
COG function: function code H; Thiamine pyrophosphokinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25398; Mature: 25267
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQVCVIFGAGEYYAGTPVVPAGAYVVAADGGLDHTRELGIVPDVVVGDFDSLEGRPPRT CCEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCHHCCCCCCEEECCCHHCCCCCCCC DVRTIALPALKDDPDMLSALKVGWSAGCREFHVYGGLGGRIDHTISGIQLMALLARHGAS CCEEEEECCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCC GYLYGDGLIVTAITDGRLSFPAHPVPEDGRMVSAFSHSDVSLGVNEPGLKYELKNGTLTN CEEEECCEEEEEEECCEEECCCCCCCCCCCEEEEECCCCEEECCCCCCCEEEECCCCCHH TVVQGVSNEFRDGVDAAISVEHGTLIVTFPIEVALPQVSRFHEFGGDIGELDTAVSKLLV HHHHHHHHHHHCCCCEEEEEECCEEEEEEEHEEECHHHHHHHHHCCCHHHHHHHHHHHHC R C >Mature Secondary Structure AQVCVIFGAGEYYAGTPVVPAGAYVVAADGGLDHTRELGIVPDVVVGDFDSLEGRPPRT CEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCHHCCCCCCEEECCCHHCCCCCCCC DVRTIALPALKDDPDMLSALKVGWSAGCREFHVYGGLGGRIDHTISGIQLMALLARHGAS CCEEEEECCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCC GYLYGDGLIVTAITDGRLSFPAHPVPEDGRMVSAFSHSDVSLGVNEPGLKYELKNGTLTN CEEEECCEEEEEEECCEEECCCCCCCCCCCEEEEECCCCEEECCCCCCCEEEECCCCCHH TVVQGVSNEFRDGVDAAISVEHGTLIVTFPIEVALPQVSRFHEFGGDIGELDTAVSKLLV HHHHHHHHHHHCCCCEEEEEECCEEEEEEEHEEECHHHHHHHHHCCCHHHHHHHHHHHHC R C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA