| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is glcK [H]
Identifier: 213691771
GI number: 213691771
Start: 1038389
End: 1039303
Strand: Direct
Name: glcK [H]
Synonym: Blon_0879
Alternate gene names: 213691771
Gene position: 1038389-1039303 (Clockwise)
Preceding gene: 213691766
Following gene: 213691773
Centisome position: 36.66
GC content: 62.84
Gene sequence:
>915_bases ATGTCCGAAAACATTATGAACAATCTCAGAATCGGTGTTGACGTGGGCGGAACAAAAATCGAAGCTGTGCTGGTTGACGC AATGGGCACGGTATTGGGTTCCACCCGCATTCCCGCCAGACATGGCAACGATGCCGTGATCGAAGACATCGTCGCTGTGG CACATCAGGCGGCGGGTGAGCGTTTTGACGAGGTGAGCGCCATCGGCATCGGCACTCCTGGCACGGTGGATTCAGCCAGC GGGCATGTGGGCAATATCGTGAATCTCGACGTGGTCTCGCTGGACATGGGGCCGTTGGTCTCGCAGCGTTCGGGCGTGCA GGCCCATGTGGAAAACGACGTCAACGCCGCCGCCGTCGGTGCGGCCACCGTGTTGGGCGGTGCGGATGGCATGGCCGGTA CCATTGCGTTCCTGAACTTCGGCACCGGACTGGCTGCGGGCATTGTCCAAAACGGCGTGCTGATGCATGGCTATAGCGGT GCGGCCGGCGAAATCGGCCATATCCCAGTCGAACCTCATCGCCTCAAGTGCCCTTGCGGGCAATACGGATGCTTGGAAAC CGTCTGCTCGGGCGCATCCGTGGGGCGTCTGTGGCCCAACGCCGACCCGCCGATGCCCGACCTGATTCGTCGCGCGAAAA AGCGGGAGGCCGAGGCCGTCGATGTGCTGGACATGGTAGTGCGCGCCATCGGCGACACTATACAGATTCTGGCCCAATCC GTTGATCCGCGGCTGATTATCTTGGGCGGCGGCATGGCCAAGACCGGCGAACCGTTGGTCGAGGTGATCACGGCTGAGCT GCGCCGGCGCGAATCGCAATGCCGATTCCTCGAAACGCTGGACCTGCCGGCCCGGCTGCGTCTGGCACCCGTCGGCCAAC CGGTTGGAGCCATCGGTGCCGCCATGGCGGCGTAG
Upstream 100 bases:
>100_bases ATGTGAGTGTCGCCTTGGGTGAATTTGTTAAGATAGTTGTCAATAGTCGGATGCACACTTATACCAAGCGAAACGTTCGA TGAAGAACAGGGGAGGGCTG
Downstream 100 bases:
>100_bases CACTGGCATAGTGCCGGGGCATGGAAGATGAGGCGTCGGATTTGTCTCCGAGGCCCCATCTTCCACGCAGTCCTATATCG CTTTATATCGTGCTGTGCCG
Product: ROK family protein
Products: NA
Alternate protein names: Glucose kinase [H]
Number of amino acids: Translated: 304; Mature: 303
Protein sequence:
>304_residues MSENIMNNLRIGVDVGGTKIEAVLVDAMGTVLGSTRIPARHGNDAVIEDIVAVAHQAAGERFDEVSAIGIGTPGTVDSAS GHVGNIVNLDVVSLDMGPLVSQRSGVQAHVENDVNAAAVGAATVLGGADGMAGTIAFLNFGTGLAAGIVQNGVLMHGYSG AAGEIGHIPVEPHRLKCPCGQYGCLETVCSGASVGRLWPNADPPMPDLIRRAKKREAEAVDVLDMVVRAIGDTIQILAQS VDPRLIILGGGMAKTGEPLVEVITAELRRRESQCRFLETLDLPARLRLAPVGQPVGAIGAAMAA
Sequences:
>Translated_304_residues MSENIMNNLRIGVDVGGTKIEAVLVDAMGTVLGSTRIPARHGNDAVIEDIVAVAHQAAGERFDEVSAIGIGTPGTVDSAS GHVGNIVNLDVVSLDMGPLVSQRSGVQAHVENDVNAAAVGAATVLGGADGMAGTIAFLNFGTGLAAGIVQNGVLMHGYSG AAGEIGHIPVEPHRLKCPCGQYGCLETVCSGASVGRLWPNADPPMPDLIRRAKKREAEAVDVLDMVVRAIGDTIQILAQS VDPRLIILGGGMAKTGEPLVEVITAELRRRESQCRFLETLDLPARLRLAPVGQPVGAIGAAMAA >Mature_303_residues SENIMNNLRIGVDVGGTKIEAVLVDAMGTVLGSTRIPARHGNDAVIEDIVAVAHQAAGERFDEVSAIGIGTPGTVDSASG HVGNIVNLDVVSLDMGPLVSQRSGVQAHVENDVNAAAVGAATVLGGADGMAGTIAFLNFGTGLAAGIVQNGVLMHGYSGA AGEIGHIPVEPHRLKCPCGQYGCLETVCSGASVGRLWPNADPPMPDLIRRAKKREAEAVDVLDMVVRAIGDTIQILAQSV DPRLIILGGGMAKTGEPLVEVITAELRRRESQCRFLETLDLPARLRLAPVGQPVGAIGAAMAA
Specific function: Acts As A Repressor Of The Nagebacd Operon And Acts Both As An Activator And A Repressor For The Transcription Of The Glmsu Operon. [C]
COG id: COG1940
COG function: function code KG; Transcriptional regulator/sugar kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ROK (nagC/xylR) family [H]
Homologues:
Organism=Escherichia coli, GI1786891, Length=271, Percent_Identity=26.5682656826568, Blast_Score=95, Evalue=6e-21, Organism=Escherichia coli, GI87081733, Length=279, Percent_Identity=30.4659498207885, Blast_Score=91, Evalue=6e-20, Organism=Escherichia coli, GI1787878, Length=235, Percent_Identity=27.6595744680851, Blast_Score=88, Evalue=5e-19, Organism=Escherichia coli, GI1787363, Length=284, Percent_Identity=27.4647887323944, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1790522, Length=277, Percent_Identity=28.8808664259928, Blast_Score=76, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000600 - InterPro: IPR004654 [H]
Pfam domain/function: PF00480 ROK [H]
EC number: =2.7.1.2 [H]
Molecular weight: Translated: 31266; Mature: 31135
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSENIMNNLRIGVDVGGTKIEAVLVDAMGTVLGSTRIPARHGNDAVIEDIVAVAHQAAGE CCCCHHCCCEEEEECCCCEEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCC RFDEVSAIGIGTPGTVDSASGHVGNIVNLDVVSLDMGPLVSQRSGVQAHVENDVNAAAVG HHHHHEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCCHHCCCCCEEECCCCCCHHHHH AATVLGGADGMAGTIAFLNFGTGLAAGIVQNGVLMHGYSGAAGEIGHIPVEPHRLKCPCG HHHHCCCCCCCHHHHHEEECCCHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCEEECCCC QYGCLETVCSGASVGRLWPNADPPMPDLIRRAKKREAEAVDVLDMVVRAIGDTIQILAQS CCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC VDPRLIILGGGMAKTGEPLVEVITAELRRRESQCRFLETLDLPARLRLAPVGQPVGAIGA CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHH AMAA HHCC >Mature Secondary Structure SENIMNNLRIGVDVGGTKIEAVLVDAMGTVLGSTRIPARHGNDAVIEDIVAVAHQAAGE CCCHHCCCEEEEECCCCEEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCC RFDEVSAIGIGTPGTVDSASGHVGNIVNLDVVSLDMGPLVSQRSGVQAHVENDVNAAAVG HHHHHEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCCHHCCCCCEEECCCCCCHHHHH AATVLGGADGMAGTIAFLNFGTGLAAGIVQNGVLMHGYSGAAGEIGHIPVEPHRLKCPCG HHHHCCCCCCCHHHHHEEECCCHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCEEECCCC QYGCLETVCSGASVGRLWPNADPPMPDLIRRAKKREAEAVDVLDMVVRAIGDTIQILAQS CCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC VDPRLIILGGGMAKTGEPLVEVITAELRRRESQCRFLETLDLPARLRLAPVGQPVGAIGA CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHH AMAA HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]