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The map label for this gene is dppC [H]

Identifier: 213691764

GI number: 213691764

Start: 1028867

End: 1030048

Strand: Direct

Name: dppC [H]

Synonym: Blon_0872

Alternate gene names: 213691764

Gene position: 1028867-1030048 (Clockwise)

Preceding gene: 213691763

Following gene: 213691765

Centisome position: 36.32

GC content: 64.72

Gene sequence:

>1182_bases
GTGTCCAACGCATCCGCAAACAAAGTCACCGTGCCGGGCGACGAACGCCTGAACAAGCTCAACGTCAACGCCGGCGCGCC
GTTATGGTCCAAGATCCCGATCATCAAGGAGCTGCGCGTCGCGGTCGGATGGCAGAAAGCCATGCTGGTCACCGGCCTGT
CGCTGACCGCCTTCTTCCTGCTGGTGGCCGTCTTCGCGCCGCTGATCGCCCCCTACGGCCATGCGCAGATCAAGGACGCC
AACGGCGTCTCCTTCCCGGCGCAGGCCGCCCCCAGCGCCGAACACATCTGGGGCACCACCGCCGGTGGCTTCGACGTGTT
CTCCCGTGTGGTGTGGGGCGCGCGCACCGCCGTGATCGCCATCGTCGTGGCCGTGCTGCTTTCCATCTTCGCCGGCGTGA
TGCTGGGCCTGGTCTCGGGCTATTTCGGTGGCTGGGTGGACCGTGTGTTGGTGATGATCGCCGACGCCGTCTACTCCTTC
CCCTCGCTGTTGCTCGCCATTTTGATGGCCATCATGATCTCCCACGGGCAGTCCGGCCTGTGGAGCGGCATCCTGGCTTC
GGGCATTTCGATCACCGTGGTCTACGTTCCGCAGTACTTCCGTACGATTCGCGCCGAGGTGATCCGCATCAAGGAATCCG
CCTATGTGGAATCGGCCCGTGTGGTCGGCGCCTCCACCTGGCGGATCATGACCAAGCACCTGCTCAAGAACTCCACCCGC
ACGTTGCCGGTGATTCTGACGCTGAACTCGTCCGAAGCCATCCTGACCCTCGCCGGTCTGGGCTTCCTGGGCTTCGGCAT
CGAGCCGACGGCCGCGGCCGAATGGGGGTATGACCTGAACCGCTCCGTCTCCGACGTGACCGCCGGCATCTGGTGGACCG
CGGTGTTCCCGGGCATGGCCATCGTGCTGATCGTGCTTGGCATCACGCTGGTGGGCGAATCCCTCAACGACCTTGCCGAC
CCGCGCCTGCGCGCGCGCAAGTCCGCCGGCGAAGTGGTGGGATCCATCGAAGACACCTCCGTGGATCCCACCGAGAAACC
CTCCGTGCGCAATGAAGTGATCGCCGAATTGGATTCCAACGTCAATCCGCCGTCCACCGTCATCGATCACGACCCGGACT
TCACCGCATCCGAGTGGACCGGCGAAGGCACCGTCGCGCCGGCGACCAAGGGCAAGGAATGA

Upstream 100 bases:

>100_bases
GTGCAGGGCATCGTGATCCTGATCGCCGTCATCGTGGCCGTCGTCAACTTCGTCGTCGACGTGATCGCCGCGCTCATCGA
CCCGAGAGTGAGGTACTGAC

Downstream 100 bases:

>100_bases
GCATTATGAGTGAACAGCGTCAACATAATCTGGCCGACATCAAGGATCTGTCCGTCTCCTTCATGACCGATGCGGGCTCC
ATCAAAGCCGTAGAGAACGT

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 393; Mature: 392

Protein sequence:

>393_residues
MSNASANKVTVPGDERLNKLNVNAGAPLWSKIPIIKELRVAVGWQKAMLVTGLSLTAFFLLVAVFAPLIAPYGHAQIKDA
NGVSFPAQAAPSAEHIWGTTAGGFDVFSRVVWGARTAVIAIVVAVLLSIFAGVMLGLVSGYFGGWVDRVLVMIADAVYSF
PSLLLAILMAIMISHGQSGLWSGILASGISITVVYVPQYFRTIRAEVIRIKESAYVESARVVGASTWRIMTKHLLKNSTR
TLPVILTLNSSEAILTLAGLGFLGFGIEPTAAAEWGYDLNRSVSDVTAGIWWTAVFPGMAIVLIVLGITLVGESLNDLAD
PRLRARKSAGEVVGSIEDTSVDPTEKPSVRNEVIAELDSNVNPPSTVIDHDPDFTASEWTGEGTVAPATKGKE

Sequences:

>Translated_393_residues
MSNASANKVTVPGDERLNKLNVNAGAPLWSKIPIIKELRVAVGWQKAMLVTGLSLTAFFLLVAVFAPLIAPYGHAQIKDA
NGVSFPAQAAPSAEHIWGTTAGGFDVFSRVVWGARTAVIAIVVAVLLSIFAGVMLGLVSGYFGGWVDRVLVMIADAVYSF
PSLLLAILMAIMISHGQSGLWSGILASGISITVVYVPQYFRTIRAEVIRIKESAYVESARVVGASTWRIMTKHLLKNSTR
TLPVILTLNSSEAILTLAGLGFLGFGIEPTAAAEWGYDLNRSVSDVTAGIWWTAVFPGMAIVLIVLGITLVGESLNDLAD
PRLRARKSAGEVVGSIEDTSVDPTEKPSVRNEVIAELDSNVNPPSTVIDHDPDFTASEWTGEGTVAPATKGKE
>Mature_392_residues
SNASANKVTVPGDERLNKLNVNAGAPLWSKIPIIKELRVAVGWQKAMLVTGLSLTAFFLLVAVFAPLIAPYGHAQIKDAN
GVSFPAQAAPSAEHIWGTTAGGFDVFSRVVWGARTAVIAIVVAVLLSIFAGVMLGLVSGYFGGWVDRVLVMIADAVYSFP
SLLLAILMAIMISHGQSGLWSGILASGISITVVYVPQYFRTIRAEVIRIKESAYVESARVVGASTWRIMTKHLLKNSTRT
LPVILTLNSSEAILTLAGLGFLGFGIEPTAAAEWGYDLNRSVSDVTAGIWWTAVFPGMAIVLIVLGITLVGESLNDLADP
RLRARKSAGEVVGSIEDTSVDPTEKPSVRNEVIAELDSNVNPPSTVIDHDPDFTASEWTGEGTVAPATKGKE

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=303, Percent_Identity=32.013201320132, Blast_Score=160, Evalue=1e-40,
Organism=Escherichia coli, GI1787760, Length=280, Percent_Identity=35, Blast_Score=148, Evalue=7e-37,
Organism=Escherichia coli, GI1789964, Length=266, Percent_Identity=38.3458646616541, Blast_Score=139, Evalue=4e-34,
Organism=Escherichia coli, GI1789889, Length=255, Percent_Identity=30.5882352941176, Blast_Score=104, Evalue=1e-23,
Organism=Escherichia coli, GI1788505, Length=251, Percent_Identity=27.8884462151394, Blast_Score=90, Evalue=3e-19,
Organism=Escherichia coli, GI1787498, Length=267, Percent_Identity=28.4644194756554, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI1787549, Length=288, Percent_Identity=31.25, Blast_Score=85, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 41770; Mature: 41639

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNASANKVTVPGDERLNKLNVNAGAPLWSKIPIIKELRVAVGWQKAMLVTGLSLTAFFL
CCCCCCCEEECCCHHHHCEECCCCCCCHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHHH
LVAVFAPLIAPYGHAQIKDANGVSFPAQAAPSAEHIWGTTAGGFDVFSRVVWGARTAVIA
HHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHH
IVVAVLLSIFAGVMLGLVSGYFGGWVDRVLVMIADAVYSFPSLLLAILMAIMISHGQSGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
WSGILASGISITVVYVPQYFRTIRAEVIRIKESAYVESARVVGASTWRIMTKHLLKNSTR
HHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCC
TLPVILTLNSSEAILTLAGLGFLGFGIEPTAAAEWGYDLNRSVSDVTAGIWWTAVFPGMA
CEEEEEEECCCCCCHHHHHHHHHHCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
IVLIVLGITLVGESLNDLADPRLRARKSAGEVVGSIEDTSVDPTEKPSVRNEVIAELDSN
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCC
VNPPSTVIDHDPDFTASEWTGEGTVAPATKGKE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SNASANKVTVPGDERLNKLNVNAGAPLWSKIPIIKELRVAVGWQKAMLVTGLSLTAFFL
CCCCCCEEECCCHHHHCEECCCCCCCHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHHH
LVAVFAPLIAPYGHAQIKDANGVSFPAQAAPSAEHIWGTTAGGFDVFSRVVWGARTAVIA
HHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHH
IVVAVLLSIFAGVMLGLVSGYFGGWVDRVLVMIADAVYSFPSLLLAILMAIMISHGQSGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
WSGILASGISITVVYVPQYFRTIRAEVIRIKESAYVESARVVGASTWRIMTKHLLKNSTR
HHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCC
TLPVILTLNSSEAILTLAGLGFLGFGIEPTAAAEWGYDLNRSVSDVTAGIWWTAVFPGMA
CEEEEEEECCCCCCHHHHHHHHHHCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
IVLIVLGITLVGESLNDLADPRLRARKSAGEVVGSIEDTSVDPTEKPSVRNEVIAELDSN
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCC
VNPPSTVIDHDPDFTASEWTGEGTVAPATKGKE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]