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The map label for this gene is dppB [H]

Identifier: 213691763

GI number: 213691763

Start: 1027882

End: 1028865

Strand: Direct

Name: dppB [H]

Synonym: Blon_0871

Alternate gene names: 213691763

Gene position: 1027882-1028865 (Clockwise)

Preceding gene: 213691762

Following gene: 213691764

Centisome position: 36.29

GC content: 63.52

Gene sequence:

>984_bases
TTGATCATTCCCACCGTCTTCATTCTCGTCACCATCGTTTTCTTCGTGATGCGCGCCACCGGTGACCCGATCTCCGCCGC
GATGGGCGGACGGCTGACCCCCGAGGAGCTGCAGCGACGCATCCACGCCGCCGGTTACGACCGGCCTCTGATCGTGCAAT
ACGCCGATTATCTGGGTGACCTGCTGCATGGCGACCTCGGCACCACGCTGACCGACAACCAGCCGGTGAGCGCCATCCTC
GCCCACTATGGCGCCGCGACCTTTGAACTGGCCTTCCTCGCGCTGATCGTCGCGCTGATCGTCGGCATCGGTCTGGGGCG
TCTTGCCGCACGCCGGCGCGACCGCGCGGCTGATGCCGGCATCCGCACCTTCGCAATCCTGTGCTACGCCACGCCGGTCT
TCTTCCTTGGCCTGGTCCTGAAACTGATCTTCGCCATCTGGCTGAACGTGCTTCCCGCTTCCGGCCGATCGTCATTGGCG
TCCGAGATGCAGTTCTCGAGACTGATCTCGCCCACCGGCTTCTACATCATCGACGCCCTGCAGCTGGGCAACATGACCGT
GCTCGCCGACGTGCTGCGCCACGCCGTGCTTCCCGCGTTGGCGTTGGGCCTGCTGACCGCAGGCGTGTTCATCCGTCTGG
TGCGCACCAACGTGATCTCCACGTTCAACGCAGGCTATGTCGAGGCCGCCCGTTCTCGTGGCGTGAGCGAGAAGCGCCTG
TTGAACACGCATGCCTGGAAGCCGGCGCTGATTCCGATCATCACCGTCATGGGCATGCAGATCGCCCTGATGCTCGCCGG
CGCGGTGCTTACCGAAACGACCTTCGAGTGGAAAGGGCTGGGCTTCATGCTGTCCCAATATCTGAAAGCCCGTGACTTCG
TGGCCGTGCAGGGCATCGTGATCCTGATCGCCGTCATCGTGGCCGTCGTCAACTTCGTCGTCGACGTGATCGCCGCGCTC
ATCGACCCGAGAGTGAGGTACTGA

Upstream 100 bases:

>100_bases
AGCAGCTCCGGCCGCCGCACCTGATGCGGCGAAGCCGAAACAAGCCAAAAAGAACCGACTGTCGGGTGGATTCTTCCGTT
TCGTCCTCACTCGGTTCCTT

Downstream 100 bases:

>100_bases
CGTGTCCAACGCATCCGCAAACAAAGTCACCGTGCCGGGCGACGAACGCCTGAACAAGCTCAACGTCAACGCCGGCGCGC
CGTTATGGTCCAAGATCCCG

Product: binding-protein-dependent transport systems inner membrane component

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MIIPTVFILVTIVFFVMRATGDPISAAMGGRLTPEELQRRIHAAGYDRPLIVQYADYLGDLLHGDLGTTLTDNQPVSAIL
AHYGAATFELAFLALIVALIVGIGLGRLAARRRDRAADAGIRTFAILCYATPVFFLGLVLKLIFAIWLNVLPASGRSSLA
SEMQFSRLISPTGFYIIDALQLGNMTVLADVLRHAVLPALALGLLTAGVFIRLVRTNVISTFNAGYVEAARSRGVSEKRL
LNTHAWKPALIPIITVMGMQIALMLAGAVLTETTFEWKGLGFMLSQYLKARDFVAVQGIVILIAVIVAVVNFVVDVIAAL
IDPRVRY

Sequences:

>Translated_327_residues
MIIPTVFILVTIVFFVMRATGDPISAAMGGRLTPEELQRRIHAAGYDRPLIVQYADYLGDLLHGDLGTTLTDNQPVSAIL
AHYGAATFELAFLALIVALIVGIGLGRLAARRRDRAADAGIRTFAILCYATPVFFLGLVLKLIFAIWLNVLPASGRSSLA
SEMQFSRLISPTGFYIIDALQLGNMTVLADVLRHAVLPALALGLLTAGVFIRLVRTNVISTFNAGYVEAARSRGVSEKRL
LNTHAWKPALIPIITVMGMQIALMLAGAVLTETTFEWKGLGFMLSQYLKARDFVAVQGIVILIAVIVAVVNFVVDVIAAL
IDPRVRY
>Mature_327_residues
MIIPTVFILVTIVFFVMRATGDPISAAMGGRLTPEELQRRIHAAGYDRPLIVQYADYLGDLLHGDLGTTLTDNQPVSAIL
AHYGAATFELAFLALIVALIVGIGLGRLAARRRDRAADAGIRTFAILCYATPVFFLGLVLKLIFAIWLNVLPASGRSSLA
SEMQFSRLISPTGFYIIDALQLGNMTVLADVLRHAVLPALALGLLTAGVFIRLVRTNVISTFNAGYVEAARSRGVSEKRL
LNTHAWKPALIPIITVMGMQIALMLAGAVLTETTFEWKGLGFMLSQYLKARDFVAVQGIVILIAVIVAVVNFVVDVIAAL
IDPRVRY

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789965, Length=330, Percent_Identity=35.1515151515151, Blast_Score=207, Evalue=5e-55,
Organism=Escherichia coli, GI1787761, Length=322, Percent_Identity=37.2670807453416, Blast_Score=166, Evalue=2e-42,
Organism=Escherichia coli, GI1787053, Length=327, Percent_Identity=30.2752293577982, Blast_Score=163, Evalue=2e-41,
Organism=Escherichia coli, GI1789888, Length=332, Percent_Identity=30.1204819277108, Blast_Score=155, Evalue=4e-39,
Organism=Escherichia coli, GI1787550, Length=285, Percent_Identity=33.3333333333333, Blast_Score=152, Evalue=2e-38,
Organism=Escherichia coli, GI1787497, Length=328, Percent_Identity=29.5731707317073, Blast_Score=144, Evalue=5e-36,
Organism=Escherichia coli, GI1788504, Length=369, Percent_Identity=24.390243902439, Blast_Score=100, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 35435; Mature: 35435

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIPTVFILVTIVFFVMRATGDPISAAMGGRLTPEELQRRIHAAGYDRPLIVQYADYLGD
CCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHH
LLHGDLGTTLTDNQPVSAILAHYGAATFELAFLALIVALIVGIGLGRLAARRRDRAADAG
HHHCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRTFAILCYATPVFFLGLVLKLIFAIWLNVLPASGRSSLASEMQFSRLISPTGFYIIDAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHH
QLGNMTVLADVLRHAVLPALALGLLTAGVFIRLVRTNVISTFNAGYVEAARSRGVSEKRL
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHH
LNTHAWKPALIPIITVMGMQIALMLAGAVLTETTFEWKGLGFMLSQYLKARDFVAVQGIV
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ILIAVIVAVVNFVVDVIAALIDPRVRY
HHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MIIPTVFILVTIVFFVMRATGDPISAAMGGRLTPEELQRRIHAAGYDRPLIVQYADYLGD
CCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHH
LLHGDLGTTLTDNQPVSAILAHYGAATFELAFLALIVALIVGIGLGRLAARRRDRAADAG
HHHCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRTFAILCYATPVFFLGLVLKLIFAIWLNVLPASGRSSLASEMQFSRLISPTGFYIIDAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHH
QLGNMTVLADVLRHAVLPALALGLLTAGVFIRLVRTNVISTFNAGYVEAARSRGVSEKRL
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHH
LNTHAWKPALIPIITVMGMQIALMLAGAVLTETTFEWKGLGFMLSQYLKARDFVAVQGIV
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ILIAVIVAVVNFVVDVIAALIDPRVRY
HHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800; 8550458 [H]