| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is hisH [H]
Identifier: 213691722
GI number: 213691722
Start: 973624
End: 974271
Strand: Direct
Name: hisH [H]
Synonym: Blon_0827
Alternate gene names: 213691722
Gene position: 973624-974271 (Clockwise)
Preceding gene: 213691721
Following gene: 213691723
Centisome position: 34.37
GC content: 62.96
Gene sequence:
>648_bases ATGACCACAGCGGTTGTTTTCGATTACGGTTTCGGCAATGTACGTTCCATGGTGCGTGCGCTCGCCAATCTTGGCGTCGA CACCACTCTCACCTCCGATTATCGTCAGGCGCTGGAGGCCGACGGTCTGGTCGTGCCGGGCGTGGGCGCGTTCGCCGCAT GTATGGAGGGTCTGAAGAAGGTCGACGGCGACCGTGTGATCTATGATCGCATCCGCGCCGGCCGTCCGGTGCTTGGCGTG TGCGTGGGCGAGCAGATCATGTTCGAACACGGTCTGGAGCACGGGGTCCATGCCGCGGGCATCGGGCTGATCGGCGGTTC GGTGAACCTGCTGGACGCCGACGTGGTGCCTCACATGGGATGGGACACGATCGAGGCCGCCCCCGATTCGGTGCTGCTCA ACGGCGTGGAGAACGAACGGTTCTACTTCGTGCACTCCTACGCCGCGATGGAAGTGAAGCCGGTGGATACGTCTCGTTTC GACATTGATCTGAGCGGTGCGCCCGAACGCGTGAGCTGGTGCTCGTACGGCCGGTCGCGTTTCGTGGCCGCCTATGAACA CGGCCCGCTGTCCGCCACGCAATTCCACCCGGAAAAGTCCGGAGACGCCGGTGCCCAGCTCCTCAAGAACTGGATCGCCA CACTGTAA
Upstream 100 bases:
>100_bases GGCGATGCAGATTCTCGCCAACCACACCAGACGCGGACGTGGCGGGCGCGGCTCCCGCATCGAATAGACGCCAACCAACC AGTAGGGGATAGGAGAGAAT
Downstream 100 bases:
>100_bases AAAGCATGAAGCTCCCTCTGACGAGAGAGCTCAAATCGTGTATATGTAACTGAAGAAAGGCTCTTCTTATGTCGTTGACT CTGCTGCCCGCCGTCGATGT
Product: imidazole glycerol phosphate synthase subunit HisH
Products: NA
Alternate protein names: IGP synthase glutamine amidotransferase subunit; IGP synthase subunit hisH; ImGP synthase subunit hisH; IGPS subunit hisH [H]
Number of amino acids: Translated: 215; Mature: 214
Protein sequence:
>215_residues MTTAVVFDYGFGNVRSMVRALANLGVDTTLTSDYRQALEADGLVVPGVGAFAACMEGLKKVDGDRVIYDRIRAGRPVLGV CVGEQIMFEHGLEHGVHAAGIGLIGGSVNLLDADVVPHMGWDTIEAAPDSVLLNGVENERFYFVHSYAAMEVKPVDTSRF DIDLSGAPERVSWCSYGRSRFVAAYEHGPLSATQFHPEKSGDAGAQLLKNWIATL
Sequences:
>Translated_215_residues MTTAVVFDYGFGNVRSMVRALANLGVDTTLTSDYRQALEADGLVVPGVGAFAACMEGLKKVDGDRVIYDRIRAGRPVLGV CVGEQIMFEHGLEHGVHAAGIGLIGGSVNLLDADVVPHMGWDTIEAAPDSVLLNGVENERFYFVHSYAAMEVKPVDTSRF DIDLSGAPERVSWCSYGRSRFVAAYEHGPLSATQFHPEKSGDAGAQLLKNWIATL >Mature_214_residues TTAVVFDYGFGNVRSMVRALANLGVDTTLTSDYRQALEADGLVVPGVGAFAACMEGLKKVDGDRVIYDRIRAGRPVLGVC VGEQIMFEHGLEHGVHAAGIGLIGGSVNLLDADVVPHMGWDTIEAAPDSVLLNGVENERFYFVHSYAAMEVKPVDTSRFD IDLSGAPERVSWCSYGRSRFVAAYEHGPLSATQFHPEKSGDAGAQLLKNWIATL
Specific function: IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The hisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to hisF for the synthesis of IGP and AICAR [H]
COG id: COG0118
COG function: function code E; Glutamine amidotransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788334, Length=221, Percent_Identity=34.3891402714932, Blast_Score=111, Evalue=3e-26, Organism=Saccharomyces cerevisiae, GI6319725, Length=217, Percent_Identity=29.9539170506912, Blast_Score=103, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR010139 - InterPro: IPR016226 [H]
Pfam domain/function: PF00117 GATase [H]
EC number: 2.4.2.-
Molecular weight: Translated: 23145; Mature: 23014
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTAVVFDYGFGNVRSMVRALANLGVDTTLTSDYRQALEADGLVVPGVGAFAACMEGLKK CCEEEEEECCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCEEECCHHHHHHHHHHHHH VDGDRVIYDRIRAGRPVLGVCVGEQIMFEHGLEHGVHAAGIGLIGGSVNLLDADVVPHMG CCCCCEEHHHHHCCCCEEEEHHHHHHHHHHCHHCCCHHHCEEEECCCCEEEECCCCCCCC WDTIEAAPDSVLLNGVENERFYFVHSYAAMEVKPVDTSRFDIDLSGAPERVSWCSYGRSR CCHHHCCCCCEEEECCCCCEEEEEEEEEEEEEEECCCCEEEEEECCCCCHHHHHHCCCHH FVAAYEHGPLSATQFHPEKSGDAGAQLLKNWIATL EEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure TTAVVFDYGFGNVRSMVRALANLGVDTTLTSDYRQALEADGLVVPGVGAFAACMEGLKK CEEEEEECCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCEEECCHHHHHHHHHHHHH VDGDRVIYDRIRAGRPVLGVCVGEQIMFEHGLEHGVHAAGIGLIGGSVNLLDADVVPHMG CCCCCEEHHHHHCCCCEEEEHHHHHHHHHHCHHCCCHHHCEEEECCCCEEEECCCCCCCC WDTIEAAPDSVLLNGVENERFYFVHSYAAMEVKPVDTSRFDIDLSGAPERVSWCSYGRSR CCHHHCCCCCEEEECCCCCEEEEEEEEEEEEEEECCCCEEEEEECCCCCHHHHHHCCCHH FVAAYEHGPLSATQFHPEKSGDAGAQLLKNWIATL EEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferases; Glycosyltransferases; Pentosyltransferases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12381787 [H]