| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
Click here to switch to the map view.
The map label for this gene is hisA [H]
Identifier: 213691723
GI number: 213691723
Start: 974340
End: 975065
Strand: Direct
Name: hisA [H]
Synonym: Blon_0828
Alternate gene names: 213691723
Gene position: 974340-975065 (Clockwise)
Preceding gene: 213691722
Following gene: 213691724
Centisome position: 34.4
GC content: 61.43
Gene sequence:
>726_bases ATGTCGTTGACTCTGCTGCCCGCCGTCGATGTACGCGATGGCAAGGCCGTGCGCCTACGCCAGGGTGAATCCGGTTCCGA AACCGATTACGGTTCGCCGTTCGAGGCCGCCCGTACTTGGGTTGAGGCCGGTGCCGAATGGATTCACCTGGTCGACCTTG ATGCCGCTTTTGGTACGGGCAACAATCGCGATCAGCTGCGAGAAATCGTTCACGAGCTTGGTGACCGCGTGAACATCGAA CTGTCCGGCGGCGTGCGCGATGACGCTTCGTTGGACGCGGCCCTTGAGGCCGGTGCCGCCCGAGTGAACATCGGCACCGC CGCTTTGGAGAATCCGGATTGGACCGCTTCGGTCATCAAGAAGTACGGCGACCGCGTGGCTGTTGGTCTGGATGTGCGCG GTCACACACTGGCGGCGCGCGGCTGGACACGCGAAGGCGGTGACCTGTTTGAGACCATGAAGTTCCTTGACTCCGTGGGC TGCTCGCGTTATGTGGTCACCGACGTGGCCAAGGACGGCATGATGTCCGGCCCGAACATCCAACTGCTGCGTGAAGTCGC CGAACGCACCGACGCCAAGGTCACGGCTTCCGGTGGTATCTCCAAGCTGGACGATTTGCGCGCCATCAAGGAACTGGCTG AAATTGGTGTTGATTCTGCCATCCTCGGCAAGTCCCTCTATGCACGTGCGTTCACGCTCCAGGAAGCGCTCGCAGTCGCG AAGTAG
Upstream 100 bases:
>100_bases AGCTCCTCAAGAACTGGATCGCCACACTGTAAAAAGCATGAAGCTCCCTCTGACGAGAGAGCTCAAATCGTGTATATGTA ACTGAAGAAAGGCTCTTCTT
Downstream 100 bases:
>100_bases GCAAAGGACTCGCCTTGGCGAGACTGTTAATCTGCCTTCGCTCAGCTATCGCTTCACTCAGGTCTCGCCTACGGACAGCC CACTGGGCTGTCCGCTTAAC
Product: phosphoribosyl isomerase A
Products: NA
Alternate protein names: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [H]
Number of amino acids: Translated: 241; Mature: 240
Protein sequence:
>241_residues MSLTLLPAVDVRDGKAVRLRQGESGSETDYGSPFEAARTWVEAGAEWIHLVDLDAAFGTGNNRDQLREIVHELGDRVNIE LSGGVRDDASLDAALEAGAARVNIGTAALENPDWTASVIKKYGDRVAVGLDVRGHTLAARGWTREGGDLFETMKFLDSVG CSRYVVTDVAKDGMMSGPNIQLLREVAERTDAKVTASGGISKLDDLRAIKELAEIGVDSAILGKSLYARAFTLQEALAVA K
Sequences:
>Translated_241_residues MSLTLLPAVDVRDGKAVRLRQGESGSETDYGSPFEAARTWVEAGAEWIHLVDLDAAFGTGNNRDQLREIVHELGDRVNIE LSGGVRDDASLDAALEAGAARVNIGTAALENPDWTASVIKKYGDRVAVGLDVRGHTLAARGWTREGGDLFETMKFLDSVG CSRYVVTDVAKDGMMSGPNIQLLREVAERTDAKVTASGGISKLDDLRAIKELAEIGVDSAILGKSLYARAFTLQEALAVA K >Mature_240_residues SLTLLPAVDVRDGKAVRLRQGESGSETDYGSPFEAARTWVEAGAEWIHLVDLDAAFGTGNNRDQLREIVHELGDRVNIEL SGGVRDDASLDAALEAGAARVNIGTAALENPDWTASVIKKYGDRVAVGLDVRGHTLAARGWTREGGDLFETMKFLDSVGC SRYVVTDVAKDGMMSGPNIQLLREVAERTDAKVTASGGISKLDDLRAIKELAEIGVDSAILGKSLYARAFTLQEALAVAK
Specific function: Histidine biosynthesis; fourth step. [C]
COG id: COG0106
COG function: function code E; Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hisA/hisF family [H]
Homologues:
Organism=Escherichia coli, GI87082028, Length=243, Percent_Identity=33.7448559670782, Blast_Score=122, Evalue=2e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006062 - InterPro: IPR010188 - InterPro: IPR023016 - InterPro: IPR011060 [H]
Pfam domain/function: PF00977 His_biosynth [H]
EC number: =5.3.1.16 [H]
Molecular weight: Translated: 25758; Mature: 25627
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLTLLPAVDVRDGKAVRLRQGESGSETDYGSPFEAARTWVEAGAEWIHLVDLDAAFGTG CCEEEEECCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECHHCCCC NNRDQLREIVHELGDRVNIELSGGVRDDASLDAALEAGAARVNIGTAALENPDWTASVIK CCHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHCCCEEEEECHHHCCCCCHHHHHHH KYGDRVAVGLDVRGHTLAARGWTREGGDLFETMKFLDSVGCSRYVVTDVAKDGMMSGPNI HCCCEEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCH QLLREVAERTDAKVTASGGISKLDDLRAIKELAEIGVDSAILGKSLYARAFTLQEALAVA HHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHC K C >Mature Secondary Structure SLTLLPAVDVRDGKAVRLRQGESGSETDYGSPFEAARTWVEAGAEWIHLVDLDAAFGTG CEEEEECCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECHHCCCC NNRDQLREIVHELGDRVNIELSGGVRDDASLDAALEAGAARVNIGTAALENPDWTASVIK CCHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHCCCEEEEECHHHCCCCCHHHHHHH KYGDRVAVGLDVRGHTLAARGWTREGGDLFETMKFLDSVGCSRYVVTDVAKDGMMSGPNI HCCCEEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCH QLLREVAERTDAKVTASGGISKLDDLRAIKELAEIGVDSAILGKSLYARAFTLQEALAVA HHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHC K C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA