| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is braE [H]
Identifier: 213691650
GI number: 213691650
Start: 874742
End: 876556
Strand: Direct
Name: braE [H]
Synonym: Blon_0754
Alternate gene names: 213691650
Gene position: 874742-876556 (Clockwise)
Preceding gene: 213691649
Following gene: 213691651
Centisome position: 30.88
GC content: 61.32
Gene sequence:
>1815_bases ATGTTTGATGTTCTTTTCGCCGGACTGATACACGGCAGCGCCTATGCGCTGGTCGCAGTCGGCATGTCGCTGATCTTCGG CGTCACCAACGTGGCCAACTTCGCCCAAGGTTCCATCGTGGCCGTGGGCATGATGATCGCCTGGTGGCTCGGTTCGTCAT GGGGATGGGGAATCGTGCCCACATTCGTGGCGGTGCTCGTGGTTACCGCACTGCTGGGGCTGATCATGAACGTGGCGATC ATCGCTCCGCTTGAAGGCCGTAAACCGATTGCGGCGCTGCTCGCCACCATTGGCGTCGGCCAGGTGCTCGACAATGGTCT GCAGGTCGTCTTCGGGCCACAGACCCGACCGTTCCCGAAACTGCTGCAGACCTATAACCTGCAAGTCGCCGGCGTGCGTT TCGGCACTTCGGACATCGTGATGGTGACGCTTGCCGTCCTCTCGATGCTTGGCTTATGGGCATTCCTCAAGTTCGGCAAA GCGGGACAGGCCATTCGCGCCACTTCCCAGGATCCCGAAGCCGCCATGCAGATGGGCATCCCGGTGAAGGCCATCCGTAA CCTCTCCTTTGTGATCGGTGCCGTACTCGCCGGCGTTTCCGGCATCTTCGTGGGCTTGTTCAACGGCAACATCAATCCGA TGAATGGCGGCACCATTGGTATGACGGCGTTCGTGGCGGCCACGATCGGCGGTCTAGGCTCCATCCCGGGAGCCGTGGTC GGCGGTCTTGTGCTCGGTGTGGTGGAAGCGTTCGGCATCTCTCTGTTCGGAGACGGTGCACATGACCTCATCACCTTCGG CGCGTTGATCATCATCCTCATCGTGAAGCCGCAGGGTCTGCTTGGGCCGAAGACCGATGTCAAATCCGAGCCGCTGACCG GCACGTTCCTGGGAGGCGGCAGGGCGATCACGCTGCCCTGGTGGGGTAATCTCATCGGTGCCGTGGCACTCGTATCCACC CCGTTCTTCTTCAATGACTACCTGTCCGGCGTGGGCACTCAGGTCGCCATCTATGCCATCGCCGCCGTGGGACTGACGTT GATTTCCGGCTCCGCGGGCCAAACGATTCTGGGCATGGCAGGACCGTTCGCCGTGGGTGCCTATGCCTCCGCGATTCTGG CCACGCAGGCGCATTGGCCCTTCCTGGTGGCGTTGCCCGCCGCAGGTGTGATCGCGGCGCTTGTCGCCTCGGTGCTCACC TTCCCCGTATGGAGGTTTTCCGGCCATTATGTCGCCATCGCCACCATCGGCGTAGGTGCGGTGATGGTGGCGATCATTCG CCTCGCCGAGCCGTTGACCAAGGGTTCTCTTGGCATTCAGGGCATTCCGTTCCCGAAGGTGTTCGGCGTCACGCTGTACA CGCAGCAGATGATGTATCTGCTTGACGTGATCGTGCTGCTTGTCACGCTGGTCATCGTCATGCGTATCCGAACCGCTCAT CTGGGGCGCGTGTTCGAGGCCGTGGGATCGGATCGCGAGGCTTCGGAGGCGCTGTCCATCCGCACTGGCGCCTATAAGGC GCTCGCGTATGCGCTTGCCGCGTTTTTCGCAGGTCTCGCCGGTTCGTTGCTCGCGCACCAGTACACGTACATTGATCCGA CGATCTTCAACTCGAACATGTCGATTCTCATCCTGACCATCATCGTGCTTGGTGGTATGAACTCTCCGCTCGGCGCGGTG CTTGGCTCCATAGTGCTGATCGGAGCGCCCGAGTTGCTGCGTTTCGCTTCCGACGCGCGCATCCTGCTGTATGGCGTGCT GCTGGTGCTTGTCATCTTGTTCCGTCCCCAGGGCCTGTTCGCCCGGAAAGGCTGA
Upstream 100 bases:
>100_bases TCGATCCGATTCTGCTCATCGTCAAAGATGGCAAGTTCGAACAATACGAAGGTTGATTCTCCGGGCTTTCCCATACACCA CGAACGAGGTAACGCACACA
Downstream 100 bases:
>100_bases GTCGCCATGACCGATTCCGAGACCGTATTTTCCACCGTAGACGCCGTGACCGGCATCGATATCGACAACGAACGCCTCGA TAACGCGGATGATCTGGCTG
Product: inner-membrane translocator
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 604; Mature: 604
Protein sequence:
>604_residues MFDVLFAGLIHGSAYALVAVGMSLIFGVTNVANFAQGSIVAVGMMIAWWLGSSWGWGIVPTFVAVLVVTALLGLIMNVAI IAPLEGRKPIAALLATIGVGQVLDNGLQVVFGPQTRPFPKLLQTYNLQVAGVRFGTSDIVMVTLAVLSMLGLWAFLKFGK AGQAIRATSQDPEAAMQMGIPVKAIRNLSFVIGAVLAGVSGIFVGLFNGNINPMNGGTIGMTAFVAATIGGLGSIPGAVV GGLVLGVVEAFGISLFGDGAHDLITFGALIIILIVKPQGLLGPKTDVKSEPLTGTFLGGGRAITLPWWGNLIGAVALVST PFFFNDYLSGVGTQVAIYAIAAVGLTLISGSAGQTILGMAGPFAVGAYASAILATQAHWPFLVALPAAGVIAALVASVLT FPVWRFSGHYVAIATIGVGAVMVAIIRLAEPLTKGSLGIQGIPFPKVFGVTLYTQQMMYLLDVIVLLVTLVIVMRIRTAH LGRVFEAVGSDREASEALSIRTGAYKALAYALAAFFAGLAGSLLAHQYTYIDPTIFNSNMSILILTIIVLGGMNSPLGAV LGSIVLIGAPELLRFASDARILLYGVLLVLVILFRPQGLFARKG
Sequences:
>Translated_604_residues MFDVLFAGLIHGSAYALVAVGMSLIFGVTNVANFAQGSIVAVGMMIAWWLGSSWGWGIVPTFVAVLVVTALLGLIMNVAI IAPLEGRKPIAALLATIGVGQVLDNGLQVVFGPQTRPFPKLLQTYNLQVAGVRFGTSDIVMVTLAVLSMLGLWAFLKFGK AGQAIRATSQDPEAAMQMGIPVKAIRNLSFVIGAVLAGVSGIFVGLFNGNINPMNGGTIGMTAFVAATIGGLGSIPGAVV GGLVLGVVEAFGISLFGDGAHDLITFGALIIILIVKPQGLLGPKTDVKSEPLTGTFLGGGRAITLPWWGNLIGAVALVST PFFFNDYLSGVGTQVAIYAIAAVGLTLISGSAGQTILGMAGPFAVGAYASAILATQAHWPFLVALPAAGVIAALVASVLT FPVWRFSGHYVAIATIGVGAVMVAIIRLAEPLTKGSLGIQGIPFPKVFGVTLYTQQMMYLLDVIVLLVTLVIVMRIRTAH LGRVFEAVGSDREASEALSIRTGAYKALAYALAAFFAGLAGSLLAHQYTYIDPTIFNSNMSILILTIIVLGGMNSPLGAV LGSIVLIGAPELLRFASDARILLYGVLLVLVILFRPQGLFARKG >Mature_604_residues MFDVLFAGLIHGSAYALVAVGMSLIFGVTNVANFAQGSIVAVGMMIAWWLGSSWGWGIVPTFVAVLVVTALLGLIMNVAI IAPLEGRKPIAALLATIGVGQVLDNGLQVVFGPQTRPFPKLLQTYNLQVAGVRFGTSDIVMVTLAVLSMLGLWAFLKFGK AGQAIRATSQDPEAAMQMGIPVKAIRNLSFVIGAVLAGVSGIFVGLFNGNINPMNGGTIGMTAFVAATIGGLGSIPGAVV GGLVLGVVEAFGISLFGDGAHDLITFGALIIILIVKPQGLLGPKTDVKSEPLTGTFLGGGRAITLPWWGNLIGAVALVST PFFFNDYLSGVGTQVAIYAIAAVGLTLISGSAGQTILGMAGPFAVGAYASAILATQAHWPFLVALPAAGVIAALVASVLT FPVWRFSGHYVAIATIGVGAVMVAIIRLAEPLTKGSLGIQGIPFPKVFGVTLYTQQMMYLLDVIVLLVTLVIVMRIRTAH LGRVFEAVGSDREASEALSIRTGAYKALAYALAAFFAGLAGSLLAHQYTYIDPTIFNSNMSILILTIIVLGGMNSPLGAV LGSIVLIGAPELLRFASDARILLYGVLLVLVILFRPQGLFARKG
Specific function: Component of the high affinity leucine, isoleucine, valine, transport system (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: COG0559
COG function: function code E; Branched-chain amino acid ABC-type transport system, permease components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. LivHM subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789866, Length=298, Percent_Identity=32.8859060402685, Blast_Score=144, Evalue=2e-35, Organism=Escherichia coli, GI1789865, Length=302, Percent_Identity=31.4569536423841, Blast_Score=133, Evalue=3e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 - InterPro: IPR021807 [H]
Pfam domain/function: PF02653 BPD_transp_2; PF11862 DUF3382 [H]
EC number: NA
Molecular weight: Translated: 62593; Mature: 62593
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFDVLFAGLIHGSAYALVAVGMSLIFGVTNVANFAQGSIVAVGMMIAWWLGSSWGWGIVP CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHH TFVAVLVVTALLGLIMNVAIIAPLEGRKPIAALLATIGVGQVLDNGLQVVFGPQTRPFPK HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHH LLQTYNLQVAGVRFGTSDIVMVTLAVLSMLGLWAFLKFGKAGQAIRATSQDPEAAMQMGI HHHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCHHHHHHHCC PVKAIRNLSFVIGAVLAGVSGIFVGLFNGNINPMNGGTIGMTAFVAATIGGLGSIPGAVV CHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHH GGLVLGVVEAFGISLFGDGAHDLITFGALIIILIVKPQGLLGPKTDVKSEPLTGTFLGGG HHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCEEEECCC RAITLPWWGNLIGAVALVSTPFFFNDYLSGVGTQVAIYAIAAVGLTLISGSAGQTILGMA EEEECCCHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEECC GPFAVGAYASAILATQAHWPFLVALPAAGVIAALVASVLTFPVWRFSGHYVAIATIGVGA CCHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHH VMVAIIRLAEPLTKGSLGIQGIPFPKVFGVTLYTQQMMYLLDVIVLLVTLVIVMRIRTAH HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGRVFEAVGSDREASEALSIRTGAYKALAYALAAFFAGLAGSLLAHQYTYIDPTIFNSNM HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCEEECCCH SILILTIIVLGGMNSPLGAVLGSIVLIGAPELLRFASDARILLYGVLLVLVILFRPQGLF HHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCC ARKG CCCC >Mature Secondary Structure MFDVLFAGLIHGSAYALVAVGMSLIFGVTNVANFAQGSIVAVGMMIAWWLGSSWGWGIVP CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHH TFVAVLVVTALLGLIMNVAIIAPLEGRKPIAALLATIGVGQVLDNGLQVVFGPQTRPFPK HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHH LLQTYNLQVAGVRFGTSDIVMVTLAVLSMLGLWAFLKFGKAGQAIRATSQDPEAAMQMGI HHHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCHHHHHHHCC PVKAIRNLSFVIGAVLAGVSGIFVGLFNGNINPMNGGTIGMTAFVAATIGGLGSIPGAVV CHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHH GGLVLGVVEAFGISLFGDGAHDLITFGALIIILIVKPQGLLGPKTDVKSEPLTGTFLGGG HHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCEEEECCC RAITLPWWGNLIGAVALVSTPFFFNDYLSGVGTQVAIYAIAAVGLTLISGSAGQTILGMA EEEECCCHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEECC GPFAVGAYASAILATQAHWPFLVALPAAGVIAALVASVLTFPVWRFSGHYVAIATIGVGA CCHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHH VMVAIIRLAEPLTKGSLGIQGIPFPKVFGVTLYTQQMMYLLDVIVLLVTLVIVMRIRTAH HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGRVFEAVGSDREASEALSIRTGAYKALAYALAAFFAGLAGSLLAHQYTYIDPTIFNSNM HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCEEECCCH SILILTIIVLGGMNSPLGAVLGSIVLIGAPELLRFASDARILLYGVLLVLVILFRPQGLF HHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCC ARKG CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2120183; 10984043 [H]