| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is livJ [C]
Identifier: 213691649
GI number: 213691649
Start: 873534
End: 874697
Strand: Direct
Name: livJ [C]
Synonym: Blon_0753
Alternate gene names: 213691649
Gene position: 873534-874697 (Clockwise)
Preceding gene: 213691648
Following gene: 213691650
Centisome position: 30.84
GC content: 58.08
Gene sequence:
>1164_bases ATGACCATCAAGACAATCATCCGTACGGCGATCGCATCCGTGGTCACTGCGGGAACACTGATTGGCGTCTCCGCATGCGG CCTTGGCGGGGATGCCGCCAGCGGTTCCAGCGACGACACCGTGAACATCGGAGTCATCTATCCGAAGACCGGGCAATATG CGCAATACGGCAAACTGTTCCAGCAAGGCTTCGATCTGGCGGTTGCCAAGGTGAACAAGGATGGCGGCGTCAAGGGTAAG AAGCTTGGTCTTCGATACTATGACACGCAGTCCGATGCCAAGCAAGACGCCGCGGTGGCTCCCAAGATCGTGTCGGACAA GTCGATCATCGCCGTGGTGGGTGACTATGCCTCGCCCGCATCCTCGGCCGCGTCGCCCATCTTCCAGCAGGCCGGCCTCG TGCATTACGGTTTCAATAATTCGGCACCCACCTTTACCGATACCGGGGACCACGTATGGACTCCCCAGATCGGTCAGGAC AAGTATCAGAAGACCAACGCGGATATAGTGGCCAAAAAAGCCAAGAAGATCGCGGTGGTCTACATCGAGAACGACTGGGG CAAACAGGCCTATCGGTACTTCAAGCAGGAGGCCGAGAAAAACGGTACCCAGATTGTGTACGAGTCCAGCTATCTGCCCG ACTCCACCGACTTGTCGCCGATTCTGATTCCGGCGCGCGATGCCAAGCCTGACGCGGTGGTCGACATCGGCTACGGGCCG GACGGCGCTCTGGTGATCAATACCCTGCGCGACAAGCTGGGGTACGACGGCCTGTACTTCGGTGGTCAGGAAACCAAGGA GTTCCTCGATCTCGCCGGCAAAAACGCCGAGGGTTCGATCATCACCGGATCCTTCTCCGCCACCGGCACCAAGGACGCCA AGGCCCAGCAGTTCGTCAAGGACTTCAAGGCCAAGTACGGCAACAACCCGGGCAATTTCGAAGTGACCGCCTACGAGGCG ATCATCGATCTGGCCTATGCCGCCAACAAGACCGAACCGACCCGTGAAGGCATACAGAAGGCGCTGCAGACCGTGACGGA TTTCCCGCTCTACCAGGGCAATGGCGGCACGTTCAAATTCGATCGGCAGAGTCGTCGCGCCGATAACATCGATCCGATTC TGCTCATCGTCAAAGATGGCAAGTTCGAACAATACGAAGGTTGA
Upstream 100 bases:
>100_bases CGGCGGGCGACGAGGCGCTGCAGGCATTGAGCGACATCCGCGTGGGCTGAGCCGGTCCCCATTTACGCTTCATGATTATT CGAATAGAGAAGGGAACATC
Downstream 100 bases:
>100_bases TTCTCCGGGCTTTCCCATACACCACGAACGAGGTAACGCACACAATGTTTGATGTTCTTTTCGCCGGACTGATACACGGC AGCGCCTATGCGCTGGTCGC
Product: Extracellular ligand-binding receptor
Products: ADP; phosphate; L-leucine [Cytoplasm]; ADP; L-valine [Cytoplasm]; L-iso-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 387; Mature: 386
Protein sequence:
>387_residues MTIKTIIRTAIASVVTAGTLIGVSACGLGGDAASGSSDDTVNIGVIYPKTGQYAQYGKLFQQGFDLAVAKVNKDGGVKGK KLGLRYYDTQSDAKQDAAVAPKIVSDKSIIAVVGDYASPASSAASPIFQQAGLVHYGFNNSAPTFTDTGDHVWTPQIGQD KYQKTNADIVAKKAKKIAVVYIENDWGKQAYRYFKQEAEKNGTQIVYESSYLPDSTDLSPILIPARDAKPDAVVDIGYGP DGALVINTLRDKLGYDGLYFGGQETKEFLDLAGKNAEGSIITGSFSATGTKDAKAQQFVKDFKAKYGNNPGNFEVTAYEA IIDLAYAANKTEPTREGIQKALQTVTDFPLYQGNGGTFKFDRQSRRADNIDPILLIVKDGKFEQYEG
Sequences:
>Translated_387_residues MTIKTIIRTAIASVVTAGTLIGVSACGLGGDAASGSSDDTVNIGVIYPKTGQYAQYGKLFQQGFDLAVAKVNKDGGVKGK KLGLRYYDTQSDAKQDAAVAPKIVSDKSIIAVVGDYASPASSAASPIFQQAGLVHYGFNNSAPTFTDTGDHVWTPQIGQD KYQKTNADIVAKKAKKIAVVYIENDWGKQAYRYFKQEAEKNGTQIVYESSYLPDSTDLSPILIPARDAKPDAVVDIGYGP DGALVINTLRDKLGYDGLYFGGQETKEFLDLAGKNAEGSIITGSFSATGTKDAKAQQFVKDFKAKYGNNPGNFEVTAYEA IIDLAYAANKTEPTREGIQKALQTVTDFPLYQGNGGTFKFDRQSRRADNIDPILLIVKDGKFEQYEG >Mature_386_residues TIKTIIRTAIASVVTAGTLIGVSACGLGGDAASGSSDDTVNIGVIYPKTGQYAQYGKLFQQGFDLAVAKVNKDGGVKGKK LGLRYYDTQSDAKQDAAVAPKIVSDKSIIAVVGDYASPASSAASPIFQQAGLVHYGFNNSAPTFTDTGDHVWTPQIGQDK YQKTNADIVAKKAKKIAVVYIENDWGKQAYRYFKQEAEKNGTQIVYESSYLPDSTDLSPILIPARDAKPDAVVDIGYGPD GALVINTLRDKLGYDGLYFGGQETKEFLDLAGKNAEGSIITGSFSATGTKDAKAQQFVKDFKAKYGNNPGNFEVTAYEAI IDLAYAANKTEPTREGIQKALQTVTDFPLYQGNGGTFKFDRQSRRADNIDPILLIVKDGKFEQYEG
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI48994941, Length=303, Percent_Identity=27.7227722772277, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1789867, Length=298, Percent_Identity=25.8389261744966, Blast_Score=78, Evalue=9e-16,
Paralogues:
None
Copy number: 10140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 8822 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal med
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 41612; Mature: 41481
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIKTIIRTAIASVVTAGTLIGVSACGLGGDAASGSSDDTVNIGVIYPKTGQYAQYGKLF CCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHH QQGFDLAVAKVNKDGGVKGKKLGLRYYDTQSDAKQDAAVAPKIVSDKSIIAVVGDYASPA HHCCCEEEEEECCCCCCCCCEECEEEECCCCCCHHHHHCCCCCCCCCEEEEEEECCCCCC SSAASPIFQQAGLVHYGFNNSAPTFTDTGDHVWTPQIGQDKYQKTNADIVAKKAKKIAVV HHHHHHHHHHCCEEEECCCCCCCCCCCCCCEEECCCCCCHHHHHCCHHHHEECCCEEEEE YIENDWGKQAYRYFKQEAEKNGTQIVYESSYLPDSTDLSPILIPARDAKPDAVVDIGYGP EEECCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCEEEECCCCC DGALVINTLRDKLGYDGLYFGGQETKEFLDLAGKNAEGSIITGSFSATGTKDAKAQQFVK CCCEEEEHHHHHHCCCCEEECCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHH DFKAKYGNNPGNFEVTAYEAIIDLAYAANKTEPTREGIQKALQTVTDFPLYQGNGGTFKF HHHHHHCCCCCCEEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEECCCCEEEE DRQSRRADNIDPILLIVKDGKFEQYEG CCHHCCCCCCCEEEEEEECCCCCCCCC >Mature Secondary Structure TIKTIIRTAIASVVTAGTLIGVSACGLGGDAASGSSDDTVNIGVIYPKTGQYAQYGKLF CHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHH QQGFDLAVAKVNKDGGVKGKKLGLRYYDTQSDAKQDAAVAPKIVSDKSIIAVVGDYASPA HHCCCEEEEEECCCCCCCCCEECEEEECCCCCCHHHHHCCCCCCCCCEEEEEEECCCCCC SSAASPIFQQAGLVHYGFNNSAPTFTDTGDHVWTPQIGQDKYQKTNADIVAKKAKKIAVV HHHHHHHHHHCCEEEECCCCCCCCCCCCCCEEECCCCCCHHHHHCCHHHHEECCCEEEEE YIENDWGKQAYRYFKQEAEKNGTQIVYESSYLPDSTDLSPILIPARDAKPDAVVDIGYGP EEECCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCEEEECCCCC DGALVINTLRDKLGYDGLYFGGQETKEFLDLAGKNAEGSIITGSFSATGTKDAKAQQFVK CCCEEEEHHHHHHCCCCEEECCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHH DFKAKYGNNPGNFEVTAYEAIIDLAYAANKTEPTREGIQKALQTVTDFPLYQGNGGTFKF HHHHHHCCCCCCEEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEECCCCEEEE DRQSRRADNIDPILLIVKDGKFEQYEG CCHHCCCCCCCEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O; ATP; L-valine [Periplasm]; L-iso-leucine [Periplasm] [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11756688 [H]