| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691646
Identifier: 213691646
GI number: 213691646
Start: 870574
End: 871362
Strand: Reverse
Name: 213691646
Synonym: Blon_0750
Alternate gene names: NA
Gene position: 871362-870574 (Counterclockwise)
Preceding gene: 213691647
Following gene: 213691639
Centisome position: 30.76
GC content: 61.98
Gene sequence:
>789_bases ATGACGCAACAATTCACCTGGGACCATACGGTCGAATTCGTGAATGACCTCAAGTCCGCCGAACGGACGTTCGCCGACGC AGGGCTGACTTCCCAATACGGCGGCAAGCACGTGGGGCATGGCACGGAGAACTCCTTGGCCTACTTCGCCGATAACTATC TGGAGTTCCTGGCATTGTACGACCGCGAGGAAGCCTTGTCGGAGACGCCGGACCATGGGCTGATATTCCATGAAGCCGGG GAGCTGCTGCCCGAGTATGTGGGATTCTATCGTCCGGCATTGCACGTGCATGGCATCGAACAGGCGGCCGAACGGCTCAC GGCCAAAGGCCTTGATCTTGGCCATATCGTTCCGGGCAATCGCACGACGGCCGCCGGTGAGGAGATACGCTGGCGGTTGC TCTGGATCAAGGGCGATGATCGGGGCCTGCGCTATCCGTTCGTCATCGATTGGGGTGCGAGCGAATCCGAGCAACTGGCC CGCTACGAGAGCGGCGGACTGCTGCACCGGCATGCCATAGGCGAAGTGGACACCCGTCGCGCGATTTTCGCGGTGCCCGA CCCCGCGGCGGTGGCCGCGCACTGGTCCGACGTGTTTGGTTTGGGTCTCACGGAAGGCGGGGACGCCGACCGGCCCGATG AGCACTATTTCGATCTCGATGTGGGAGGGCATCGTGTCTGGCGCTTCGTCCAGGGTCAATGCAACGCCATCACCGAACTG CAGTACGACGCCCCCGCCGGCAAATCCTTCGATGTGACCATCGGCCAGGCGCGATTCAGAAGCCTGTAA
Upstream 100 bases:
>100_bases CAAAACCGGATTCGCGGCATCCATACAATCCGCGGTGCTGGCGGCGGTCGAGCGCACCACGGCGCTCGGCGGCGATGCAA AGTAAAGACGGGAGCCGATC
Downstream 100 bases:
>100_bases GTACGGTCCACACACAACCGCAACAACGCATGAGGCGTGTGCCACCAATCCAATGGTGGCACACGCCTCATGCCGTAAGA GGGCCCTGCCAATCAGTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 262; Mature: 261
Protein sequence:
>262_residues MTQQFTWDHTVEFVNDLKSAERTFADAGLTSQYGGKHVGHGTENSLAYFADNYLEFLALYDREEALSETPDHGLIFHEAG ELLPEYVGFYRPALHVHGIEQAAERLTAKGLDLGHIVPGNRTTAAGEEIRWRLLWIKGDDRGLRYPFVIDWGASESEQLA RYESGGLLHRHAIGEVDTRRAIFAVPDPAAVAAHWSDVFGLGLTEGGDADRPDEHYFDLDVGGHRVWRFVQGQCNAITEL QYDAPAGKSFDVTIGQARFRSL
Sequences:
>Translated_262_residues MTQQFTWDHTVEFVNDLKSAERTFADAGLTSQYGGKHVGHGTENSLAYFADNYLEFLALYDREEALSETPDHGLIFHEAG ELLPEYVGFYRPALHVHGIEQAAERLTAKGLDLGHIVPGNRTTAAGEEIRWRLLWIKGDDRGLRYPFVIDWGASESEQLA RYESGGLLHRHAIGEVDTRRAIFAVPDPAAVAAHWSDVFGLGLTEGGDADRPDEHYFDLDVGGHRVWRFVQGQCNAITEL QYDAPAGKSFDVTIGQARFRSL >Mature_261_residues TQQFTWDHTVEFVNDLKSAERTFADAGLTSQYGGKHVGHGTENSLAYFADNYLEFLALYDREEALSETPDHGLIFHEAGE LLPEYVGFYRPALHVHGIEQAAERLTAKGLDLGHIVPGNRTTAAGEEIRWRLLWIKGDDRGLRYPFVIDWGASESEQLAR YESGGLLHRHAIGEVDTRRAIFAVPDPAAVAAHWSDVFGLGLTEGGDADRPDEHYFDLDVGGHRVWRFVQGQCNAITELQ YDAPAGKSFDVTIGQARFRSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29230; Mature: 29098
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQQFTWDHTVEFVNDLKSAERTFADAGLTSQYGGKHVGHGTENSLAYFADNYLEFLALY CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH DREEALSETPDHGLIFHEAGELLPEYVGFYRPALHVHGIEQAAERLTAKGLDLGHIVPGN CHHHHHHCCCCCCEEEEHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHCCCCCCEECCCC RTTAAGEEIRWRLLWIKGDDRGLRYPFVIDWGASESEQLARYESGGLLHRHAIGEVDTRR CCCCCCCCEEEEEEEEECCCCCCCCCEEEECCCCCHHHHHHHHCCCEEEEHHCCCCCCCE AIFAVPDPAAVAAHWSDVFGLGLTEGGDADRPDEHYFDLDVGGHRVWRFVQGQCNAITEL EEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHCCCCEEEEE QYDAPAGKSFDVTIGQARFRSL EECCCCCCEEEEEECHHHHCCC >Mature Secondary Structure TQQFTWDHTVEFVNDLKSAERTFADAGLTSQYGGKHVGHGTENSLAYFADNYLEFLALY CCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH DREEALSETPDHGLIFHEAGELLPEYVGFYRPALHVHGIEQAAERLTAKGLDLGHIVPGN CHHHHHHCCCCCCEEEEHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHCCCCCCEECCCC RTTAAGEEIRWRLLWIKGDDRGLRYPFVIDWGASESEQLARYESGGLLHRHAIGEVDTRR CCCCCCCCEEEEEEEEECCCCCCCCCEEEECCCCCHHHHHHHHCCCEEEEHHCCCCCCCE AIFAVPDPAAVAAHWSDVFGLGLTEGGDADRPDEHYFDLDVGGHRVWRFVQGQCNAITEL EEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHCCCCEEEEE QYDAPAGKSFDVTIGQARFRSL EECCCCCCEEEEEECHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA