| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
Click here to switch to the map view.
The map label for this gene is proC [H]
Identifier: 213691647
GI number: 213691647
Start: 871378
End: 872181
Strand: Reverse
Name: proC [H]
Synonym: Blon_0751
Alternate gene names: 213691647
Gene position: 872181-871378 (Counterclockwise)
Preceding gene: 213691659
Following gene: 213691646
Centisome position: 30.79
GC content: 60.95
Gene sequence:
>804_bases ATGGGAGCGAACCTGTATTTCATCGGCGGAGGCAATATGCCGAGCGCCATCATAGAAGCGGTGCGACGTAAGGCCGCCGC ATATCCGGTCGACCACATCTGGGTTGAGGAAATCTCACGGGAACGCGCCGAATATCTGGCATCCACGTACAACACCGAGA CGGCGTCACCGACGGACGCCCCGGATGCCGACATCGTGGTAATCGCGGTGCGCCCGCAAGACGATGTCGCCGGCGTGGCC GCTTCAGTGGCGCGACGTTTCGACCCGGCGAAGACCACGGTGATCTCCATCGTAGCCGGCTATACCATCGCCAAGCTTGA GCAAGGGCTCGGCCATGGGTGGCGTGTGGCCCGCATCATCCCGAACACACTCACCACCGTGGATTACGGTTACAGCGGCG TGGCGCTGAATGGGGCCGCGGCACGCGAGGACGTGGATGCGTTCCTCAACACTTTCGGCAAAGTACTGTATGTCGAGGAA CGACTTATCGACGTAATCACCGGTTTTTACCCGCCGAACATCGTCTACCATTTCATCGACGCCTACGTGGATGCCGGTGT GCTGGCCGGTCTGCCCCGGGACGCGGCCAGAGCCATCGCGCTCGACACCATCATCGGCGGCACCGAATTCCTCAAACAGA AAGACGTGCTGCCTCAAGTGCTGCTCAATATCAACAACTCCCCCGGCGGAGTGGGAATCACCGAGGCATATACCCTGAAC AAAACCGGATTCGCGGCATCCATACAATCCGCGGTGCTGGCGGCGGTCGAGCGCACCACGGCGCTCGGCGGCGATGCAAA GTAA
Upstream 100 bases:
>100_bases CCTATATGCCATTTCGGAAGGAACGACGACGGTTCGGGAATCCATGCGGTATTACGGGAACTGACATACATCCGTATCCA TCATCAGAAGAGGTGAACCG
Downstream 100 bases:
>100_bases AGACGGGAGCCGATCATGACGCAACAATTCACCTGGGACCATACGGTCGAATTCGTGAATGACCTCAAGTCCGCCGAACG GACGTTCGCCGACGCAGGGC
Product: NADP oxidoreductase, coenzyme F420-dependent
Products: NA
Alternate protein names: P5C reductase; P5CR [H]
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MGANLYFIGGGNMPSAIIEAVRRKAAAYPVDHIWVEEISRERAEYLASTYNTETASPTDAPDADIVVIAVRPQDDVAGVA ASVARRFDPAKTTVISIVAGYTIAKLEQGLGHGWRVARIIPNTLTTVDYGYSGVALNGAAAREDVDAFLNTFGKVLYVEE RLIDVITGFYPPNIVYHFIDAYVDAGVLAGLPRDAARAIALDTIIGGTEFLKQKDVLPQVLLNINNSPGGVGITEAYTLN KTGFAASIQSAVLAAVERTTALGGDAK
Sequences:
>Translated_267_residues MGANLYFIGGGNMPSAIIEAVRRKAAAYPVDHIWVEEISRERAEYLASTYNTETASPTDAPDADIVVIAVRPQDDVAGVA ASVARRFDPAKTTVISIVAGYTIAKLEQGLGHGWRVARIIPNTLTTVDYGYSGVALNGAAAREDVDAFLNTFGKVLYVEE RLIDVITGFYPPNIVYHFIDAYVDAGVLAGLPRDAARAIALDTIIGGTEFLKQKDVLPQVLLNINNSPGGVGITEAYTLN KTGFAASIQSAVLAAVERTTALGGDAK >Mature_266_residues GANLYFIGGGNMPSAIIEAVRRKAAAYPVDHIWVEEISRERAEYLASTYNTETASPTDAPDADIVVIAVRPQDDVAGVAA SVARRFDPAKTTVISIVAGYTIAKLEQGLGHGWRVARIIPNTLTTVDYGYSGVALNGAAAREDVDAFLNTFGKVLYVEER LIDVITGFYPPNIVYHFIDAYVDAGVLAGLPRDAARAIALDTIIGGTEFLKQKDVLPQVLLNINNSPGGVGITEAYTLNK TGFAASIQSAVLAAVERTTALGGDAK
Specific function: Proline biosynthesis; third (last) step. [C]
COG id: COG0345
COG function: function code E; Pyrroline-5-carboxylate reductase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pyrroline-5-carboxylate reductase family [H]
Homologues:
Organism=Homo sapiens, GI24797097, Length=227, Percent_Identity=30.3964757709251, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI24797095, Length=227, Percent_Identity=30.3964757709251, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI198041662, Length=265, Percent_Identity=26.7924528301887, Blast_Score=75, Evalue=9e-14, Organism=Homo sapiens, GI21361454, Length=214, Percent_Identity=30.3738317757009, Blast_Score=72, Evalue=6e-13, Organism=Escherichia coli, GI1786585, Length=272, Percent_Identity=29.7794117647059, Blast_Score=107, Evalue=1e-24, Organism=Caenorhabditis elegans, GI17569021, Length=269, Percent_Identity=30.4832713754647, Blast_Score=93, Evalue=1e-19, Organism=Drosophila melanogaster, GI24648116, Length=274, Percent_Identity=30.2919708029197, Blast_Score=92, Evalue=3e-19, Organism=Drosophila melanogaster, GI21358587, Length=271, Percent_Identity=27.6752767527675, Blast_Score=86, Evalue=3e-17, Organism=Drosophila melanogaster, GI24647700, Length=173, Percent_Identity=29.4797687861272, Blast_Score=70, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR016040 - InterPro: IPR004455 - InterPro: IPR000304 [H]
Pfam domain/function: PF03807 F420_oxidored [H]
EC number: =1.5.1.2 [H]
Molecular weight: Translated: 28329; Mature: 28198
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGANLYFIGGGNMPSAIIEAVRRKAAAYPVDHIWVEEISRERAEYLASTYNTETASPTDA CCCEEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC PDADIVVIAVRPQDDVAGVAASVARRFDPAKTTVISIVAGYTIAKLEQGLGHGWRVARII CCCCEEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC PNTLTTVDYGYSGVALNGAAAREDVDAFLNTFGKVLYVEERLIDVITGFYPPNIVYHFID CCHHHEECCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH AYVDAGVLAGLPRDAARAIALDTIIGGTEFLKQKDVLPQVLLNINNSPGGVGITEAYTLN HHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEC KTGFAASIQSAVLAAVERTTALGGDAK CCCHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure GANLYFIGGGNMPSAIIEAVRRKAAAYPVDHIWVEEISRERAEYLASTYNTETASPTDA CCEEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC PDADIVVIAVRPQDDVAGVAASVARRFDPAKTTVISIVAGYTIAKLEQGLGHGWRVARII CCCCEEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC PNTLTTVDYGYSGVALNGAAAREDVDAFLNTFGKVLYVEERLIDVITGFYPPNIVYHFID CCHHHEECCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH AYVDAGVLAGLPRDAARAIALDTIIGGTEFLKQKDVLPQVLLNINNSPGGVGITEAYTLN HHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEC KTGFAASIQSAVLAAVERTTALGGDAK CCCHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]