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The map label for this gene is pyrF [H]

Identifier: 213691635

GI number: 213691635

Start: 859365

End: 860285

Strand: Direct

Name: pyrF [H]

Synonym: Blon_0739

Alternate gene names: 213691635

Gene position: 859365-860285 (Clockwise)

Preceding gene: 213691634

Following gene: 213691636

Centisome position: 30.34

GC content: 63.3

Gene sequence:

>921_bases
ATGACTACACCCAGCAGTGAGGAATTGCAGGCACAACGTTCGGATTTCGGTCTGCGATTAAGCAATTCAATGGCCAAATA
CGGGCCGCTGTGTGTGGGCATTGACCCGCATCGCAAGCTCCTCACCGACTGGGGATACAACGTCGACGCCGAAGGCGCCG
AACTCTTCTCCATGCGTATGCTGCAGGCCGCCAACGGGCGCGCCGCAGCAGTCAAATTCCAGACGCCGATGTTCGAGCGT
TACGGGGCCAAGGGCTTCGAAGCGCTCGAACGCGTGCTGTACGCGGCACGCCAGATGGGCGTCATCACCATCGTGGATTG
CCTGCATGGAGGCCTGTCCACCACGATTTCCGCCATCGCGGACGCCTACTTCAAGCCCGGCGCCCCGATGCTGGCCGACG
CCATCACCCTGCTGCCGTACTATGGCGCGCGCTCGTTGAACGGCCTGATTACCGAAGCGTTGGAAAACGGACGCGGTGTG
TTCATCGCCTCCCTGACTTCCAATCCGGAAGGCATGAGTCTGCAGACCGCGCTGCGCCAGAGCGGCGACTACAAGGGGCG
CACTGTGGCCTACGGCATCGCCTCCACCGCACAGAAGCACAACGTGGATATCGGAGGCATGGGCTCGGTGGGCCTTATCA
TCGGCGCCACCATCGGCCAATGGACGCAGGATTCCGGCGTGGACCCCTCCAAGTTCACCGGCCCGATTCTTTCCCCTGGC
TACGGCTGGCAGGGCGCCGAGGCCAAGGACCTGAAAACCGTGTTCCGCGGTACGCGCGGCAACGTGTTGGTCACCGTGTC
CCGCTTCATCGCCTCGCACGGGCCGGATATCGCCGCATTGAGCCAGGCCACCGAGTCGATTGCGCTCGACGTGCGCCAGG
CCCTGATGGAGGCCACCGCCGAAGGCGCGGAGAATCAGTGA

Upstream 100 bases:

>100_bases
CACTGCTCGCTATCGAGGCCGTGAAGCATAATGATTATCAGATCATGAGCATTCAGGAGCATTCGAAGCAGTTGTTCGAA
TTGGAGCGACGGGAGTTCTG

Downstream 100 bases:

>100_bases
TCAGAACGGAATCAGATGTCGCGGCATGCGTACGTGTGTATCTCATCGCGTACGTCGCATCACGATTCATATTCTTCCCT
GTTCGTCGGGGCTGTAACAG

Product: orotidine 5'-phosphate decarboxylase

Products: NA

Alternate protein names: OMP decarboxylase; OMPDCase; OMPdecase [H]

Number of amino acids: Translated: 306; Mature: 305

Protein sequence:

>306_residues
MTTPSSEELQAQRSDFGLRLSNSMAKYGPLCVGIDPHRKLLTDWGYNVDAEGAELFSMRMLQAANGRAAAVKFQTPMFER
YGAKGFEALERVLYAARQMGVITIVDCLHGGLSTTISAIADAYFKPGAPMLADAITLLPYYGARSLNGLITEALENGRGV
FIASLTSNPEGMSLQTALRQSGDYKGRTVAYGIASTAQKHNVDIGGMGSVGLIIGATIGQWTQDSGVDPSKFTGPILSPG
YGWQGAEAKDLKTVFRGTRGNVLVTVSRFIASHGPDIAALSQATESIALDVRQALMEATAEGAENQ

Sequences:

>Translated_306_residues
MTTPSSEELQAQRSDFGLRLSNSMAKYGPLCVGIDPHRKLLTDWGYNVDAEGAELFSMRMLQAANGRAAAVKFQTPMFER
YGAKGFEALERVLYAARQMGVITIVDCLHGGLSTTISAIADAYFKPGAPMLADAITLLPYYGARSLNGLITEALENGRGV
FIASLTSNPEGMSLQTALRQSGDYKGRTVAYGIASTAQKHNVDIGGMGSVGLIIGATIGQWTQDSGVDPSKFTGPILSPG
YGWQGAEAKDLKTVFRGTRGNVLVTVSRFIASHGPDIAALSQATESIALDVRQALMEATAEGAENQ
>Mature_305_residues
TTPSSEELQAQRSDFGLRLSNSMAKYGPLCVGIDPHRKLLTDWGYNVDAEGAELFSMRMLQAANGRAAAVKFQTPMFERY
GAKGFEALERVLYAARQMGVITIVDCLHGGLSTTISAIADAYFKPGAPMLADAITLLPYYGARSLNGLITEALENGRGVF
IASLTSNPEGMSLQTALRQSGDYKGRTVAYGIASTAQKHNVDIGGMGSVGLIIGATIGQWTQDSGVDPSKFTGPILSPGY
GWQGAEAKDLKTVFRGTRGNVLVTVSRFIASHGPDIAALSQATESIALDVRQALMEATAEGAENQ

Specific function: Unknown

COG id: COG0284

COG function: function code F; Orotidine-5'-phosphate decarboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OMP decarboxylase family. Type 2 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR018089
- InterPro:   IPR011995
- InterPro:   IPR001754
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00215 OMPdecase [H]

EC number: =4.1.1.23 [H]

Molecular weight: Translated: 32477; Mature: 32346

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTPSSEELQAQRSDFGLRLSNSMAKYGPLCVGIDPHRKLLTDWGYNVDAEGAELFSMRM
CCCCCHHHHHHHHHCCCEEECCCHHHHCCEEECCCHHHHHHHHCCCCCCCCHHHHHHHHH
LQAANGRAAAVKFQTPMFERYGAKGFEALERVLYAARQMGVITIVDCLHGGLSTTISAIA
HHHCCCCEEEEEECCCHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHH
DAYFKPGAPMLADAITLLPYYGARSLNGLITEALENGRGVFIASLTSNPEGMSLQTALRQ
HHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHH
SGDYKGRTVAYGIASTAQKHNVDIGGMGSVGLIIGATIGQWTQDSGVDPSKFTGPILSPG
CCCCCCCEEEEEHHHHHHHHCCCCCCCCCHHHHEECHHCCCCCCCCCCHHHCCCCCCCCC
YGWQGAEAKDLKTVFRGTRGNVLVTVSRFIASHGPDIAALSQATESIALDVRQALMEATA
CCCCCCCHHHHHHHHCCCCCCEEEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
EGAENQ
CCCCCC
>Mature Secondary Structure 
TTPSSEELQAQRSDFGLRLSNSMAKYGPLCVGIDPHRKLLTDWGYNVDAEGAELFSMRM
CCCCHHHHHHHHHCCCEEECCCHHHHCCEEECCCHHHHHHHHCCCCCCCCHHHHHHHHH
LQAANGRAAAVKFQTPMFERYGAKGFEALERVLYAARQMGVITIVDCLHGGLSTTISAIA
HHHCCCCEEEEEECCCHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHH
DAYFKPGAPMLADAITLLPYYGARSLNGLITEALENGRGVFIASLTSNPEGMSLQTALRQ
HHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHH
SGDYKGRTVAYGIASTAQKHNVDIGGMGSVGLIIGATIGQWTQDSGVDPSKFTGPILSPG
CCCCCCCEEEEEHHHHHHHHCCCCCCCCCHHHHEECHHCCCCCCCCCCHHHCCCCCCCCC
YGWQGAEAKDLKTVFRGTRGNVLVTVSRFIASHGPDIAALSQATESIALDVRQALMEATA
CCCCCCCHHHHHHHHCCCCCCEEEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
EGAENQ
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA