| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is gmk [H]
Identifier: 213691636
GI number: 213691636
Start: 860465
End: 861055
Strand: Direct
Name: gmk [H]
Synonym: Blon_0740
Alternate gene names: 213691636
Gene position: 860465-861055 (Clockwise)
Preceding gene: 213691635
Following gene: 213691638
Centisome position: 30.38
GC content: 64.13
Gene sequence:
>591_bases ATGACTGAAAACACCCATGCCGGCCGTCTAATCGTCCTGACTGGCCCCACCGCAGTAGGTAAAGGCACTGTGGAGGCCAA GCTGCGCGCCGACCACCCCGAAGTGTGGGTGTCCGTTTCCGCCACCACGCGCGCTCCGCGCCCCGGCGAGGTTGATGGCG TCAACTACTGGTTCCTCGCTGAAGACGAGTTCCTGGCCCGCGAAGCGGCGGGGGAGTTCCTGGAAACCGCCGTGGTGCAC GGCATGGCCCACTACGGTACATTGCTGGCTCCGGTGGAGGAGCATCTGGCTGCCGGCGTGCCAACAATTCTGGAAATCGA TTTGCAGGGCGCCCGCCGCGTCAAGCAGCGCGCCGCCGAACTCGACTTGGAAGTGGTGTACGTGTTCATCGCGCCGCCGA GCTTTGAAGAGCTCGAGCGCCGTCTGATCGGCCGCGGCACCGAAACCGCCGAACAGCAGGCCCGTCGCCTGGAAACCGCC AAAGTGGAGCTCGCCGCCGAAAACGAATTCGACGTCACCATCGTCAACGAAACCGTCGATCAGGCCGCCGCCGACCTCTG GTCCGTCATCGCCAAGGAATACGGGCTGTAA
Upstream 100 bases:
>100_bases TGTTCGTCGGGGCTGTAACAGTTACCGGTCATCTCGCCGGTGAGCCGTTACCACATTGGATTCATAATCGCTGCACACCA CATCATCTCCGGAGGAACCC
Downstream 100 bases:
>100_bases CGTGTGCGAATAGGTTCTGTTCGTACTGAGATGTCCATGCTTGGCATGGTGTGCTCATGTGATTATGCGTGTTCAGTCCC TGCCAGTCGGCCCTCACAAT
Product: guanylate kinase
Products: NA
Alternate protein names: GMP kinase [H]
Number of amino acids: Translated: 196; Mature: 195
Protein sequence:
>196_residues MTENTHAGRLIVLTGPTAVGKGTVEAKLRADHPEVWVSVSATTRAPRPGEVDGVNYWFLAEDEFLAREAAGEFLETAVVH GMAHYGTLLAPVEEHLAAGVPTILEIDLQGARRVKQRAAELDLEVVYVFIAPPSFEELERRLIGRGTETAEQQARRLETA KVELAAENEFDVTIVNETVDQAAADLWSVIAKEYGL
Sequences:
>Translated_196_residues MTENTHAGRLIVLTGPTAVGKGTVEAKLRADHPEVWVSVSATTRAPRPGEVDGVNYWFLAEDEFLAREAAGEFLETAVVH GMAHYGTLLAPVEEHLAAGVPTILEIDLQGARRVKQRAAELDLEVVYVFIAPPSFEELERRLIGRGTETAEQQARRLETA KVELAAENEFDVTIVNETVDQAAADLWSVIAKEYGL >Mature_195_residues TENTHAGRLIVLTGPTAVGKGTVEAKLRADHPEVWVSVSATTRAPRPGEVDGVNYWFLAEDEFLAREAAGEFLETAVVHG MAHYGTLLAPVEEHLAAGVPTILEIDLQGARRVKQRAAELDLEVVYVFIAPPSFEELERRLIGRGTETAEQQARRLETAK VELAAENEFDVTIVNETVDQAAADLWSVIAKEYGL
Specific function: Essential for recycling GMP and indirectly, cGMP [H]
COG id: COG0194
COG function: function code F; Guanylate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 guanylate kinase-like domain [H]
Homologues:
Organism=Homo sapiens, GI226874833, Length=190, Percent_Identity=39.4736842105263, Blast_Score=125, Evalue=2e-29, Organism=Homo sapiens, GI4504221, Length=190, Percent_Identity=39.4736842105263, Blast_Score=125, Evalue=2e-29, Organism=Homo sapiens, GI226874831, Length=190, Percent_Identity=39.4736842105263, Blast_Score=125, Evalue=2e-29, Organism=Homo sapiens, GI38570142, Length=190, Percent_Identity=31.0526315789474, Blast_Score=72, Evalue=2e-13, Organism=Homo sapiens, GI262118259, Length=179, Percent_Identity=30.7262569832402, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI262118255, Length=179, Percent_Identity=30.7262569832402, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI4505237, Length=179, Percent_Identity=30.7262569832402, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI262118263, Length=179, Percent_Identity=30.7262569832402, Blast_Score=69, Evalue=4e-12, Organism=Escherichia coli, GI1790080, Length=188, Percent_Identity=40.4255319148936, Blast_Score=128, Evalue=2e-31, Organism=Caenorhabditis elegans, GI193203132, Length=187, Percent_Identity=35.8288770053476, Blast_Score=102, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17508835, Length=183, Percent_Identity=36.6120218579235, Blast_Score=101, Evalue=3e-22, Organism=Saccharomyces cerevisiae, GI6320662, Length=188, Percent_Identity=44.1489361702128, Blast_Score=137, Evalue=1e-33, Organism=Drosophila melanogaster, GI21356141, Length=189, Percent_Identity=39.6825396825397, Blast_Score=115, Evalue=2e-26, Organism=Drosophila melanogaster, GI45554489, Length=187, Percent_Identity=31.0160427807487, Blast_Score=77, Evalue=8e-15, Organism=Drosophila melanogaster, GI24640542, Length=187, Percent_Identity=31.0160427807487, Blast_Score=77, Evalue=9e-15, Organism=Drosophila melanogaster, GI45554481, Length=191, Percent_Identity=30.3664921465969, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI116007136, Length=191, Percent_Identity=31.413612565445, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI85724806, Length=191, Percent_Identity=30.3664921465969, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI161077626, Length=187, Percent_Identity=29.9465240641711, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI281362232, Length=185, Percent_Identity=29.7297297297297, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI161078485, Length=185, Percent_Identity=29.7297297297297, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI24648810, Length=185, Percent_Identity=29.7297297297297, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI24648808, Length=185, Percent_Identity=29.7297297297297, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI161078487, Length=185, Percent_Identity=29.7297297297297, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI281362230, Length=185, Percent_Identity=29.7297297297297, Blast_Score=65, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008144 - InterPro: IPR008145 - InterPro: IPR020590 - InterPro: IPR017665 [H]
Pfam domain/function: PF00625 Guanylate_kin [H]
EC number: =2.7.4.8 [H]
Molecular weight: Translated: 21432; Mature: 21301
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: PS00856 GUANYLATE_KINASE_1 ; PS50052 GUANYLATE_KINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTENTHAGRLIVLTGPTAVGKGTVEAKLRADHPEVWVSVSATTRAPRPGEVDGVNYWFLA CCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCEEEEEEE EDEFLAREAAGEFLETAVVHGMAHYGTLLAPVEEHLAAGVPTILEIDLQGARRVKQRAAE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHH LDLEVVYVFIAPPSFEELERRLIGRGTETAEQQARRLETAKVELAAENEFDVTIVNETVD CCEEEEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHEEEEEECCCCEEEEECHHHH QAAADLWSVIAKEYGL HHHHHHHHHHHHHHCC >Mature Secondary Structure TENTHAGRLIVLTGPTAVGKGTVEAKLRADHPEVWVSVSATTRAPRPGEVDGVNYWFLA CCCCCCCEEEEEECCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCEEEEEEE EDEFLAREAAGEFLETAVVHGMAHYGTLLAPVEEHLAAGVPTILEIDLQGARRVKQRAAE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHH LDLEVVYVFIAPPSFEELERRLIGRGTETAEQQARRLETAKVELAAENEFDVTIVNETVD CCEEEEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHEEEEEECCCCEEEEECHHHH QAAADLWSVIAKEYGL HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12381787 [H]