| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
Click here to switch to the map view.
The map label for this gene is 213691596
Identifier: 213691596
GI number: 213691596
Start: 802365
End: 803552
Strand: Direct
Name: 213691596
Synonym: Blon_0700
Alternate gene names: NA
Gene position: 802365-803552 (Clockwise)
Preceding gene: 213691595
Following gene: 213691598
Centisome position: 28.32
GC content: 59.93
Gene sequence:
>1188_bases ATGACTGATACCACCGAAACCATCGTGACACCGGACCCTCACGCCATCGCGCGCGCCGTGCTGCTCGAAGTGGCCGACGA GAGCGATCAGGTGGGGGATTTCGTTACCTCATATGATCTTGAGGATCATGTCACTGACTTCCGCTTCGCCGCGAATATCC GTGGCTACGAAGGATGGCAATGGTCGGTGACGCTGTATCACGACGAGGAGATCGACTCCTGGACCGTCAGCGAATCCTCC TTGATCCCCACTGAGGGCGCGTTGATGCCGCCCAAGTGGATTCCTTGGAAGGATCGCCTTGAGCCCACGGATCTGGCTCC CACCGATTCGATCGGCACCGATCCGGATGACGAGCGCATCGAGGAAGGCGAAGTCGAGGAATCCTCGCTGCAGGATGTCA ACGATGCCGTCGAGGCCTTCCGACTGACCCGCCGTCACGTGCTGACCTCGTTGGGGCGTGCGCAGGCTGCCAAGCGCTGG TATGAAGGTCCGCGAGGCCCCAAAGCGTTGAGCACCAAAACCGCCGAAGGCAACCTGTGCTCCACCTGTGGTTTCTTCGT GCCGCTCGCGGGCGAACTCGACCGTATGTTCGGCGTGTGCGCCAATAAGTGGAGTCCGGATGACGGCCGCGTGGTTTCCT TGGACCACGGCTGCGGTGAGCATTCCGAAATCGAACCTCCCGAGCCAAGCCAGCTGTGGGTGCAGTCCAAGCCTGCTTTC GACGATCTGCATATCGACGTGGTGGCCGACCGCCCGCGCAAGCAGGAGCCGGCTGCCCAGGACGAGGCCGAAGGCGAAAC CGACAAGACAGGCGAGCCTGCCGGTGATGATATCGAAGCACAGAAGACTGTTGACGGGAACGCCGTCGATACCGAGCCCG CTGAGGAGGCGGCAGGCGATGGGACCTCGCAATCCCAGTCTGCCGGTGATGAGTCCGTTGCACAGAACGCATCCGATTCC GTTGTGGATGTTGATGCAGCTGATTCCAGCGACGAGTCCAAGTCTGATGCTGACGACGAGGCCACCGAAGAGGACATCCT CAACAACACCGTTGCCGATGATGATGAGGATGATGAGATGGACGACGAAGAGGATAACGTTCGTCCTTCAGACGATGTGA CTCCTGAACTCGAAACCGTCATCGATCTCATTGAGCAGCTGCGCCAGAACAGGGCGGACGAGGAATAA
Upstream 100 bases:
>100_bases TGCGCCGTCACCGTTACCCATCTGCTGCCGACAGCAAAAAGCTGGCCACGTTGCTGCGTGCGGTGGCGGATCAATTCGAT GTACAGGACTGATCTGATCT
Downstream 100 bases:
>100_bases AATAAACGCCAATCCTGCTCCCCAACAGCAGAATGTACTTTCGGATCAACTTATAGGTCTCAGCGAAGATGTTTCCTAAA AAGTAGATGGTGATGGGGTT
Product: narrowly conserved hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 395; Mature: 394
Protein sequence:
>395_residues MTDTTETIVTPDPHAIARAVLLEVADESDQVGDFVTSYDLEDHVTDFRFAANIRGYEGWQWSVTLYHDEEIDSWTVSESS LIPTEGALMPPKWIPWKDRLEPTDLAPTDSIGTDPDDERIEEGEVEESSLQDVNDAVEAFRLTRRHVLTSLGRAQAAKRW YEGPRGPKALSTKTAEGNLCSTCGFFVPLAGELDRMFGVCANKWSPDDGRVVSLDHGCGEHSEIEPPEPSQLWVQSKPAF DDLHIDVVADRPRKQEPAAQDEAEGETDKTGEPAGDDIEAQKTVDGNAVDTEPAEEAAGDGTSQSQSAGDESVAQNASDS VVDVDAADSSDESKSDADDEATEEDILNNTVADDDEDDEMDDEEDNVRPSDDVTPELETVIDLIEQLRQNRADEE
Sequences:
>Translated_395_residues MTDTTETIVTPDPHAIARAVLLEVADESDQVGDFVTSYDLEDHVTDFRFAANIRGYEGWQWSVTLYHDEEIDSWTVSESS LIPTEGALMPPKWIPWKDRLEPTDLAPTDSIGTDPDDERIEEGEVEESSLQDVNDAVEAFRLTRRHVLTSLGRAQAAKRW YEGPRGPKALSTKTAEGNLCSTCGFFVPLAGELDRMFGVCANKWSPDDGRVVSLDHGCGEHSEIEPPEPSQLWVQSKPAF DDLHIDVVADRPRKQEPAAQDEAEGETDKTGEPAGDDIEAQKTVDGNAVDTEPAEEAAGDGTSQSQSAGDESVAQNASDS VVDVDAADSSDESKSDADDEATEEDILNNTVADDDEDDEMDDEEDNVRPSDDVTPELETVIDLIEQLRQNRADEE >Mature_394_residues TDTTETIVTPDPHAIARAVLLEVADESDQVGDFVTSYDLEDHVTDFRFAANIRGYEGWQWSVTLYHDEEIDSWTVSESSL IPTEGALMPPKWIPWKDRLEPTDLAPTDSIGTDPDDERIEEGEVEESSLQDVNDAVEAFRLTRRHVLTSLGRAQAAKRWY EGPRGPKALSTKTAEGNLCSTCGFFVPLAGELDRMFGVCANKWSPDDGRVVSLDHGCGEHSEIEPPEPSQLWVQSKPAFD DLHIDVVADRPRKQEPAAQDEAEGETDKTGEPAGDDIEAQKTVDGNAVDTEPAEEAAGDGTSQSQSAGDESVAQNASDSV VDVDAADSSDESKSDADDEATEEDILNNTVADDDEDDEMDDEEDNVRPSDDVTPELETVIDLIEQLRQNRADEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021391 [H]
Pfam domain/function: PF11228 DUF3027 [H]
EC number: NA
Molecular weight: Translated: 43282; Mature: 43151
Theoretical pI: Translated: 3.73; Mature: 3.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDTTETIVTPDPHAIARAVLLEVADESDQVGDFVTSYDLEDHVTDFRFAANIRGYEGWQ CCCCCCEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEE WSVTLYHDEEIDSWTVSESSLIPTEGALMPPKWIPWKDRLEPTDLAPTDSIGTDPDDERI EEEEEEECCCCCCEECCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCHHHH EEGEVEESSLQDVNDAVEAFRLTRRHVLTSLGRAQAAKRWYEGPRGPKALSTKTAEGNLC HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCH STCGFFVPLAGELDRMFGVCANKWSPDDGRVVSLDHGCGEHSEIEPPEPSQLWVQSKPAF HHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEECCCCC DDLHIDVVADRPRKQEPAAQDEAEGETDKTGEPAGDDIEAQKTVDGNAVDTEPAEEAAGD CCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHCCC GTSQSQSAGDESVAQNASDSVVDVDAADSSDESKSDADDEATEEDILNNTVADDDEDDEM CCCCHHCCCHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC DDEEDNVRPSDDVTPELETVIDLIEQLRQNRADEE CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TDTTETIVTPDPHAIARAVLLEVADESDQVGDFVTSYDLEDHVTDFRFAANIRGYEGWQ CCCCCEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEE WSVTLYHDEEIDSWTVSESSLIPTEGALMPPKWIPWKDRLEPTDLAPTDSIGTDPDDERI EEEEEEECCCCCCEECCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCHHHH EEGEVEESSLQDVNDAVEAFRLTRRHVLTSLGRAQAAKRWYEGPRGPKALSTKTAEGNLC HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCH STCGFFVPLAGELDRMFGVCANKWSPDDGRVVSLDHGCGEHSEIEPPEPSQLWVQSKPAF HHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEECCCCC DDLHIDVVADRPRKQEPAAQDEAEGETDKTGEPAGDDIEAQKTVDGNAVDTEPAEEAAGD CCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHCCC GTSQSQSAGDESVAQNASDSVVDVDAADSSDESKSDADDEATEEDILNNTVADDDEDDEM CCCCHHCCCHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC DDEEDNVRPSDDVTPELETVIDLIEQLRQNRADEE CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]