Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

Click here to switch to the map view.

The map label for this gene is 213691585

Identifier: 213691585

GI number: 213691585

Start: 791906

End: 792856

Strand: Reverse

Name: 213691585

Synonym: Blon_0689

Alternate gene names: NA

Gene position: 792856-791906 (Counterclockwise)

Preceding gene: 213691586

Following gene: 213691584

Centisome position: 27.99

GC content: 60.88

Gene sequence:

>951_bases
GTGAGTTCCGATTCCGTTCGCAAGAAGATCGAGGCCCTTGGCACTCAGCTGAGCCTGCCTACAGTAAGGAAGGCTTTGGG
CGTGCTGGAGGGCGAACACGCATCCGGGCGTCGTGGCGGCAGCGGCGATGCGATGGATGTGCATGCCTATGAGCCAGGTG
ACGAATCCCGTCTTATCGATTGGAAGACCAGCGCCCGCCAAGGCCGCCCCATGGTGGTCGAGCGCGAGCGCCTGTCGACG
TCACGGGTCTGGTTGCTGATGGACGTTGGCCTGGAGATGACTGGCGTATGCCCTTCCGGAGAACGCGCATGGCAGGTTGC
CGCCAATGCGCTGCGAATGTTCGCCGCCCTGTCATTGCGCCGGTCGGACGATATTTCGCTGGTGTTCGGCGATGAGTCCA
GCATCACCCGCGTGCCGTTCAACGGTGGGTTCGCACAGTTCGAACGCACGCTGGACAAGGCGCTTGACCGTGATTGGGAT
CATCACCGTAATATCGACGCACTGCTGGAATATGCGCGCCGTATCAAGGATCGCGAGGCATTGATCGTATTGGCCACCGA
TGAGCATGCGATGGAGGAGCGGCATATCACCACGATCCGTCGTATTACCCGCACCCATCCGATGGTGCTGATCGATGTGG
CGACGATGAATCCGTTCAAGGCCGTCTCATCCCGTCACGCTCCCACCGATGGCTTGAGTGCACGGCGTGTGCCGGCATTC
CTGTGCAACGCCAAGGCAGCGGCCGAGGTCGATACTCATCGCGCGTATATGGCCGCGGCTTTGGAACAGGAGCTCACCCG
TGCCGGTTCCCATATCATTCGAGCCGCGTCCAGCGAATCCATGTTCGATCGTTTCGTCGCCCTGGTGTCCCGGGCATTGG
CCCGCACCACACGCAATAGACTGGGCACTGCACCCGAACTGGTCGGACTGACTTTGGCGGGTGATCTATGA

Upstream 100 bases:

>100_bases
AGGTGCTGCGCCACCGTATTATGCTGACGTTCGAGGCACTGGCCGATGGCGTGGTCAGCGATCAGATCGCCGACAAGATC
GTCGAAACGGTTCCTGTTCC

Downstream 100 bases:

>100_bases
TGCACAGCATGTTCCCCATCATCCCGCTCGCCACTGATCCCGGCGATCTCAGGCCCGTGGAGTCGTTGGCCTTGACCACT
CCCCTGGTGATGGCCATCGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 316; Mature: 315

Protein sequence:

>316_residues
MSSDSVRKKIEALGTQLSLPTVRKALGVLEGEHASGRRGGSGDAMDVHAYEPGDESRLIDWKTSARQGRPMVVERERLST
SRVWLLMDVGLEMTGVCPSGERAWQVAANALRMFAALSLRRSDDISLVFGDESSITRVPFNGGFAQFERTLDKALDRDWD
HHRNIDALLEYARRIKDREALIVLATDEHAMEERHITTIRRITRTHPMVLIDVATMNPFKAVSSRHAPTDGLSARRVPAF
LCNAKAAAEVDTHRAYMAAALEQELTRAGSHIIRAASSESMFDRFVALVSRALARTTRNRLGTAPELVGLTLAGDL

Sequences:

>Translated_316_residues
MSSDSVRKKIEALGTQLSLPTVRKALGVLEGEHASGRRGGSGDAMDVHAYEPGDESRLIDWKTSARQGRPMVVERERLST
SRVWLLMDVGLEMTGVCPSGERAWQVAANALRMFAALSLRRSDDISLVFGDESSITRVPFNGGFAQFERTLDKALDRDWD
HHRNIDALLEYARRIKDREALIVLATDEHAMEERHITTIRRITRTHPMVLIDVATMNPFKAVSSRHAPTDGLSARRVPAF
LCNAKAAAEVDTHRAYMAAALEQELTRAGSHIIRAASSESMFDRFVALVSRALARTTRNRLGTAPELVGLTLAGDL
>Mature_315_residues
SSDSVRKKIEALGTQLSLPTVRKALGVLEGEHASGRRGGSGDAMDVHAYEPGDESRLIDWKTSARQGRPMVVERERLSTS
RVWLLMDVGLEMTGVCPSGERAWQVAANALRMFAALSLRRSDDISLVFGDESSITRVPFNGGFAQFERTLDKALDRDWDH
HRNIDALLEYARRIKDREALIVLATDEHAMEERHITTIRRITRTHPMVLIDVATMNPFKAVSSRHAPTDGLSARRVPAFL
CNAKAAAEVDTHRAYMAAALEQELTRAGSHIIRAASSESMFDRFVALVSRALARTTRNRLGTAPELVGLTLAGDL

Specific function: Unknown

COG id: COG1721

COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34941; Mature: 34810

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSDSVRKKIEALGTQLSLPTVRKALGVLEGEHASGRRGGSGDAMDVHAYEPGDESRLID
CCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCEEEE
WKTSARQGRPMVVERERLSTSRVWLLMDVGLEMTGVCPSGERAWQVAANALRMFAALSLR
ECCCCCCCCCCEEEHHHCCCCEEEEEEECCCEEECCCCCCHHHHHHHHHHHHHHHHHHHC
RSDDISLVFGDESSITRVPFNGGFAQFERTLDKALDRDWDHHRNIDALLEYARRIKDREA
CCCCEEEEECCCCCEEECCCCCCHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHCCCCCE
LIVLATDEHAMEERHITTIRRITRTHPMVLIDVATMNPFKAVSSRHAPTDGLSARRVPAF
EEEEECCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCCCCCCCCCCCHHH
LCNAKAAAEVDTHRAYMAAALEQELTRAGSHIIRAASSESMFDRFVALVSRALARTTRNR
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
LGTAPELVGLTLAGDL
CCCCHHHEEEEEECCC
>Mature Secondary Structure 
SSDSVRKKIEALGTQLSLPTVRKALGVLEGEHASGRRGGSGDAMDVHAYEPGDESRLID
CCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCEEEE
WKTSARQGRPMVVERERLSTSRVWLLMDVGLEMTGVCPSGERAWQVAANALRMFAALSLR
ECCCCCCCCCCEEEHHHCCCCEEEEEEECCCEEECCCCCCHHHHHHHHHHHHHHHHHHHC
RSDDISLVFGDESSITRVPFNGGFAQFERTLDKALDRDWDHHRNIDALLEYARRIKDREA
CCCCEEEEECCCCCEEECCCCCCHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHCCCCCE
LIVLATDEHAMEERHITTIRRITRTHPMVLIDVATMNPFKAVSSRHAPTDGLSARRVPAF
EEEEECCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCCCCCCCCCCCHHH
LCNAKAAAEVDTHRAYMAAALEQELTRAGSHIIRAASSESMFDRFVALVSRALARTTRNR
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
LGTAPELVGLTLAGDL
CCCCHHHEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA