| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is yeaC [H]
Identifier: 213691586
GI number: 213691586
Start: 792853
End: 793932
Strand: Reverse
Name: yeaC [H]
Synonym: Blon_0690
Alternate gene names: 213691586
Gene position: 793932-792853 (Counterclockwise)
Preceding gene: 213691587
Following gene: 213691585
Centisome position: 28.03
GC content: 61.57
Gene sequence:
>1080_bases ATGACTTTGTTCCCCACGCAACCGAACATACCTTCGCAGACCACCGCCGCACGACCGGTCACCGTTCCCGCGCCCGGCGT GTCGGCTCAGCTGGGTGCCGATGACGCCAAGCGCGCACGTATCCTGGCCGACATCATTCGGGCGAGATTCGCCCAGACAC TGGTGGGTCAGGATAATCTGCGCGAATCGCTTATCGTGACCTTGGTGGCCGGCGGGCATATTCTTATCGAATCCGTGCCG GGCTTGGCCAAGACCACGGCCGCCCAGACACTAGCCACCTGCGTATCCGGCTCGTTCAAACGCGTGCAGTGCACTCCTGA TCTCATGCCATCCGATCTGGTGGGCACGCAGGTCTTCGATTTTGCGTCGCAGAAGTTCACCACGCAGATCGGCCCGATTC ACGCCAATTTCGTACTGCTGGACGAGATCAACCGCTCGAATGCCAAAACCCAGTCCGCCATGCTTGAGGCCATGGCCGAG GGTGCCACGACCGTCGGCGGGCAGCGTATCGCCTTGCCCAAGCCGTTCATGGTGATCGCCACCGAGAATCCGATTGAGGA GGAGGGCACGTTCAACCTGCCCGAAGCCCAGATGGATCGTTTCATGATGAAGGCCGTCATGACCTATCCTTCGCCCGACG AAGAGGCTCGGATGCTGGCCATGCTCACCCGCCGTGGCTCCGACATGATCGGTCCCGACACCATCACCGGCGAACGCATT TCCGTGTCCGACGTTGATTTTTTGCGCAAGGCGGCACGCCGCGTGCATGTTTCCGACGCGATCATGCGTTATGCGGTCGA TATCACCGCCACGTCACGAGGTGCCGGCTCCCGCCCCATCAAGGGACTGTCATCCTTGGTGCGTTTGGGTGCCTCGCCGC GCGCCACCATCGCCTTGACCCGCATCGGCCAGGCGAAGGCATTGCTGTCCGGGCGCGACTATGTGGTGCCCGAGGATCTC AAGGCGTTCGCTCATGAGGTGCTGCGCCACCGTATTATGCTGACGTTCGAGGCACTGGCCGATGGCGTGGTCAGCGATCA GATCGCCGACAAGATCGTCGAAACGGTTCCTGTTCCGTGA
Upstream 100 bases:
>100_bases TCTCCAGAGCCAATCAAGCCCTAGTCACCATGGGTGCCGAACCGGTGGATTGGACTCTTTAGACAGACCAACAGTCATTG TAAGTAGTTACAGTGGGGAC
Downstream 100 bases:
>100_bases GTTCCGATTCCGTTCGCAAGAAGATCGAGGCCCTTGGCACTCAGCTGAGCCTGCCTACAGTAAGGAAGGCTTTGGGCGTG CTGGAGGGCGAACACGCATC
Product: ATPase associated with various cellular activities, AAA_3
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 359; Mature: 358
Protein sequence:
>359_residues MTLFPTQPNIPSQTTAARPVTVPAPGVSAQLGADDAKRARILADIIRARFAQTLVGQDNLRESLIVTLVAGGHILIESVP GLAKTTAAQTLATCVSGSFKRVQCTPDLMPSDLVGTQVFDFASQKFTTQIGPIHANFVLLDEINRSNAKTQSAMLEAMAE GATTVGGQRIALPKPFMVIATENPIEEEGTFNLPEAQMDRFMMKAVMTYPSPDEEARMLAMLTRRGSDMIGPDTITGERI SVSDVDFLRKAARRVHVSDAIMRYAVDITATSRGAGSRPIKGLSSLVRLGASPRATIALTRIGQAKALLSGRDYVVPEDL KAFAHEVLRHRIMLTFEALADGVVSDQIADKIVETVPVP
Sequences:
>Translated_359_residues MTLFPTQPNIPSQTTAARPVTVPAPGVSAQLGADDAKRARILADIIRARFAQTLVGQDNLRESLIVTLVAGGHILIESVP GLAKTTAAQTLATCVSGSFKRVQCTPDLMPSDLVGTQVFDFASQKFTTQIGPIHANFVLLDEINRSNAKTQSAMLEAMAE GATTVGGQRIALPKPFMVIATENPIEEEGTFNLPEAQMDRFMMKAVMTYPSPDEEARMLAMLTRRGSDMIGPDTITGERI SVSDVDFLRKAARRVHVSDAIMRYAVDITATSRGAGSRPIKGLSSLVRLGASPRATIALTRIGQAKALLSGRDYVVPEDL KAFAHEVLRHRIMLTFEALADGVVSDQIADKIVETVPVP >Mature_358_residues TLFPTQPNIPSQTTAARPVTVPAPGVSAQLGADDAKRARILADIIRARFAQTLVGQDNLRESLIVTLVAGGHILIESVPG LAKTTAAQTLATCVSGSFKRVQCTPDLMPSDLVGTQVFDFASQKFTTQIGPIHANFVLLDEINRSNAKTQSAMLEAMAEG ATTVGGQRIALPKPFMVIATENPIEEEGTFNLPEAQMDRFMMKAVMTYPSPDEEARMLAMLTRRGSDMIGPDTITGERIS VSDVDFLRKAARRVHVSDAIMRYAVDITATSRGAGSRPIKGLSSLVRLGASPRATIALTRIGQAKALLSGRDYVVPEDLK AFAHEVLRHRIMLTFEALADGVVSDQIADKIVETVPVP
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the moxR family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011703 - InterPro: IPR016366 [H]
Pfam domain/function: PF07726 AAA_3 [H]
EC number: NA
Molecular weight: Translated: 38592; Mature: 38461
Theoretical pI: Translated: 7.63; Mature: 7.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLFPTQPNIPSQTTAARPVTVPAPGVSAQLGADDAKRARILADIIRARFAQTLVGQDNL CCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHH RESLIVTLVAGGHILIESVPGLAKTTAAQTLATCVSGSFKRVQCTPDLMPSDLVGTQVFD HHHEEEEEEECCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHH FASQKFTTQIGPIHANFVLLDEINRSNAKTQSAMLEAMAEGATTVGGQRIALPKPFMVIA HHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCEEECCCCEEEEE TENPIEEEGTFNLPEAQMDRFMMKAVMTYPSPDEEARMLAMLTRRGSDMIGPDTITGERI ECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEE SVSDVDFLRKAARRVHVSDAIMRYAVDITATSRGAGSRPIKGLSSLVRLGASPRATIALT ECHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHCCCCCCCEEEEE RIGQAKALLSGRDYVVPEDLKAFAHEVLRHRIMLTFEALADGVVSDQIADKIVETVPVP ECCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure TLFPTQPNIPSQTTAARPVTVPAPGVSAQLGADDAKRARILADIIRARFAQTLVGQDNL CCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHH RESLIVTLVAGGHILIESVPGLAKTTAAQTLATCVSGSFKRVQCTPDLMPSDLVGTQVFD HHHEEEEEEECCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHH FASQKFTTQIGPIHANFVLLDEINRSNAKTQSAMLEAMAEGATTVGGQRIALPKPFMVIA HHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCEEECCCCEEEEE TENPIEEEGTFNLPEAQMDRFMMKAVMTYPSPDEEARMLAMLTRRGSDMIGPDTITGERI ECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEE SVSDVDFLRKAARRVHVSDAIMRYAVDITATSRGAGSRPIKGLSSLVRLGASPRATIALT ECHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHCCCCCCCEEEEE RIGQAKALLSGRDYVVPEDLKAFAHEVLRHRIMLTFEALADGVVSDQIADKIVETVPVP ECCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969499; 9384377 [H]