Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is 213691557

Identifier: 213691557

GI number: 213691557

Start: 761267

End: 761659

Strand: Reverse

Name: 213691557

Synonym: Blon_0658

Alternate gene names: NA

Gene position: 761659-761267 (Counterclockwise)

Preceding gene: 213691558

Following gene: 213691551

Centisome position: 26.89

GC content: 62.6

Gene sequence:

>393_bases
ATGCCCAAGGAAATCATACAGTTCGATCAGGCCATGTTCGAGTCCAGGCTCGACCGGATGGTGCGCAAGAAGGTCGAGCA
AACCATCGACCTGATGCTTGACGCGGAGGTCGACGAAATCGCCAACGCCGCCAGATACGAGAGAAGCGGCGACAGGAAGG
CCTTCCGCGCCGGCCACTACGACCGCCACCTGACCGCCAAGGCCGGCAAGCTGAACCTTCGGGTCCCGAAGCTGAAGGGC
GAGGTGTTCCGCAGCCAGGTGATCGAGCGCTGCCGGCGACGTGAGGAAAGCGTCGAGGAGGCGCTCATGGAGATGTACAT
GGCCGGCGTCTCCACGCGCCGCGTGGACGACATCAGCCAACTTCTGTGGGGCGACGGTAGTGCCCGTGAATAA

Upstream 100 bases:

>100_bases
GATTCGGTTGTGAGTTCCGATGAAAAGGACATGGCCCGGCTTTGGTACGATTTTCAGTCGCTTACACATGAAAACCGCGA
ATGGAAAGAGGCCGGGAACC

Downstream 100 bases:

>100_bases
GTTAGGTCATCTTTATCGTAAGGCGAAGTACAGAGACAGTGGCCCGTTTCTCAAGACACACCGTAACAAATATAGCGGCT
GGAAGTCCAGCCGCTATAAG

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 129

Protein sequence:

>130_residues
MPKEIIQFDQAMFESRLDRMVRKKVEQTIDLMLDAEVDEIANAARYERSGDRKAFRAGHYDRHLTAKAGKLNLRVPKLKG
EVFRSQVIERCRRREESVEEALMEMYMAGVSTRRVDDISQLLWGDGSARE

Sequences:

>Translated_130_residues
MPKEIIQFDQAMFESRLDRMVRKKVEQTIDLMLDAEVDEIANAARYERSGDRKAFRAGHYDRHLTAKAGKLNLRVPKLKG
EVFRSQVIERCRRREESVEEALMEMYMAGVSTRRVDDISQLLWGDGSARE
>Mature_129_residues
PKEIIQFDQAMFESRLDRMVRKKVEQTIDLMLDAEVDEIANAARYERSGDRKAFRAGHYDRHLTAKAGKLNLRVPKLKGE
VFRSQVIERCRRREESVEEALMEMYMAGVSTRRVDDISQLLWGDGSARE

Specific function: Required for the transposition of the insertion element [H]

COG id: COG3328

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase mutator family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001207 [H]

Pfam domain/function: PF00872 Transposase_mut [H]

EC number: NA

Molecular weight: Translated: 15149; Mature: 15017

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKEIIQFDQAMFESRLDRMVRKKVEQTIDLMLDAEVDEIANAARYERSGDRKAFRAGHY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHCCCC
DRHLTAKAGKLNLRVPKLKGEVFRSQVIERCRRREESVEEALMEMYMAGVSTRRVDDISQ
HHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
LLWGDGSARE
HHHCCCCCCC
>Mature Secondary Structure 
PKEIIQFDQAMFESRLDRMVRKKVEQTIDLMLDAEVDEIANAARYERSGDRKAFRAGHY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHCCCC
DRHLTAKAGKLNLRVPKLKGEVFRSQVIERCRRREESVEEALMEMYMAGVSTRRVDDISQ
HHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
LLWGDGSARE
HHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7768811; 11481430 [H]