| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691558
Identifier: 213691558
GI number: 213691558
Start: 761781
End: 762269
Strand: Reverse
Name: 213691558
Synonym: Blon_0659
Alternate gene names: NA
Gene position: 762269-761781 (Counterclockwise)
Preceding gene: 213691559
Following gene: 213691557
Centisome position: 26.91
GC content: 66.26
Gene sequence:
>489_bases ATGTTCAGTCTTGAGGAACGAGAGCGTGCGGTGGGCCTGTATTTCACCACGCCGATGACCACGGCCCAGGTGGTGGAGCA CCTGGGTTATCCGACCAGGCAGTGCCCGGAACGCCGGCTGGCAAAGGATCCCCGGTATGCTGGCCATATGGCCAAACCCA TCATCCCCCTGGAGACACGGCTGAAGGCGATCGAACCGGTGCTGGGCGGCATACAGCAGAAACAGGCCGCCGAACGGCTC GGCGCGGGCGTCGGCGCGGTGCATGGCTGGGTCAGGGCGTACCGCAAGGGCGGCATGGCCGCGTTGCGGCCCCAAAACGG GAACGCCGCGCAGGGCAATAAGCCCGCGGACCCCCGTCGCCGGCCGTCCGCAACCGATGATGATGACGCGGAGGCTTTGC GTCGCAGGGTCGAGGAGCTGGAGTTGGAGAACGCGTTGATGCGGGAGGTGGCGGAGGTCCGTAGAAAAAGACCCAGGCGC CGACCTTGA
Upstream 100 bases:
>100_bases GGTATGCGATCGCAAGTGTGTCTGTTCAATAGAAGTTAGGCCGAATGCGGGATAAGGGGCTGCGAACGTTTTCTTGGAGA CTGAGCGAAAGGTTTTTCGT
Downstream 100 bases:
>100_bases TAACGCCCGTCTTCTTGCGCAGATTCGGTTGTGAGTTCCGATGAAAAGGACATGGCCCGGCTTTGGTACGATTTTCAGTC GCTTACACATGAAAACCGCG
Product: IS3 family transposase
Products: NA
Alternate protein names: Transposase
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MFSLEERERAVGLYFTTPMTTAQVVEHLGYPTRQCPERRLAKDPRYAGHMAKPIIPLETRLKAIEPVLGGIQQKQAAERL GAGVGAVHGWVRAYRKGGMAALRPQNGNAAQGNKPADPRRRPSATDDDDAEALRRRVEELELENALMREVAEVRRKRPRR RP
Sequences:
>Translated_162_residues MFSLEERERAVGLYFTTPMTTAQVVEHLGYPTRQCPERRLAKDPRYAGHMAKPIIPLETRLKAIEPVLGGIQQKQAAERL GAGVGAVHGWVRAYRKGGMAALRPQNGNAAQGNKPADPRRRPSATDDDDAEALRRRVEELELENALMREVAEVRRKRPRR RP >Mature_162_residues MFSLEERERAVGLYFTTPMTTAQVVEHLGYPTRQCPERRLAKDPRYAGHMAKPIIPLETRLKAIEPVLGGIQQKQAAERL GAGVGAVHGWVRAYRKGGMAALRPQNGNAAQGNKPADPRRRPSATDDDDAEALRRRVEELELENALMREVAEVRRKRPRR RP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18242; Mature: 18242
Theoretical pI: Translated: 10.91; Mature: 10.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSLEERERAVGLYFTTPMTTAQVVEHLGYPTRQCPERRLAKDPRYAGHMAKPIIPLETR CCCCHHHHHHCCEEEECCCCHHHHHHHCCCCCCCCHHHHHHCCCCHHHHHHCCCCCHHHH LKAIEPVLGGIQQKQAAERLGAGVGAVHGWVRAYRKGGMAALRPQNGNAAQGNKPADPRR HHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCC RPSATDDDDAEALRRRVEELELENALMREVAEVRRKRPRRRP CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MFSLEERERAVGLYFTTPMTTAQVVEHLGYPTRQCPERRLAKDPRYAGHMAKPIIPLETR CCCCHHHHHHCCEEEECCCCHHHHHHHCCCCCCCCHHHHHHCCCCHHHHHHCCCCCHHHH LKAIEPVLGGIQQKQAAERLGAGVGAVHGWVRAYRKGGMAALRPQNGNAAQGNKPADPRR HHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCC RPSATDDDDAEALRRRVEELELENALMREVAEVRRKRPRRRP CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA