| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
Click here to switch to the map view.
The map label for this gene is 213691531
Identifier: 213691531
GI number: 213691531
Start: 724746
End: 725570
Strand: Direct
Name: 213691531
Synonym: Blon_0632
Alternate gene names: NA
Gene position: 724746-725570 (Clockwise)
Preceding gene: 213691530
Following gene: 213691532
Centisome position: 25.58
GC content: 54.18
Gene sequence:
>825_bases ATGAGTAGCGGCCGCGGCAACCATGGCACGTCGCTGCTCGGCCGCATCGCGAACCGTGTCGGCGAAGAGCTTTCCGTTCC GCCGCGCACGGCCAAGGAACGGTTCCGTCATGAGCTCAAATATCTGATCTCATACGCGCAAAAAGCCGATTTGAATGTGC GCATGGCACCGCTGCTTGGCCTTGACAAGCATGCGGGTAATGGCGGCTATATGATTCGCAGCCTGTACTTCGACGATTAT TGGAACACCGCGTATCAGGAAAAAGTCGACGGTGTGCTGCTGCGCAAGAAATACCGTATTCGCATCTACGATTACAGCGA CCGCGTGATCAAACTGGAACGCAAACGCAAAAGCGACAGTTGGATTTACAAGGAGGATGCGCCGCTCACCCATGAGCAGT TCGACCGCATTCTTGCCGGCGATTACGAGTTTTTGCGCGACAGCGAGCATCAATTGTGCCGCGAGTTTTATGTGGAATGC ATGTGCAATGTGTTGCGTCCGCGTGTGATCGTCGATTATGAGCGCGAACCGTGGATTCTTGACGCTGGTACCGTGCGTGT CACTTTCGATATGAATGTGCGTGCGGCGGTTGGAGGATTCGATATTTTCGACTCCACACTGCCGGTATTGCCCGTGCTTG AGCCTGGAAAACTGGTGATGGAAGTCAAATTCACTGAATTCCTGCCGCAGATGGTACGCGATCTGTTGCCGGGCAAAGCT CAGGAGTTGACGTCGGCTTCGAAATACGTGCTCTGTTATGACAAAGCCTCGTATTTGCGGGGATTCGGCTACTGGCAGGA AGGTTGGAGCGTGCCGAGCCTGTAA
Upstream 100 bases:
>100_bases ACACAAGACGCGTTCGACCATTACATCACCGACGGCAACAAGATTTACGGCACCAAATGCTTCTATGTGAAAGCCGACGG CAGCATTGTGGAGGATGCCA
Downstream 100 bases:
>100_bases AGCCGAGCCTGTAATCAGCTGACATTTCGGCTGGCGTATCCCGAAACAATACACGTTACGAATCAAGGAAGTAACAGAGA AAGAGCAGCGTTATGAGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MSSGRGNHGTSLLGRIANRVGEELSVPPRTAKERFRHELKYLISYAQKADLNVRMAPLLGLDKHAGNGGYMIRSLYFDDY WNTAYQEKVDGVLLRKKYRIRIYDYSDRVIKLERKRKSDSWIYKEDAPLTHEQFDRILAGDYEFLRDSEHQLCREFYVEC MCNVLRPRVIVDYEREPWILDAGTVRVTFDMNVRAAVGGFDIFDSTLPVLPVLEPGKLVMEVKFTEFLPQMVRDLLPGKA QELTSASKYVLCYDKASYLRGFGYWQEGWSVPSL
Sequences:
>Translated_274_residues MSSGRGNHGTSLLGRIANRVGEELSVPPRTAKERFRHELKYLISYAQKADLNVRMAPLLGLDKHAGNGGYMIRSLYFDDY WNTAYQEKVDGVLLRKKYRIRIYDYSDRVIKLERKRKSDSWIYKEDAPLTHEQFDRILAGDYEFLRDSEHQLCREFYVEC MCNVLRPRVIVDYEREPWILDAGTVRVTFDMNVRAAVGGFDIFDSTLPVLPVLEPGKLVMEVKFTEFLPQMVRDLLPGKA QELTSASKYVLCYDKASYLRGFGYWQEGWSVPSL >Mature_273_residues SSGRGNHGTSLLGRIANRVGEELSVPPRTAKERFRHELKYLISYAQKADLNVRMAPLLGLDKHAGNGGYMIRSLYFDDYW NTAYQEKVDGVLLRKKYRIRIYDYSDRVIKLERKRKSDSWIYKEDAPLTHEQFDRILAGDYEFLRDSEHQLCREFYVECM CNVLRPRVIVDYEREPWILDAGTVRVTFDMNVRAAVGGFDIFDSTLPVLPVLEPGKLVMEVKFTEFLPQMVRDLLPGKAQ ELTSASKYVLCYDKASYLRGFGYWQEGWSVPSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31834; Mature: 31703
Theoretical pI: Translated: 8.27; Mature: 8.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSGRGNHGTSLLGRIANRVGEELSVPPRTAKERFRHELKYLISYAQKADLNVRMAPLLG CCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECEEC LDKHAGNGGYMIRSLYFDDYWNTAYQEKVDGVLLRKKYRIRIYDYSDRVIKLERKRKSDS CCCCCCCCCEEEEEEEHHHHHCHHHHHHHHHHEEEEEEEEEEEECCCCEEEEEHHCCCCC WIYKEDAPLTHEQFDRILAGDYEFLRDSEHQLCREFYVECMCNVLRPRVIVDYEREPWIL EEEECCCCCCHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEE DAGTVRVTFDMNVRAAVGGFDIFDSTLPVLPVLEPGKLVMEVKFTEFLPQMVRDLLPGKA ECCEEEEEEECCEEEEECCCHHHCCCCCCCEEECCCCEEEEEHHHHHHHHHHHHHCCCCH QELTSASKYVLCYDKASYLRGFGYWQEGWSVPSL HHHHCCCCEEEEECCHHHHHHCCCHHCCCCCCCC >Mature Secondary Structure SSGRGNHGTSLLGRIANRVGEELSVPPRTAKERFRHELKYLISYAQKADLNVRMAPLLG CCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECEEC LDKHAGNGGYMIRSLYFDDYWNTAYQEKVDGVLLRKKYRIRIYDYSDRVIKLERKRKSDS CCCCCCCCCEEEEEEEHHHHHCHHHHHHHHHHEEEEEEEEEEEECCCCEEEEEHHCCCCC WIYKEDAPLTHEQFDRILAGDYEFLRDSEHQLCREFYVECMCNVLRPRVIVDYEREPWIL EEEECCCCCCHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEE DAGTVRVTFDMNVRAAVGGFDIFDSTLPVLPVLEPGKLVMEVKFTEFLPQMVRDLLPGKA ECCEEEEEEECCEEEEECCCHHHCCCCCCCEEECCCCEEEEEHHHHHHHHHHHHHCCCCH QELTSASKYVLCYDKASYLRGFGYWQEGWSVPSL HHHHCCCCEEEEECCHHHHHHCCCHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA