| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691526
Identifier: 213691526
GI number: 213691526
Start: 717195
End: 718109
Strand: Direct
Name: 213691526
Synonym: Blon_0627
Alternate gene names: NA
Gene position: 717195-718109 (Clockwise)
Preceding gene: 213691525
Following gene: 213691527
Centisome position: 25.32
GC content: 53.88
Gene sequence:
>915_bases ATGAATGCGACGGTGATGGCGATGCTGCTTATCGCCGTGCATGTAATGATATGCGTGCTGCTGTGCGTATTGTCTCGTGT TGGCGTGCTTCGTGTGGAGGGGCGACTGCTTCCTTTCATGCTGCTGGTGCCATTGTGGGGGCCGTTATGTGTGCTGTTGC TGCATGCGAGCACGCTGATTCGCTCTGGCGAGCACACGGTTCCGGGGCTTGAGCAAATGCGTGTGGATGATGAGGAGCGT CGAAGCATTCTCGTTGGGGAACGAGCCGATTTCGCCAATACAGTGCCGTTGGAAGAGGCGTTGATCGTCAATGATTCGAG TCAGCGGCGCAGTCTGGTGATGTCCATTCTCAACGATAATCCCAGCCGTTATATCGATGTGCTGTCGCAGGCCCGACTGA ATGAGGATGTGGAAGTCGTGCATTACGCGGCTACCGCCTTGGCGCAGATCAGTGCCAAGGAAGATCTTGCATTGCAGCGC TGCCGTAACGATTATCTGCAGCATCGAAATTCCGAAACGATGTTGGAACGGTATTGCGATGCGCTGGAACGATATGTCAA TTCCGGTATTGCGCAAGGATACGCTTTGCAGTTGCAGAAACAACGATATGCCGAAGTGTTGCAGGAACGACTTCGCCAAC ATGGCGATTATCACGTTGCGTGCCGTCTTGCGCAAATGCAGATTGATCTTGGACTTTTTGATGATGCCGCACACACCGTT GACGGCGCTATGGAACGGTGGCCGGATCAAGGCGATGTATGGCTGATGCGTCTGCGACTCGATGCCGCACGCAATGATGG CGATGCGTTGCATCAAACCGTTCAGCAGATCGAAAGCAAACATATTTATCTCGGTGGCCAGGGAAGACGAGCTCTGCGGT TCTGGACTGGAACCAAGGAGGTTGAACGCGCATGA
Upstream 100 bases:
>100_bases CTGAGGCTTCGGAACAAGTAGCTGCCGAGTCGCAAGCGGATGAAACGCCGCGCAGTGACGCTGCGCCGAATGACTCCGCA TCGCATGAAGGTGGCGCAGC
Downstream 100 bases:
>100_bases CCAGAGGATTCCTGTCAGACGTGTTGGCCAAGTGGAAGCGATTCCGCTGGCAAGGTCTGGTCAAAGTCTGGGCCATGTTC ATGGCCATCGCTTTGGTGTT
Product: membrane protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 304; Mature: 304
Protein sequence:
>304_residues MNATVMAMLLIAVHVMICVLLCVLSRVGVLRVEGRLLPFMLLVPLWGPLCVLLLHASTLIRSGEHTVPGLEQMRVDDEER RSILVGERADFANTVPLEEALIVNDSSQRRSLVMSILNDNPSRYIDVLSQARLNEDVEVVHYAATALAQISAKEDLALQR CRNDYLQHRNSETMLERYCDALERYVNSGIAQGYALQLQKQRYAEVLQERLRQHGDYHVACRLAQMQIDLGLFDDAAHTV DGAMERWPDQGDVWLMRLRLDAARNDGDALHQTVQQIESKHIYLGGQGRRALRFWTGTKEVERA
Sequences:
>Translated_304_residues MNATVMAMLLIAVHVMICVLLCVLSRVGVLRVEGRLLPFMLLVPLWGPLCVLLLHASTLIRSGEHTVPGLEQMRVDDEER RSILVGERADFANTVPLEEALIVNDSSQRRSLVMSILNDNPSRYIDVLSQARLNEDVEVVHYAATALAQISAKEDLALQR CRNDYLQHRNSETMLERYCDALERYVNSGIAQGYALQLQKQRYAEVLQERLRQHGDYHVACRLAQMQIDLGLFDDAAHTV DGAMERWPDQGDVWLMRLRLDAARNDGDALHQTVQQIESKHIYLGGQGRRALRFWTGTKEVERA >Mature_304_residues MNATVMAMLLIAVHVMICVLLCVLSRVGVLRVEGRLLPFMLLVPLWGPLCVLLLHASTLIRSGEHTVPGLEQMRVDDEER RSILVGERADFANTVPLEEALIVNDSSQRRSLVMSILNDNPSRYIDVLSQARLNEDVEVVHYAATALAQISAKEDLALQR CRNDYLQHRNSETMLERYCDALERYVNSGIAQGYALQLQKQRYAEVLQERLRQHGDYHVACRLAQMQIDLGLFDDAAHTV DGAMERWPDQGDVWLMRLRLDAARNDGDALHQTVQQIESKHIYLGGQGRRALRFWTGTKEVERA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34526; Mature: 34526
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNATVMAMLLIAVHVMICVLLCVLSRVGVLRVEGRLLPFMLLVPLWGPLCVLLLHASTLI CCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH RSGEHTVPGLEQMRVDDEERRSILVGERADFANTVPLEEALIVNDSSQRRSLVMSILNDN HCCCCCCCCHHHHCCCCHHHHHEEECCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCC PSRYIDVLSQARLNEDVEVVHYAATALAQISAKEDLALQRCRNDYLQHRNSETMLERYCD HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH ALERYVNSGIAQGYALQLQKQRYAEVLQERLRQHGDYHVACRLAQMQIDLGLFDDAAHTV HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHCCCCCCCCHHHHH DGAMERWPDQGDVWLMRLRLDAARNDGDALHQTVQQIESKHIYLGGQGRRALRFWTGTKE HHHHHHCCCCCCEEEEEEEHHHCCCCCHHHHHHHHHHHHCEEEECCCCCEEEEEECCCHH VERA HHCC >Mature Secondary Structure MNATVMAMLLIAVHVMICVLLCVLSRVGVLRVEGRLLPFMLLVPLWGPLCVLLLHASTLI CCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH RSGEHTVPGLEQMRVDDEERRSILVGERADFANTVPLEEALIVNDSSQRRSLVMSILNDN HCCCCCCCCHHHHCCCCHHHHHEEECCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCC PSRYIDVLSQARLNEDVEVVHYAATALAQISAKEDLALQRCRNDYLQHRNSETMLERYCD HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH ALERYVNSGIAQGYALQLQKQRYAEVLQERLRQHGDYHVACRLAQMQIDLGLFDDAAHTV HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHCCCCCCCCHHHHH DGAMERWPDQGDVWLMRLRLDAARNDGDALHQTVQQIESKHIYLGGQGRRALRFWTGTKE HHHHHHCCCCCCEEEEEEEHHHCCCCCHHHHHHHHHHHHCEEEECCCCCEEEEEECCCHH VERA HHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA