| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691527
Identifier: 213691527
GI number: 213691527
Start: 718106
End: 719983
Strand: Direct
Name: 213691527
Synonym: Blon_0628
Alternate gene names: NA
Gene position: 718106-719983 (Clockwise)
Preceding gene: 213691526
Following gene: 213691528
Centisome position: 25.35
GC content: 53.19
Gene sequence:
>1878_bases ATGACCAGAGGATTCCTGTCAGACGTGTTGGCCAAGTGGAAGCGATTCCGCTGGCAAGGTCTGGTCAAAGTCTGGGCCAT GTTCATGGCCATCGCTTTGGTGTTGCTGGTGGAGAGCCTGGGCGTGCATTACGGTGCAACGCGGTTCGACATCACCTACT TGGATCGAGACAAAGCCATTCCAGCAGCCGACGCCATCGCTGGCGAAAAAGCCACGAACCTTTTGGTGATCGACAGTTCG CAGGAGGGTGTCTCCGATGCTGAAAGCATGCTTGACCGTGTGCTTCTTGACATGAAAGTGCCCACTGTCACCGTCGATCT TGCGCAAGGTGACGAGATTCCTACGTTGAAGCAGTATCAGACGATGGTGATTGCCATGCCCGACTTGGATCCGTTGGGCG AACATGTGCTGCAGATCATGCAATGGGTCAAAAAGGGCGGCGGCGTCATGTTCGCCATGACCCCGGAGAAAACCGGCTAT CTGGATGTGATCGGCCCGCAGATCGGCATTGAATCGTCCGCATACAAATATGTGGTGACTGAGGGCATCACACCGTCCAA GGATTTTATGTTGGGTGGCGGTCAGACATACATGTTCAGTGACCCGTTCAAATCGTCGCTGAGCGTCACGTTGAATGATC GTGCACAGGTGGAGGCGGTCAGCAGCAATGGCAGAACGCCATTGGTGTGGAGGAGCTCGGTGGAGTCAGGAACGGCTGTG ATGTGCAATATCGGCATTTACGTCAAGATGGTTCGAGGATTTTACGCTTCGGCGTTCAGTCTGCTCAGTTCCGCCATGGC CTATCCGGTGATTAACAGCGCGGCTTTCTACCTGGACGATTTTCCGTCTCCAGTACCGTCTGGCAATGGCAAATACATCA AACGTGACTACAACATGAGCATTTCCGAATTCTATTCTCAAGTATGGTGGCCAGATTTGGTGCGTCTTGCGGAACGGTAC GGTATTCGTTTCACCGGTGTGATGATTGAGAATTACGGCGATGACACCAAGAATGATCCTGTACGGCAGACGGACAACAC ACAATTCGAGTATTACGGAGGATTGCTGCTTCGGCAAAACGGCGAAATCGGATATCACGGGTACAACCATCAGCCGTTGG TGTTGCCGAATACGGATTACGGCAACGAATACACGTACGTGCAATGGCCGAATCGTAAAGCCATCGTCGATTCGTTGAAC GAACTGATTGCCTTTCAAAAGACAGTGCTTCCCGCTGCGACATCGTCGGTCTATGTGCCGCCGTCCAATATTCTTTCCAG TGAAGGCCGCCAAATCATCGGTGAGGATGTGCCTCAGATTCGTGCCATCGCCAGCATGGCCTTTCCTCCCGACAGTTCTC TGGAGTATGTGCAGGAGTTCGGCGTGGCAGCCGATGGTGTGGTTGAAGCTCCCCGTATTGTGTCGGGAAGCATGGTGAAT AATTCATACATGCGTCTTGCCGCGGTTTCCGAACTGAACATGCACTATGTGAGCACGCACTTCATGCATCCCGACGATCT GCTTGATGAAGATCGTGGCGCGAAAGAAGGTTGGGAAACCTATCGCAAGGGATTAGAAGATTATTTGGATTGGTTGGAAC AGTCGGCTCCGTCCATTCGTATGCAGACTGGAACGGAATGCGCTGCGGCGGTGCAGCGATTCTCAGGATTGACGGTTTCG ATGGCAACGTCCGATGATAGTTGGGATTTGCATCTTGGCAACCTTATCGATCAGGGCTGGCTCATGTTCCGTGCGAACAA TGGCACGCCTGGCAGGGTTCGTGGCGGAAGCCTCACCAAGCTGACCGGGAATCTGTATCTGCTCAAAGCCACGAGCGCCA CGGTTCATATCGAACGCAAGACCGGGGGAGAGGCATGA
Upstream 100 bases:
>100_bases ATCAAACCGTTCAGCAGATCGAAAGCAAACATATTTATCTCGGTGGCCAGGGAAGACGAGCTCTGCGGTTCTGGACTGGA ACCAAGGAGGTTGAACGCGC
Downstream 100 bases:
>100_bases GAATCTGCCTGGTTTTGGAAGGATGCTACCCGTACGTGCATGGTGGCGTGTCCACGTGGATGCATAGTTATATCGAAGCG ATGAAAGAGCACGAGTTCGT
Product: membrane protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 625; Mature: 624
Protein sequence:
>625_residues MTRGFLSDVLAKWKRFRWQGLVKVWAMFMAIALVLLVESLGVHYGATRFDITYLDRDKAIPAADAIAGEKATNLLVIDSS QEGVSDAESMLDRVLLDMKVPTVTVDLAQGDEIPTLKQYQTMVIAMPDLDPLGEHVLQIMQWVKKGGGVMFAMTPEKTGY LDVIGPQIGIESSAYKYVVTEGITPSKDFMLGGGQTYMFSDPFKSSLSVTLNDRAQVEAVSSNGRTPLVWRSSVESGTAV MCNIGIYVKMVRGFYASAFSLLSSAMAYPVINSAAFYLDDFPSPVPSGNGKYIKRDYNMSISEFYSQVWWPDLVRLAERY GIRFTGVMIENYGDDTKNDPVRQTDNTQFEYYGGLLLRQNGEIGYHGYNHQPLVLPNTDYGNEYTYVQWPNRKAIVDSLN ELIAFQKTVLPAATSSVYVPPSNILSSEGRQIIGEDVPQIRAIASMAFPPDSSLEYVQEFGVAADGVVEAPRIVSGSMVN NSYMRLAAVSELNMHYVSTHFMHPDDLLDEDRGAKEGWETYRKGLEDYLDWLEQSAPSIRMQTGTECAAAVQRFSGLTVS MATSDDSWDLHLGNLIDQGWLMFRANNGTPGRVRGGSLTKLTGNLYLLKATSATVHIERKTGGEA
Sequences:
>Translated_625_residues MTRGFLSDVLAKWKRFRWQGLVKVWAMFMAIALVLLVESLGVHYGATRFDITYLDRDKAIPAADAIAGEKATNLLVIDSS QEGVSDAESMLDRVLLDMKVPTVTVDLAQGDEIPTLKQYQTMVIAMPDLDPLGEHVLQIMQWVKKGGGVMFAMTPEKTGY LDVIGPQIGIESSAYKYVVTEGITPSKDFMLGGGQTYMFSDPFKSSLSVTLNDRAQVEAVSSNGRTPLVWRSSVESGTAV MCNIGIYVKMVRGFYASAFSLLSSAMAYPVINSAAFYLDDFPSPVPSGNGKYIKRDYNMSISEFYSQVWWPDLVRLAERY GIRFTGVMIENYGDDTKNDPVRQTDNTQFEYYGGLLLRQNGEIGYHGYNHQPLVLPNTDYGNEYTYVQWPNRKAIVDSLN ELIAFQKTVLPAATSSVYVPPSNILSSEGRQIIGEDVPQIRAIASMAFPPDSSLEYVQEFGVAADGVVEAPRIVSGSMVN NSYMRLAAVSELNMHYVSTHFMHPDDLLDEDRGAKEGWETYRKGLEDYLDWLEQSAPSIRMQTGTECAAAVQRFSGLTVS MATSDDSWDLHLGNLIDQGWLMFRANNGTPGRVRGGSLTKLTGNLYLLKATSATVHIERKTGGEA >Mature_624_residues TRGFLSDVLAKWKRFRWQGLVKVWAMFMAIALVLLVESLGVHYGATRFDITYLDRDKAIPAADAIAGEKATNLLVIDSSQ EGVSDAESMLDRVLLDMKVPTVTVDLAQGDEIPTLKQYQTMVIAMPDLDPLGEHVLQIMQWVKKGGGVMFAMTPEKTGYL DVIGPQIGIESSAYKYVVTEGITPSKDFMLGGGQTYMFSDPFKSSLSVTLNDRAQVEAVSSNGRTPLVWRSSVESGTAVM CNIGIYVKMVRGFYASAFSLLSSAMAYPVINSAAFYLDDFPSPVPSGNGKYIKRDYNMSISEFYSQVWWPDLVRLAERYG IRFTGVMIENYGDDTKNDPVRQTDNTQFEYYGGLLLRQNGEIGYHGYNHQPLVLPNTDYGNEYTYVQWPNRKAIVDSLNE LIAFQKTVLPAATSSVYVPPSNILSSEGRQIIGEDVPQIRAIASMAFPPDSSLEYVQEFGVAADGVVEAPRIVSGSMVNN SYMRLAAVSELNMHYVSTHFMHPDDLLDEDRGAKEGWETYRKGLEDYLDWLEQSAPSIRMQTGTECAAAVQRFSGLTVSM ATSDDSWDLHLGNLIDQGWLMFRANNGTPGRVRGGSLTKLTGNLYLLKATSATVHIERKTGGEA
Specific function: Unknown
COG id: COG4878
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69189; Mature: 69058
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRGFLSDVLAKWKRFRWQGLVKVWAMFMAIALVLLVESLGVHYGATRFDITYLDRDKAI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCC PAADAIAGEKATNLLVIDSSQEGVSDAESMLDRVLLDMKVPTVTVDLAQGDEIPTLKQYQ CCHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHCC TMVIAMPDLDPLGEHVLQIMQWVKKGGGVMFAMTPEKTGYLDVIGPQIGIESSAYKYVVT EEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCCCCCCCCEEEEEE EGITPSKDFMLGGGQTYMFSDPFKSSLSVTLNDRAQVEAVSSNGRTPLVWRSSVESGTAV CCCCCCCCEEEECCCEEEECCCCCCCEEEEECCCCEEEEECCCCCCCEEECCCCCCCCEE MCNIGIYVKMVRGFYASAFSLLSSAMAYPVINSAAFYLDDFPSPVPSGNGKYIKRDYNMS EEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCEEEEECCCC ISEFYSQVWWPDLVRLAERYGIRFTGVMIENYGDDTKNDPVRQTDNTQFEYYGGLLLRQN HHHHHHHHCCHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEECCEEEEEC GEIGYHGYNHQPLVLPNTDYGNEYTYVQWPNRKAIVDSLNELIAFQKTVLPAATSSVYVP CCEEECCCCCCEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCEEECC PSNILSSEGRQIIGEDVPQIRAIASMAFPPDSSLEYVQEFGVAADGVVEAPRIVSGSMVN CHHHHHHCCCCHHHCCCHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCEEECCEEC NSYMRLAAVSELNMHYVSTHFMHPDDLLDEDRGAKEGWETYRKGLEDYLDWLEQSAPSIR CCEEEEEEHHHCCEEEEEEECCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEE MQTGTECAAAVQRFSGLTVSMATSDDSWDLHLGNLIDQGWLMFRANNGTPGRVRGGSLTK ECCCCHHHHHHHHHCCCEEEEECCCCCCEEECCCCCCCCEEEEEECCCCCCCCCCCCEEE LTGNLYLLKATSATVHIERKTGGEA EECCEEEEEECCEEEEEEECCCCCC >Mature Secondary Structure TRGFLSDVLAKWKRFRWQGLVKVWAMFMAIALVLLVESLGVHYGATRFDITYLDRDKAI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCC PAADAIAGEKATNLLVIDSSQEGVSDAESMLDRVLLDMKVPTVTVDLAQGDEIPTLKQYQ CCHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHCC TMVIAMPDLDPLGEHVLQIMQWVKKGGGVMFAMTPEKTGYLDVIGPQIGIESSAYKYVVT EEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCCCCCCCCEEEEEE EGITPSKDFMLGGGQTYMFSDPFKSSLSVTLNDRAQVEAVSSNGRTPLVWRSSVESGTAV CCCCCCCCEEEECCCEEEECCCCCCCEEEEECCCCEEEEECCCCCCCEEECCCCCCCCEE MCNIGIYVKMVRGFYASAFSLLSSAMAYPVINSAAFYLDDFPSPVPSGNGKYIKRDYNMS EEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCEEEEECCCC ISEFYSQVWWPDLVRLAERYGIRFTGVMIENYGDDTKNDPVRQTDNTQFEYYGGLLLRQN HHHHHHHHCCHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEECCEEEEEC GEIGYHGYNHQPLVLPNTDYGNEYTYVQWPNRKAIVDSLNELIAFQKTVLPAATSSVYVP CCEEECCCCCCEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCEEECC PSNILSSEGRQIIGEDVPQIRAIASMAFPPDSSLEYVQEFGVAADGVVEAPRIVSGSMVN CHHHHHHCCCCHHHCCCHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCEEECCEEC NSYMRLAAVSELNMHYVSTHFMHPDDLLDEDRGAKEGWETYRKGLEDYLDWLEQSAPSIR CCEEEEEEHHHCCEEEEEEECCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEE MQTGTECAAAVQRFSGLTVSMATSDDSWDLHLGNLIDQGWLMFRANNGTPGRVRGGSLTK ECCCCHHHHHHHHHCCCEEEEECCCCCCEEECCCCCCCCEEEEEECCCCCCCCCCCCEEE LTGNLYLLKATSATVHIERKTGGEA EECCEEEEEECCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA