| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is braE [H]
Identifier: 213691482
GI number: 213691482
Start: 654619
End: 655701
Strand: Direct
Name: braE [H]
Synonym: Blon_0579
Alternate gene names: 213691482
Gene position: 654619-655701 (Clockwise)
Preceding gene: 213691481
Following gene: 213691483
Centisome position: 23.11
GC content: 60.94
Gene sequence:
>1083_bases ATGAAGAAGACAATGCTTTCCACCAAACAGTCCTATCTGGTGTGCTTCATCGGCGTCCTTGCCGCATTCGGCGTTGTGAT GGCGCTGTGCGAATCCGGCTTGGCTGATTCCTACATCAAGGGCATCATGATGACCGCGTGCATCGCCATTATCATGACCA CCTCGCTGAACCTCACCATCGGCGTGCTCGGACAGCTGACGTTGGGCTGCTGCGGGTTCGAGGCCATCGGTGCCTACGTG GCTGCGCTGGCCTCCAAGTACATGGTGGCCGCTGGCATCGGCATCGATCCCACCACCCGTTTCCTGATCACCACGCTACT TGGCGGCATCGTGGCTTGCGTATTCGGCATTCTGATCGGTATCCCGGCGCTGCGTTTGCACGGCGACTACCTGGCCATCA TCACGCTGGGCTTCGGCGAGATCATTCGCGTGATCATCCAGAACCTCAAGGTCGCCGGTGGAATGGGCCTCGACAAGGGC GCCGCCGGACAGGCACTGATCGGCATTGACCGCACCGCCAACCTGTATGTCGTGTTCTGGATCATGGTGGTCACCGTGGT CGTGCTCTTCATGTTCAGTCGCTCCCGGTACGGCCGTGCCGTCAAGGCCATTCGTGATGATGAGATCGCGGCCGGCGCAT CGGGTCTGAACACCACGTATCTCAAGGTGTTGGTGTTCGCGATTTCCGCGTTCTTCGCAGGCATCGCCGGCGGTATCTTC GCCCAGTACATCGGCTCGTTGAACCCGACCATGGCCGGCTGGCTCAACTCCATTAACTACGTGATCATGGTGGTGTTCGG CGGCATGGGCTCGCTCACCGGTTCGATCGTTTCCGCCATCGGCCTGACCATCCTGCCCGAGCTGTTGCGTGCCTTCGCCG ATTACCGCATGCTCGCCTACTCGGTGGTGCTGGTGCTGGTCATGATCTTCCGCCCGCAAGGCATCTTCGGTTCGTGGGAG CTCTCGCTGCCGAGGCTGGTCAACCGCATGCTACTCCGCGGAACGGCTGGTAAAGGCGCAAAATCCGCCGCCAAGGCGGA TGCCGAGCCGGAGACCCCCGAGACCGCAACGAAGGAGGCCTGA
Upstream 100 bases:
>100_bases GCATTCTCCGATGCCATCGTGTTCGCCATCCTGATCATTGTGTTGCTCGTCAAACCGTCCGGCATCATGGGCAAGAACGA AGGGGAGAAGGTCTGATCCG
Downstream 100 bases:
>100_bases CCATGAGCGATAACAGTCAACCCATCCTCAAAGCCGAGCATCTCGGCATCACCTTCGGTGGTCTGAAGGCCGTATCCGAC TTCAACATGACCATCAACAA
Product: inner-membrane translocator
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 360; Mature: 360
Protein sequence:
>360_residues MKKTMLSTKQSYLVCFIGVLAAFGVVMALCESGLADSYIKGIMMTACIAIIMTTSLNLTIGVLGQLTLGCCGFEAIGAYV AALASKYMVAAGIGIDPTTRFLITTLLGGIVACVFGILIGIPALRLHGDYLAIITLGFGEIIRVIIQNLKVAGGMGLDKG AAGQALIGIDRTANLYVVFWIMVVTVVVLFMFSRSRYGRAVKAIRDDEIAAGASGLNTTYLKVLVFAISAFFAGIAGGIF AQYIGSLNPTMAGWLNSINYVIMVVFGGMGSLTGSIVSAIGLTILPELLRAFADYRMLAYSVVLVLVMIFRPQGIFGSWE LSLPRLVNRMLLRGTAGKGAKSAAKADAEPETPETATKEA
Sequences:
>Translated_360_residues MKKTMLSTKQSYLVCFIGVLAAFGVVMALCESGLADSYIKGIMMTACIAIIMTTSLNLTIGVLGQLTLGCCGFEAIGAYV AALASKYMVAAGIGIDPTTRFLITTLLGGIVACVFGILIGIPALRLHGDYLAIITLGFGEIIRVIIQNLKVAGGMGLDKG AAGQALIGIDRTANLYVVFWIMVVTVVVLFMFSRSRYGRAVKAIRDDEIAAGASGLNTTYLKVLVFAISAFFAGIAGGIF AQYIGSLNPTMAGWLNSINYVIMVVFGGMGSLTGSIVSAIGLTILPELLRAFADYRMLAYSVVLVLVMIFRPQGIFGSWE LSLPRLVNRMLLRGTAGKGAKSAAKADAEPETPETATKEA >Mature_360_residues MKKTMLSTKQSYLVCFIGVLAAFGVVMALCESGLADSYIKGIMMTACIAIIMTTSLNLTIGVLGQLTLGCCGFEAIGAYV AALASKYMVAAGIGIDPTTRFLITTLLGGIVACVFGILIGIPALRLHGDYLAIITLGFGEIIRVIIQNLKVAGGMGLDKG AAGQALIGIDRTANLYVVFWIMVVTVVVLFMFSRSRYGRAVKAIRDDEIAAGASGLNTTYLKVLVFAISAFFAGIAGGIF AQYIGSLNPTMAGWLNSINYVIMVVFGGMGSLTGSIVSAIGLTILPELLRAFADYRMLAYSVVLVLVMIFRPQGIFGSWE LSLPRLVNRMLLRGTAGKGAKSAAKADAEPETPETATKEA
Specific function: Component of the high affinity leucine, isoleucine, valine, transport system (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: COG4177
COG function: function code E; ABC-type branched-chain amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. LivHM subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789865, Length=322, Percent_Identity=36.6459627329193, Blast_Score=148, Evalue=6e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 - InterPro: IPR021807 [H]
Pfam domain/function: PF02653 BPD_transp_2; PF11862 DUF3382 [H]
EC number: NA
Molecular weight: Translated: 37948; Mature: 37948
Theoretical pI: Translated: 9.29; Mature: 9.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTMLSTKQSYLVCFIGVLAAFGVVMALCESGLADSYIKGIMMTACIAIIMTTSLNLTI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHH GVLGQLTLGCCGFEAIGAYVAALASKYMVAAGIGIDPTTRFLITTLLGGIVACVFGILIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHC IPALRLHGDYLAIITLGFGEIIRVIIQNLKVAGGMGLDKGAAGQALIGIDRTANLYVVFW CCHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHHHHH IMVVTVVVLFMFSRSRYGRAVKAIRDDEIAAGASGLNTTYLKVLVFAISAFFAGIAGGIF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH AQYIGSLNPTMAGWLNSINYVIMVVFGGMGSLTGSIVSAIGLTILPELLRAFADYRMLAY HHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SVVLVLVMIFRPQGIFGSWELSLPRLVNRMLLRGTAGKGAKSAAKADAEPETPETATKEA HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MKKTMLSTKQSYLVCFIGVLAAFGVVMALCESGLADSYIKGIMMTACIAIIMTTSLNLTI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHH GVLGQLTLGCCGFEAIGAYVAALASKYMVAAGIGIDPTTRFLITTLLGGIVACVFGILIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHC IPALRLHGDYLAIITLGFGEIIRVIIQNLKVAGGMGLDKGAAGQALIGIDRTANLYVVFW CCHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHHHHH IMVVTVVVLFMFSRSRYGRAVKAIRDDEIAAGASGLNTTYLKVLVFAISAFFAGIAGGIF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH AQYIGSLNPTMAGWLNSINYVIMVVFGGMGSLTGSIVSAIGLTILPELLRAFADYRMLAY HHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SVVLVLVMIFRPQGIFGSWELSLPRLVNRMLLRGTAGKGAKSAAKADAEPETPETATKEA HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2120183; 10984043 [H]